New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 315435140 (0.740)3 (0.060) 3/466 NT 7.2% coding (866/957 nt) yqhC transcriptional activator of yqhD
?NC_000913 = 3154364 39 (0.750)coding (853/957 nt) yqhC transcriptional activator of yqhD

GATTCCGTTCGTTAAACGCCATGAAGATCAGGTAATGACGTTCCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCACGCGGCTAATCAGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGC  >  NC_000913/3154091‑3154633
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                             
gATTCCGTTCGTTAAACGCCATGAAGATCAGGTAATGACGTTCCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACCCCGAAGTAACGTTTAAACTCACGGCTAAATTGCGCTGCGCTTTCCTAGCCGAc                                                                                                                                                                                                                                                                               >  1:57734/1‑274 (MQ=255)
     cgttcgttAAACGCCATGAAGATCAGGTAATGACGTTCCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTACACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACgcgca                                                                                                                                                                                                                                                                          <  2:95452‑M2/274‑6 (MQ=255)
                    aTGAAGATCAGGTAATGACGTTCCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGCAGTAACGTTTAAACCCACGGCCAAATTGCGCTGCGCTTTCATAGCCGACGCGCATCgctgcccggct                                                                                                                                                                                                                                                             >  2:4851/1‑266 (MQ=255)
                               gTAATGACGTTCCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCCCACCGCAGTACCGTTTAAACTCACGGCTACATTGCGCTGCGCTTTCCTAGCCGACGCGCATCCCTCCTGCGCTGCCCTCCCTTCCGt                                                                                                                                                                                                                                               >  2:131144/1‑275 (MQ=255)
                                      cGTTCCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGga                                                                                                                                                                                                                                         <  1:299248/274‑1 (MQ=255)
                                                 atgtgtatgagaaacaggTTAGCCGTTGGCTTTGTAGGACCGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCGGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATcc                                                                                                                                                                                                                             <  2:5048/258‑1 (MQ=255)
                                                 atCCTGCCAATTGCCTTGTTAACCGCGGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATACTGTACCGCCGGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATcc                                                                                                                                                                                                                             <  1:79939/275‑1 (MQ=255)
                                                                             gCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTAACGGCCAACTTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCCTGCCGTCATGGACGATGCTCAACCCCCCCTTTTGcctgcctcttattcccat                                                                                                                                                                                                 >  1:5048/1‑258 (MQ=255)
                                                                                       cACGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCCCGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCAGGCCGTGATGGACTATCATCCACCGCGCCTTATGAAGACGGTAACTTTTTAAAtcacgc                                                                                                                                                                                          >  2:208219/1‑267 (MQ=255)
                                                                                            tGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGACGTAACGTTTAAACTCACGGCTAAATTTCGATGCGCTTTCATAGCCGACGCGCATCGCCGCTGCGCTGCCCTTCATGCCGTCATTGATGATCATCATCCGCGCCTTTTGCCGCCGGTAATTCTTCAAATCTTGTAACGGCgc                                                                                                                                                                                  >  2:482700/1‑274 (MQ=255)
                                                                                                      gATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCCGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTCTCCACGCGGTAATTCTTCAAATACTCCAACGGCGAGGTACTGGTg                                                                                                                                                                        >  2:9513/1‑275 (MQ=255)
                                                                                                      gATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCAATGCGCTTTCATAGCAGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGGTCATCATCCGCGCCTTCTTCAGACGGTCATTCTTCAAATACTGCAACGCCACGGTACTg                                                                                                                                                                           >  1:276977/1‑272 (MQ=255)
                                                                                                       aTTAAAAAAAAATACTGTCACCCCTGGCGATTTTCCCCGTTCCCGGTTGCTGTCCCGGGAACCTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGa                                                                                                                                                                       <  2:276976/275‑1 (MQ=255)
                                                                                                          aaaaaaaaaTACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACa                                                                                                                                                                     <  1:4851/274‑1 (MQ=255)
                                                                                                                  aTACTGTAACGCCTGACGTTTTTCCCCGTTCCCGGTTGCTTGACCCGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCCCACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTaaaa                                                                                                                                                            <  2:124262/275‑1 (MQ=255)
