New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288917 =NA (NA)66 (0.960) 53/284 0.2 90.4% intergenic (‑5/+146) yejO/insH1 pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system/IS5 transposase and trans‑activator
?NC_000913 3526447 = 7 (0.100)intergenic (‑300/‑20) nudE/yrfF adenosine nucleotide hydrolase, Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

Only 100 of 142 total aligned reads displayed.

TGATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAA  >  NC_000913/3526305‑3526589
                                                                                                                                              |                                                                                                                                              
tGATAGTCCGCCGTCAGACGGTTTGCTATGATCAGCGGTTACTGCAATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTCGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGAc                                                                                                                                                <  2:1046313/143‑1 (MQ=255)
   tatTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGTCTGACCACGCCCGCCAGACtca                                                                                                                                             >  2:462789/1‑141 (MQ=255)
   tatTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGGTACTGTGATGTGCTTAATAATGCTCAAGTTAGACTGCACGCTTGCCGATAGCCCACCGCAGAATCATGTATTGTGTCCGGCGCGACTGACCACGCCTCCCAGACtaa                                                                                                                                             >  2:6101/1‑143 (MQ=255)
    gttcCGGCTGCAGAGCGGTTGCTATGAGCAGCGGGTACTGTGATGTGCGTAATGATGCTCAAGTTAAACGCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAG                                                                                                                                            >  2:741561‑M2/2‑143 (MQ=255)
    aTTCCGCCTTCCGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAG                                                                                                                                            >  1:1017759‑M2/1‑143 (MQ=255)
     ttCCGCTTGCAGAGTATCTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCCCAAGTTAAACTCCACGCTCGCCGATAGCCAACCGCATAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGg                                                                                                                                           >  1:892796‑M2/1‑142 (MQ=255)
       ccGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACtcagcac                                                                                                                                         >  1:683095/1‑140 (MQ=255)
            ttCAGAGGGTTTGCTATGATAAGCGCTCAGGGGGATGTTCTCAATGATGCTAACCTGGAAGCCCAGGATTGCGACTAGCGAACCGCAGAATCATTCACTGTGTCCGGTGCAACTAACTACGCCAAACAGACtaagaactgtcc                                                                                                                                    >  1:852519/1‑135 (MQ=255)
                  gggTTTGCTATGATCAGCGGTTCCTGTGATGTGCTTAATGATGCTCAAGTTAACCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaa                                                                                                                              >  1:922870‑M2/1‑129 (MQ=255)
                     tttGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACAACGCCTGACAGACTAAGggaggtgcgtacaagta                                                                                                                           <  2:319245‑M2/143‑18 (MQ=255)
                      ttGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtcc                                                                                                                          >  2:569398‑M2/1‑125 (MQ=255)
                      gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATg                                                                                                                          >  2:501619‑M2/121‑143 (MQ=255)
                       aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaactagcgttagatgggaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGa                                                                                                                         <  2:274166‑M2/24‑1 (MQ=255)
                        gCTATGATCAGCGGTTTCTGTGATGTGCTTAATTATTCTCAAGTTAAACTCCACGCTCGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCCCGCCTGACAGACTAAGgaaggtgcgaacaagtccct                                                                                                                        >  1:361716‑M2/1‑123 (MQ=255)
                          tATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGACAGCCAACCGCAGAATCCTGCAAAAACTCCTCGGGGGCTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctga                                                                                                                      <  2:553746‑M2/143‑23 (MQ=255)
                               tCAGCGGTTACTGTGATGTGCTGAATGATGCTCAAGTTAACCTCCCCGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatga                                                                                                                 >  1:209973‑M2/1‑116 (MQ=255)
                               gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCAccagt                                                                                                                 >  1:89600‑M2/112‑141 (MQ=255)
                                 ctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATtgt                                                                                                               <  1:124921‑M2/34‑1 (MQ=255)
                                  taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGAAGGGGAAAGCATGAGCACCAAtgtg                                                                                                              >  1:989390‑M2/109‑143 (MQ=255)
                                   cGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatc                                                                                                             >  2:1050838‑M2/1‑112 (MQ=255)
                                   cGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatc                                                                                                             >  2:401644‑M2/1‑112 (MQ=255)
                                      ttACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatg                                                                                                          <  1:510450‑M2/143‑35 (MQ=255)
