New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2313545	4 (0.050)	80 (1.040)	66/280	0.1	95.3%	coding (60/2673 nt)	rcsD	phosphotransfer intermediate protein in two‑component regulatory system with RcsBC
	?	NC_000913	2514275 =	NA (NA)					intergenic (+33/‑54)	nupC/insL1	nucleoside (except guanosine) transporter/IS186 transposase

ATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2313403‑2313545 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGG  >  NC_000913/2514275‑2514416                                                                                                                                                                                                                                                                                               ATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGACGTTTTAACAGGTCATAAACACGAATGCGTGAGAAGATGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACC                                                                                                                                                >  1:370873/1‑143     ggcAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCAGAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTTCCGGGGAGCATTACCATAA                                                                                                                                            <  2:840073/140‑1      GTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGACGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGACACGACCCGCTATTCACTCCTACCGGGGAGCATGACCATCAG                                                                                                                                           >  2:1011919/1‑143      GTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAG                                                                                                                                           >  2:170048/1‑143         AGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGC                                                                                                                                        >  1:1135648/1‑143                 GAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAA                                                                                                                                <  1:613877/143‑1                  AATTTCACACTGTACCCTTTATACTGCCCTATCACTCCGCGAAGTGTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAG                                                                                                                               <  1:758035/143‑1                   ATTTCACACTGTACCCTTTATACGGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGG                                                                                                                              <  1:396475/143‑1                      TCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTT                                                                                                                           <  1:237727/143‑1                        ACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGT                                                                                                                         <  1:754505/143‑1                         CACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTG                                                                                                                        <  1:1058825/143‑1                         CACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCCAACTTAAGGcccggt                                                                                                                        >  1:418860/1‑137                          ACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGACAGAGACAACGGCCACGCCCCGCTTTTCACTACTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGG                                                                                                                       >  1:449533/1‑143                          ACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGG                                                                                                                       <  1:1066516/143‑1                           CTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGT                                                                                                                      <  1:387434/143‑1                                    TTATACTGCCCTATCACTTCGCGAAGTTGTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCT                                                                                                             <  1:146732/143‑1                                      ATACTGCCCTATCGCTTCGCGAAGGTTTAACAGGTCATCAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGA                                                                                                           <  1:410374/143‑1                                      ATACTGCCCTATCACTGCGCGAAGTTTTACCAGGTCATAAACACGAATGCGTCAGAAAGGGACAACGGCCACGACACGCTACTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGA                                                                                                           <  2:661834/143‑1                                       TACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGGATTACGCCGGAT                                                                                                          >  2:261707/1‑143                                          TGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTT‑ACTACTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGA                                                                                                      >  1:1363763/1‑143                                            cgtgATCACCTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAT                                                                                                     <  2:871785/139‑1                                               TATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTAGTACACCTGATATGATTTc                                                                                                  >  2:882169/1‑142                                                acCACATCGCGAAGTTTTAACAGTTCACAAACACGAAAGCGTCAGAAAGAGACAACGGCCACTACCCGCCTTTCACACCTAACGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAA                                                                                                 <  1:44123/141‑1                                                ATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAA                                                                                                 >  1:174272/1‑143                                                 gcgCTTCGCGGAGTTTTAACAGGTCATAAACACGGATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCATTCCTAACGGGGAGCATTACCATAAGCGCTGACTTAAGGGTTGTGTTATTACGCCTGATATGATTTAAC                                                                                                <  2:1190527/140‑1                                                     TTCGCCAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGC                                                                                            <  1:62198/143‑1                                                      TCGCGAGGTTTTCACCGGTCATAAACACGATGGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCAGTACCAGAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCC                                                                                           <  2:505993/143‑1                                                      TCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCC                                                                                           <  1:1306340/143‑1                                                      TCGCGAAGTTGTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCC                                                                                           <  2:505452/143‑1                                                       CGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATCCGCGCTAACTTCAGGGTTGTGGTACTCCGCCTGATATGCTTTAAAGTcacg                                                                                          >  2:472320/1‑139                                                        GCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCAAGACCCGCTTTTCCCTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAGCGATCCGA                                                                                         >  2:460403/1‑143                                                         CGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTAAGCCTGAAACGTTTTTACGTTCCGAT                                                                                        >  1:843381/1‑143                                                           AAGTTTTAACTGGCGCTCAACAGGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGA                                                                                      <  2:1139358/143‑1                                                            AGTTGTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAA                                                                                     <  2:665754/143‑1                                                                TTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCCAACTTAAGGGCTGTGGTATTACGCCTGATATGCTTTAACATGCCGAcacacacc                                                                                 >  2:1313192/1‑135                                                                  AACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTC                                                                               <  2:796832/143‑1                                                                  AACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTC                                                                               <  1:356819/143‑1                                                                   tcttgttATAATCACGAAGGCGACAGAGAGGGACAGCGGCCACGACCCGCTTTTCACTCCGACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCT                                                                              <  1:177607/136‑1                                                                   ACAGGGCACAACCGCGATTGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCT                                                                              <  2:579688/143‑1                                                                     AGGTCATAAACACGACTGCGTCAGAAAGAGACAACGGCCACCGCCCGCTTTTCACTCCTACCGGGGAGCATCACCATAAGCGGTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCA                                                                            <  2:442298/143‑1                                                                      ggaCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAC                                                                           <  1:117962/140‑1                                                                      GGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCcc                                                                           >  1:864401/1‑141                                                                       GTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTCCCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACATGACGATGAATTACTCTCACG                                                                          >  1:1225022/1‑143                                                                        TCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGACTTACTCTCACGA                                                                         >  2:204877/1‑143                                                                           TAAACACGACTGCGTCAGCAAGAGACAACGGCCCCGACCCGCTTTTCACCCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAA                                                                      <  2:861460/143‑1                                                                                  tctcGCGCCAGACAGCGGCAACGGCCCCGACCCGCTTTTCCCTCCTGCCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTCGTCA                                                               <  2:513083/139‑1                                                                                     TGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCA                                                            >  1:393913/1‑143                                                                                      GCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGATGTGGTATTACGCCTGATATGATCTCAGGTCAGGAGTAATTACTCTCACGATAGCTGGTCAGCAA                                                           >  2:1319324/1‑143                                                                                         TCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAACTC                                                        >  2:438899/1‑143                                                                                           AGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGCGTTAACGTGCGGATGCGTTACTCTCACGACAACGGGTCAGCACTCCTG                                                      >  2:441701/1‑143                                                                                           AGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGCTGTGGTATTACGCCAGACATGATTTAACGTGCAGATGAATTACACTCACGATAACCGGTCAGCAATTCTG                                                      >  2:1022751/1‑143                                                                                            GAAAGAGACAACGGCCACGCCCCGCTTTTCACTACTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGG                                                     <  2:1046178/143‑1                                                                                             acAGAGCCAACGGCCACCACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGC                                                    <  2:1116733/141‑1                                                                                             AAAGAGACCACGGCCACGACCCGCTTTACACCCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTCATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGC                                                    <  1:1181141/143‑1                                                                                             AAAGAGACAGCGGCCACGGCCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGC                                                    <  2:634093/143‑1                                                                                             AAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGC                                                    <  1:1236793/143‑1                                                                                                GAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCCATTCTGGCCCA                                                 >  1:1310662/1‑143                                                                                                GAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCA                                                 >  1:884603/1‑143                                                                                                   ACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATAT                                              >  1:797824/1‑143                                                                                                    CAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATT                                             >  1:715627/1‑143                                                                                                     AACGGCCACGGCCCGCTTTTCACTCCTACCGGGCAAAATATCCATAGTCGCTAACTTAAGGGTTGTGGGATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTG                                            <  1:250624/143‑1                                                                                                        GGCCACGCCCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTA                                         <  2:683099/143‑1                                                                                                        GGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATGACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGAAATGATGTAACGTGCCGATGAATTACTCACACGATAACCGGTCAACAATTCTGGCCCAGCTTGGTA                                         >  2:669246/1‑143                                                                                                         GCCACGACCCGCTGTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAA                                        <  1:269651/143‑1                                                                                                           CACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGC                                      <  1:170048/143‑1                                                                                                           CACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGC                                      >  1:531971/1‑143                                                                                                           CACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTCAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGC                                      >  1:1259038/1‑143                                                                                                            ACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGACTTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCC                                     >  1:1213594/1‑143                                                                                                             CGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCC                                    <  2:1213594/143‑1                                                                                                                 CCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAG                                >  1:1112459/1‑143                                                                                                                 CCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATATAACGTGCCGATGAATTACTCCCACGATAACTGGTCAGCAATTCTGGCCCCTATTGGTAAGCCCGAAG                                >  1:696372/1‑143                                                                                                                    CTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGATCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAAC                             >  1:981979/1‑143                                                                                                                        TCACTCCTCCCGGGGAGCATTACCATAAGCGCTAACTCAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGA                         <  1:3499/143‑1                                                                                                                         CACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTTGTAAGCCCGAAGAACTGGAT                        >  1:610330/1‑143                                                                                                                         CACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAATCGCCAACAATTCTGGCCCATATTGGTAAGCCCAAAAAACTGGAT                        >  1:608288/1‑143                                                                                                                             CCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTT                    <  1:1122622/143‑1                                                                                                                              CTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGAAACTTg                   >  2:54584/1‑142                                                                                                                               TACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGGCAGCAATTCTGGCCCATATTCGTAAGCCCGAAGGTCTGGgcccagcg                  >  2:110/1‑135                                                                                                                                cCCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGG                 <  1:647421/142‑1                                                                                                                                  CGGTGAGCATTAGCATAAGGGCTAACTTAAGGGTTGTCGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCA               <  2:39674/143‑1                                                                                                                                         CATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGAGAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACCTCGGCACGTAATc        >  2:1102063/1‑142                                                                                                                                             gCCATAAGCGCTAACTCAAGGGTTGTGGTATTACGCCGGATATGATTTAACGTGCCGATGCATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGG    <  2:370873/142‑1                                                                                                                                              CCATCAGCCCTAACTTAAGGGTTGTGGTACTACGCCTGATATGCTTTACCGTGCCGCTGAATTACGCTCACGGTAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCGCGAAGAACTGGATACTTCGGCACGTAATGCCGGG   <  2:24786/143‑1                                                                                                                                              CCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGG   >  1:326336/1‑143                                                                                                                                              CCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGACCGAAGAACGGGAACCTGCGTCACGGCATCCCGGG   >  2:1015646/1‑143                                                                                                                                               CATAAGCGTTAACTTAAGGGGTGGGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGCAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGG  <  1:1131809/143‑1                                                                                                                                               CATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGGCCATATTGGTGAGCCCCAAGAACGGGATACTTCGGCACGTCATGCAGGGG  >  2:961346/1‑143                                                                                                                                               CATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGG  <  1:146215/143‑1                                                                                                                                                                                                                                                                                               ATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2313403‑2313545 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGG  >  NC_000913/2514275‑2514416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.