                                                                                                                                gACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCACCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCCGACGGTAATCCTTCAAATACTGACACGGCGAGGTACGGGTGCCAGACTTAAAATTATGGTGGAACGc                                                                                                                                              >  2:29101/1‑275 (MQ=255)
                                                                                                                                gACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATAGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTACTGCCGTCATGGACGATTATACTCCGCGCCTTATGCAGACGGTAAATCTTCAAATACTGCAAAGGCGAGGAACTTGTTACCGGCTTAAAATTTTGGTGGAACGc                                                                                                                                              >  2:367531/1‑275 (MQ=255)
                                                                                                                                                                    cGTATTTAATTCCCCTGCATCGGCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTc                                                                                                          <  1:443251/275‑1 (MQ=255)
                                                                                                                                                                               ccccTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAAc                                                                                                                                                >  2:316077/1‑226 (MQ=255)
                                                                                                                                                                                cccTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTTCCGCCAGTTTCCCGACCCTCAGGtt                                                                                              >  2:253952/1‑275 (MQ=255)
                                                                                                                                                                                  cTGCATCCCCCGCATTCTTGCGGAGTCTTCACCCGGCGTCAAACCAAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGtttt                                                                                            <  1:131145/275‑1 (MQ=255)
                                                                                                                                                                                   tGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCg                                                                                                                                            <  1:316078/226‑1 (MQ=255)
                                                                                                                                                                                     cttCGCCCGCGTTCTGGCCGCATCTTCCCCCGGCGGCACACCGACGTAACGTTTAAACGCACGGCTGAATTGCGATGCGCTTTCATTGCCGACGCTCATCGCTGCTGGGCTGGCCTTCATTCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCgg                                                                                         <  2:384592/273‑1 (MQ=255)
                                                                                                                                                                                     cATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTACCGTTTAAACTCACTGCTAAATTGCGATGCGCTTTCATAGCCTACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCgg                                                                                         <  1:206902/275‑1 (MQ=255)
                                                                                                                                                                                          cccGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGGTGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAACATTATGGTGGAACGCCGATACGCCCATGTTGGCTTCTGCCGCCCGTTGCCCGCCGCTCCGGTTTTCGGTGtat                                                                                    >  2:91959/1‑275 (MQ=255)
                                                                                                                                                                                          cccGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAAc                                                                                                                                                                                       >  1:216171/1‑176 (MQ=255)
                                                                                                                                                                                            cGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCGTCGGCTATGAAAgcgcatcccaatttagccgtgaggttaaacgttacttcggtgtgacgccgggggaagatgcggcgagaatgcgggcgatgcaggggaattaaatacgttcccagtacggcaaccgggaacggggacaagccgcgggcgttacagtagttttttttaatcaccaacaaccgcgtgcctaacaaaccagag                                                                                  <  2:171505‑M2/275‑190 (MQ=255)
                                                                                                                                                                                              cATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCg                                                                                                                                                                                   <  2:216170/176‑1 (MQ=255)
                                                                                                                                                                                               aTTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCGTCGGCTATGAAAgcgcatcgcaatttagccgtgagtttaaacgttacttcggggtgacgccgggggaagacgcggcaagaatgcgggcgatgcaggggaattaaatacgttcccggtacagcaaccggggacgagggaaatcgtcaggcgtacagtatttttttttaatcactccaaacagcgtgactaacaaaccaccggtt                                                                                <  1:324152‑M2/274‑192 (MQ=255)
                                                                                                                                                                                                     gCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACCGACTTAAACTTATGGTGGAACGCCGATCCGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCATGTTCTCGGCGTATCTATtcttact                                                                         >  1:291472/1‑271 (MQ=255)
                                                                                                                                                                                                                ccccGGCGTCCCACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCa                                                              <  1:9513/275‑1 (MQ=255)