                                         cTGGGATGTGCTTAATGATGCTCCAGTTAAACTCCACGCGTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCTGTGCGACTGACCACGCCTGACAGACTTAGgaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                       >  1:329962‑M2/1‑106 (MQ=255)
                                          tgtgATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGAACACGCCTGACAGACTGAGgaaggtgcgcacaaggacctgatatgagatactgtcgc                                                                                                      <  1:962779‑M2/143‑39 (MQ=255)
                                           tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgcaatgaatgaggcagccgagcagcatttccccgcttattcgcaccttccCTAAGTCAGATGGGGAAAGCATGAGCGCCATTGTGATTTTTTTa                                                                                                     >  2:277902‑M2/100‑143 (MQ=255)
                                           tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgtctgagtcagccgagaagaatatccccgcgtattcgcgccttccCGAAGTAAGATGGGGAAAGCATGAGCACCATTGTGattttgttc                                                                                                     >  2:165096‑M2/100‑142 (MQ=255)
                                           tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAGGATGGGGAAAGCATGAGCACCATTGTGAGTTTTTTa                                                                                                     >  2:365241‑M2/100‑143 (MQ=255)
                                            tgATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtc                                                                                                    <  2:147251‑M2/143‑41 (MQ=255)
                                             attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAgc                                                                                                   <  2:846223‑M2/46‑1 (MQ=255)
                                             attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagacagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAgc                                                                                                   >  2:756487‑M2/98‑143 (MQ=255)
                                              ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcgTTTTGCAAAACCGAGAAAGAATGAGCACCATTGTGATTTTTTTAgct                                                                                                  >  2:1188022‑M2/97‑143 (MQ=255)
                                               tctgctTAATGATGCTCAAGTTGAACTCCCCGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                                                                 >  2:252188‑M2/3‑100 (MQ=255)
                                                gtgCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatacgagatcatgtttgtcatct                                                                                                <  1:1067035‑M2/143‑45 (MQ=255)
                                                 tgCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctcatatgcgatcatgtttctcatctg                                                                                               <  2:503338‑M2/143‑46 (MQ=255)
                                                  aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCCACATCGTGATTTTTTTAGCTGCtt                                                                                              >  1:582221‑M2/93‑143 (MQ=255)
                                                  aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCtt                                                                                              >  2:412148‑M2/93‑143 (MQ=255)
                                                  agccatttacggtagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCtt                                                                                              <  2:1091631‑M2/51‑1 (MQ=255)
                                                    ttAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACGGGGGGTTCAGTTACTCTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                                                            >  2:552600‑M2/1‑95 (MQ=255)
                                                            gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGAACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTg                                                                                    >  1:661265‑M2/83‑143 (MQ=255)
                                                            gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcaCTTAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTTGCTGCTTTGCTGGCCTg                                                                                    >  2:1195016‑M2/83‑143 (MQ=255)
                                                            gCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTACGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcgtgtggagccatagaa                                                                                    <  1:717991‑M2/143‑57 (MQ=255)
                                                            gCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctagagccatagaa                                                                                    <  1:199238‑M2/143‑57 (MQ=255)
                                                             ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagacgagaagaatttccccgctgattcgcaccttccCTAAGTAAGACGGGGAAAGCATGAGCACCACTCTGATGTTCTTCGCGGCTTTGCTGGcctcc                                                                                   >  1:764750‑M2/82‑141 (MQ=255)
                                                             cTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCAAGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaggtccctgatatcagatcaagtttggtatctggggccatagcgg                                                                                   <  1:1022899‑M2/143‑58 (MQ=255)
                                                              gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCCCCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCt                                                                                  >  2:838690‑M2/81‑143 (MQ=255)
                                                                gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCa                                                                                >  1:503710‑M2/79‑143 (MQ=255)
                                                                 aGTTAAGCTCCGCGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg                                                                               >  1:268442‑M2/1‑82 (MQ=255)
                                                                   ttAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                                                             <  2:972555‑M2/143‑64 (MQ=255)
