New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 23135454 (0.050)80 (1.040) 66/280 0.1 95.3% coding (60/2673 nt) rcsD phosphotransfer intermediate protein in two‑component regulatory system with RcsBC
?NC_000913 2514275 = NA (NA)intergenic (+33/‑54) nupC/insL1 nucleoside (except guanosine) transporter/IS186 transposase

ATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2313403‑2313545
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGG  >  NC_000913/2514275‑2514416
                                                                                                                                                                                                                                                                                             
ATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGACGTTTTAACAGGTCATAAACACGAATGCGTGAGAAGATGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACC                                                                                                                                                >  1:370873/1‑143
    ggcAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCAGAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTTCCGGGGAGCATTACCATAA                                                                                                                                            <  2:840073/140‑1
     GTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGACGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGACACGACCCGCTATTCACTCCTACCGGGGAGCATGACCATCAG                                                                                                                                           >  2:1011919/1‑143
     GTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAG                                                                                                                                           >  2:170048/1‑143
        AGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGC                                                                                                                                        >  1:1135648/1‑143
                GAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAA                                                                                                                                <  1:613877/143‑1
                 AATTTCACACTGTACCCTTTATACTGCCCTATCACTCCGCGAAGTGTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAG                                                                                                                               <  1:758035/143‑1
                  ATTTCACACTGTACCCTTTATACGGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGG                                                                                                                              <  1:396475/143‑1
                     TCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTT                                                                                                                           <  1:237727/143‑1
                       ACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGT                                                                                                                         <  1:754505/143‑1
                        CACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTG                                                                                                                        <  1:1058825/143‑1
                        CACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCCAACTTAAGGcccggt                                                                                                                        >  1:418860/1‑137
                         ACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGACAGAGACAACGGCCACGCCCCGCTTTTCACTACTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGG                                                                                                                       >  1:449533/1‑143
                         ACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGG                                                                                                                       <  1:1066516/143‑1
                          CTGCACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGT                                                                                                                      <  1:387434/143‑1
                                   TTATACTGCCCTATCACTTCGCGAAGTTGTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCT                                                                                                             <  1:146732/143‑1
                                     ATACTGCCCTATCGCTTCGCGAAGGTTTAACAGGTCATCAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGA                                                                                                           <  1:410374/143‑1
                                     ATACTGCCCTATCACTGCGCGAAGTTTTACCAGGTCATAAACACGAATGCGTCAGAAAGGGACAACGGCCACGACACGCTACTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGA                                                                                                           <  2:661834/143‑1
                                      TACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGGATTACGCCGGAT                                                                                                          >  2:261707/1‑143
                                         TGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTACTACTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGA                                                                                                      >  1:1363763/1‑143
                                           cgtgATCACCTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAT                                                                                                     <  2:871785/139‑1
                                              TATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTAGTACACCTGATATGATTTc                                                                                                  >  2:882169/1‑142
                                               acCACATCGCGAAGTTTTAACAGTTCACAAACACGAAAGCGTCAGAAAGAGACAACGGCCACTACCCGCCTTTCACACCTAACGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAA                                                                                                 <  1:44123/141‑1
                                               ATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAA                                                                                                 >  1:174272/1‑143
                                                gcgCTTCGCGGAGTTTTAACAGGTCATAAACACGGATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCATTCCTAACGGGGAGCATTACCATAAGCGCTGACTTAAGGGTTGTGTTATTACGCCTGATATGATTTAAC                                                                                                <  2:1190527/140‑1
                                                    TTCGCCAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGC                                                                                            <  1:62198/143‑1
                                                     TCGCGAGGTTTTCACCGGTCATAAACACGATGGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCAGTACCAGAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCC                                                                                           <  2:505993/143‑1
                                                     TCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCC                                                                                           <  1:1306340/143‑1
                                                     TCGCGAAGTTGTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCC                                                                                           <  2:505452/143‑1
                                                      CGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATCCGCGCTAACTTCAGGGTTGTGGTACTCCGCCTGATATGCTTTAAAGTcacg                                                                                          >  2:472320/1‑139
                                                       GCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCAAGACCCGCTTTTCCCTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAGCGATCCGA                                                                                         >  2:460403/1‑143
                                                        CGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTAAGCCTGAAACGTTTTTACGTTCCGAT                                                                                        >  1:843381/1‑143
                                                          AAGTTTTAACTGGCGCTCAACAGGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGA                                                                                      <  2:1139358/143‑1