                                                                                                                                                                                                                    tccGTCACACCGAATGAACGTTTAAACTCACGGCTATATTGCGATGCTCTTTCATAGCCTACCCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTAGGCAGACGGTAATTCTTCAAAGACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCAcgcg                                                          <  1:253953/273‑1 (MQ=255)
                                                                                                                                                                                                                           gaccGCAGTAACGTTCAAACTCACGTATAGAGTGCGATGCGCGTCGGCGATGAAagagcagcgcaatttagccgggagttaaaaagttacgtcggtgtggcgccgggggaagatgcggcaagaatgcgggcgatgcaggggaattaaatacgttcccggtacagcaaccgggaacggggaaaatcgtcaggcgttacagtatttttttttaatcaccacaaacagcgtgcctaacaagccagcggttaacaaggcaattggcaggatcatcagga                                                  >  1:171506‑M2/2‑54 (MQ=255)
                                                                                                                                                                                                                              cGAAGTAACGTTTAAACTCCAGGCTAAATTTCGATGCGCTTTCCTGTCCGACGCGCAGCGCTGCTGCGCTGGCCTTCAGGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCACGCGGCTAATCAGa                                                <  1:525402/275‑1 (MQ=255)
                                                                                                                                                                                                                                        tttAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCACGCGGCTAATCAGACTGAAGTGAg                                      >  2:338848/1‑275 (MQ=255)
                                                                                                                                                                                                                                          tAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCACGCGGCTAATCAGACTGAAGTGAGt                                     >  1:56556/1‑274 (MQ=255)
                                                                                                                                                                                                                                                 aCGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTc                                                                  >  2:241459/1‑238 (MQ=255)
                                                                                                                                                                                                                                                 aCGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAAAGCCGATACGCTCATGTTGGCTTCTGCAGACAGTTGCTAGACGCTCAGGTTTTCGGTGTATTTATTGTCAATCCGTTTCAGTACGCGGATAATCAGACTGAAGTGAGTCTGGCGat                             >  1:198425/1‑274 (MQ=255)
                                                                                                                                                                                                                                                   agcgcagcagCGATGCGCTTTCATAGCCGACGCCCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCCTCCGCGCCTTATGCAGACGGTACTTCTTCCAATACTTCAACGGCGCGGTACTGGTCACAGCCCTAAAATTATGTTGGAACCCCCATCGGCTCATTTTGGCTTCTGCCGCCCGTTCCTCGACGCTCAGGTTTTCGGTGTCTTCCTTCTCAATCCGCTTCAGCCCGCGTCTCATCCGACTGAAGTGatgtttgcgact                            >  2:292781/10‑263 (MQ=255)
                                                                                                                                                                                                                                                     cTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCa                                                              <  1:241460/238‑1 (MQ=255)
                                                                                                                                                                                                                                                     cTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCACGCGGCTAATCAGACTGAAGTGAGTCTGGCgctggtc                         <  1:95453/275‑7 (MQ=255)
                                                                                                                                                                                                                                                               aTGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCACGCGGCTAATCAGACTGAAGTGAGTCTGGCGACt                            >  2:326525/1‑262 (MQ=255)
                                                                                                                                                                                                                                                               aTGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCACGCGGCTAATCAGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGt               >  2:151652/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                   gcTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCACGCGGCTAATCAGACTGAAGTGAGTCTGGCGACTGAcc                        <  1:326526/262‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCACGCGGCTAATCAGACTGAAGTGAGTCTGGCGAATGACCAGGGCCAGTAAcg           >  1:290248/1‑274 (MQ=255)
                                                                                                                                                                                                                                                                             ccGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCACGCGGCTAATCAGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGcgccgccgc  <  1:338849/274‑1 (MQ=255)
                                                                                                                                                                                                                                                                             ccGACCCGCATCGCTGCTGCGCTGGCCTTCATTCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGTTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCACGCGGCTAATCAGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGcgccgccgc  <  1:367532/274‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                             
GATTCCGTTCGTTAAACGCCATGAAGATCAGGTAATGACGTTCCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGTTTAAACTCACGGCTAAATTGCGATGCGCTTTCATAGCCGACGCGCATCGCTGCTGCGCTGGCCTTCATGCCGTCATGGATGATCATCATCCGCGCCTTATGCAGACGGTAATTCTTCAAATACTGCAACGGCGAGGTACTGGTGACAGACTTAAAATTATGGTGGAACGCCGATACGCTCATGTTGGCTTCTGCCGCCAGTTGCTCGACGCTCAGGTTTTCGGTGTATTTATTCTCAATCCGTTTCAGCACGCGGCTAATCAGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGC  >  NC_000913/3154091‑3154633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.