                                                                        cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGc                                                                        <  2:905732‑M2/73‑1 (MQ=255)
                                                                          gctcattcaggaggaaatgcaaggactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCgg                                                                      <  1:621257‑M2/75‑1 (MQ=255)
                                                                           cACGCTTGCCGATAGCCAACCGCAGAAGCATGTATTGTGTCCGGTGCGACTGACCACGCCTGAGAGACTAAGgaaggtgcgaacaaggccctgatgtgagagcatgtttgtcatctggagccatagaacagggttcatcatga                                                                     <  2:258286‑M2/143‑72 (MQ=255)
                                                                               aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCAGATGGGGAAAGCATGAGCACCCTTGTGATTTTTTTAGCTGCTTTTCTGGCCTGCTCAATACTTGCGGGATgg                                                                 >  1:1142646‑M2/64‑143 (MQ=255)
                                                                                 catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCt                                                               <  2:693233‑M2/82‑1 (MQ=255)
                                                                                    cGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggtgccatagaaca                                                                                  <  2:806791‑M2/121‑59 (MQ=255)
                                                                                    cGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggtgccatagaaca                                                                                  >  1:806791‑M2/1‑63 (MQ=255)
                                                                                        caaggaactcactgagtcagccgagaagaattgccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                        <  1:1024461‑M2/89‑1 (MQ=255)
                                                                                        aGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac                                                        >  2:896155‑M2/1‑59 (MQ=255)
                                                                                          aggaaatgactgagtcagccgagaagaatttccccgcttattcgcaccctccCTAACTAAGATGGGGAACGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGt                                                      <  2:354842‑M2/91‑1 (MQ=255)
                                                                                             aCCGCAGAGCAATGTATTGTCTCCGGTGCGCCTGACCACGCCTGACGGACTAAGgaaggtgcgaacaagtccctgagatgagagcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg                                                   >  2:962779‑M2/1‑54 (MQ=255)
                                                                                              aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGa                                                  <  2:1090303‑M2/95‑1 (MQ=255)
                                                                                                 cAGAATCATGTATGGTGTCAGGGGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                               >  1:230561‑M2/1‑50 (MQ=255)
                                                                                                   gAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatcgccccgggttcatcatgagtcatcaacttaccttcgccgaca                                             >  2:510450‑M2/1‑48 (MQ=255)
                                                                                                   ctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAg                                             >  2:567975‑M2/44‑143 (MQ=255)
                                                                                                    tgaggcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGa                                            <  2:455981‑M2/101‑1 (MQ=255)
                                                                                                     gatgtagccgaaaataatctcccgccttattcccccctttcCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCTGGATGGCTGATAAAAGTGCGATCCAGAc                                           <  1:394964‑M2/102‑1 (MQ=255)
                                                                                                     aTCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtcactgctatgagatcaagtttggcatctggagccatagaacagggttcatcatgggtcatcaacttacctgcgccgacagt                                           <  1:78164‑M2/143‑98 (MQ=255)
                                                                                                        acgtaTTGTGTCCGGTGCGACTGACCAGGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                        >  2:991087‑M2/3‑43 (MQ=255)
                                                                                                        aTGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                        <  1:1126646‑M2/143‑101 (MQ=255)
                                                                                                        aTGTATTGGGTCCGGTGCGACTGACCACGGCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                        >  2:1010945‑M2/1‑43 (MQ=255)
                                                                                                          gTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtcccggatatgagagcatgtttgtcatctggagccatagaacagggtgcatgatgagtcatcaacgtacactcgccgacagtggatg                                      <  2:98684‑M2/143‑103 (MQ=255)
                                                                                                          gTATTGTGGCTGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                      <  1:27650‑M2/143‑103 (MQ=255)
                                                                                                           gccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCCCTACTTGCGGGATGGCTGCTCAAAGAgcgacccagcggccgtc                                     >  1:504178‑M2/36‑135 (MQ=255)
                                                                                                           gccgagaagaactgccccgctttttcgcactttccTTAAGTAAGATGGGGAAAGCATGAGCACCAGTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTc                                     <  1:1057701‑M2/108‑1 (MQ=255)
                                                                                                             ttGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgacttcag                                   <  2:155021‑M2/143‑106 (MQ=255)
                                                                                                              tgtgTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaactcagc                                  <  2:850311‑M2/143‑107 (MQ=255)
                                                                                                               gtgtCCGGGGCGACTGACCACGCCTGACAGACTAAGgtgggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaatttaccttcgccgacagtgaattcagca                                 >  1:259793‑M2/1‑36 (MQ=255)
                                                                                                                  agaatgtccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGcc                              <  2:480809‑M2/115‑1 (MQ=255)
                                                                                                                   ccGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                             <  1:438424‑M2/143‑112 (MQ=255)
                                                                                                                    aatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCt                            <  1:1188022‑M2/117‑1 (MQ=255)
                                                                                                                      tttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTgg                          <  1:956203‑M2/119‑1 (MQ=255)
                                                                                                                      tttacccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGCTGGCTGCTAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTgg                          <  2:886953‑M2/119‑1 (MQ=255)
                                                                                                                        tcccaggttattcgcagcttccCTAGGTAAGATGGGGAAAGCATGAGCACCAGTGTGATTTTTTTAGCTGCTTTGCGGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGAc                        <  2:1117558‑M2/121‑1 (MQ=255)
                                                                                                                          gACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatccacttaccttcgccgccagtgaattcagcagtgacagccgt                      <  1:468841‑M2/143‑119 (MQ=255)
                                                                                                                           ccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCTGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCaa                     <  2:1142646‑M2/124‑1 (MQ=255)
                                                                                                                           aCTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaccgtgaattcagcagtaagcgccgtc                     <  1:805543‑M2/143‑120 (MQ=255)
                                                                                                                            tgcttattagcaccttcgCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACGTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAAc                    <  1:865777‑M2/125‑1 (MQ=255)
                                                                                                                               tccaCGCTGGGCAGGCGAAGgaaggtgcgaacaagtcctttatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac                 >  1:35217‑M2/2‑20 (MQ=255)
                                                                                                                               aCTACGCCTGACAGATTAAGgaaggtgcgaacaagtccctgatatgagatcatatatgacatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac                 >  2:612899‑M2/1‑20 (MQ=255)
                                                                                                                               aCCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                                                                   <  2:482025‑M2/61‑42 (MQ=255)
                                                                                                                               aCCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                                                                   >  1:482025‑M2/1‑20 (MQ=255)
                                                                                                                                  ttcgcactttccATAAGTAAGAATGGGAAAGCATGAGCATCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGACCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTc              <  2:719617‑M2/131‑1 (MQ=255)
                                                                                                                                    cgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgc            >  1:1136155‑M2/11‑143 (MQ=255)
                                                                                                                                    cgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgc            <  2:1123921‑M2/133‑1 (MQ=255)
                                                                                                                                    cgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgc            <  1:887121‑M2/133‑1 (MQ=255)
                                                                                                                                     gcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgcg           >  2:671124‑M2/10‑143 (MQ=255)
                                                                                                                                     gcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgcg           >  2:933732‑M2/10‑143 (MQ=255)
                                                                                                                                      cTGACATACTAAGgaaggtgcgaaccagtctccgatatgagatcatgtttgtcatctggagccatagaacagggctcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa          >  2:804622‑M2/1‑13 (MQ=255)
                                                                                                                                      cTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagacatcaacttaccttcgccgacagtgaattcaaaagtaagcgctggcagacaagacaa          <  2:925144‑M2/143‑131 (MQ=255)
                                                                                                                                          tgccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATgc      <  2:408352‑M2/139‑1 (MQ=255)
                                                                                                                                              cTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCaa  >  1:148720/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                              
TGATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAA  >  NC_000913/3526305‑3526589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.