                                                           AGTTGTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAA                                                                                     <  2:665754/143‑1
                                                               TTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCCAACTTAAGGGCTGTGGTATTACGCCTGATATGCTTTAACATGCCGAcacacacc                                                                                 >  2:1313192/1‑135
                                                                 AACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTC                                                                               <  2:796832/143‑1
                                                                 AACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTC                                                                               <  1:356819/143‑1
                                                                  tcttgttATAATCACGAAGGCGACAGAGAGGGACAGCGGCCACGACCCGCTTTTCACTCCGACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCT                                                                              <  1:177607/136‑1
                                                                  ACAGGGCACAACCGCGATTGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCT                                                                              <  2:579688/143‑1
                                                                    AGGTCATAAACACGACTGCGTCAGAAAGAGACAACGGCCACCGCCCGCTTTTCACTCCTACCGGGGAGCATCACCATAAGCGGTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCA                                                                            <  2:442298/143‑1
                                                                     ggaCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAC                                                                           <  1:117962/140‑1
                                                                     GGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCcc                                                                           >  1:864401/1‑141
                                                                      GTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTCCCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACATGACGATGAATTACTCTCACG                                                                          >  1:1225022/1‑143
                                                                       TCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGACTTACTCTCACGA                                                                         >  2:204877/1‑143
                                                                          TAAACACGACTGCGTCAGCAAGAGACAACGGCCCCGACCCGCTTTTCACCCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAA                                                                      <  2:861460/143‑1
                                                                                 tctcGCGCCAGACAGCGGCAACGGCCCCGACCCGCTTTTCCCTCCTGCCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTCGTCA                                                               <  2:513083/139‑1
                                                                                    TGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCA                                                            >  1:393913/1‑143
                                                                                     GCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGATGTGGTATTACGCCTGATATGATCTCAGGTCAGGAGTAATTACTCTCACGATAGCTGGTCAGCAA                                                           >  2:1319324/1‑143
                                                                                        TCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAACTC                                                        >  2:438899/1‑143
                                                                                          AGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGCGTTAACGTGCGGATGCGTTACTCTCACGACAACGGGTCAGCACTCCTG                                                      >  2:441701/1‑143
                                                                                          AGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGCTGTGGTATTACGCCAGACATGATTTAACGTGCAGATGAATTACACTCACGATAACCGGTCAGCAATTCTG                                                      >  2:1022751/1‑143
                                                                                           GAAAGAGACAACGGCCACGCCCCGCTTTTCACTACTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGG                                                     <  2:1046178/143‑1
                                                                                            acAGAGCCAACGGCCACCACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGC                                                    <  2:1116733/141‑1
                                                                                            AAAGAGACCACGGCCACGACCCGCTTTACACCCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTCATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGC                                                    <  1:1181141/143‑1
                                                                                            AAAGAGACAGCGGCCACGGCCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGC                                                    <  2:634093/143‑1
                                                                                            AAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGC                                                    <  1:1236793/143‑1
                                                                                               GAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCCATTCTGGCCCA                                                 >  1:1310662/1‑143
                                                                                               GAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCA                                                 >  1:884603/1‑143
                                                                                                  ACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATAT                                              >  1:797824/1‑143
                                                                                                   CAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATT                                             >  1:715627/1‑143
                                                                                                    AACGGCCACGGCCCGCTTTTCACTCCTACCGGGCAAAATATCCATAGTCGCTAACTTAAGGGTTGTGGGATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTG                                            <  1:250624/143‑1
                                                                                                       GGCCACGCCCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTA                                         <  2:683099/143‑1
                                                                                                       GGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATGACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGAAATGATGTAACGTGCCGATGAATTACTCACACGATAACCGGTCAACAATTCTGGCCCAGCTTGGTA                                         >  2:669246/1‑143
                                                                                                        GCCACGACCCGCTGTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAA                                        <  1:269651/143‑1
                                                                                                          CACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGC                                      <  1:170048/143‑1
                                                                                                          CACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGC                                      >  1:531971/1‑143
                                                                                                          CACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTCAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGC                                      >  1:1259038/1‑143
                                                                                                           ACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGACTTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCC                                     >  1:1213594/1‑143
                                                                                                            CGACCCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCC                                    <  2:1213594/143‑1
                                                                                                                CCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAG                                >  1:1112459/1‑143
                                                                                                                CCGCTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATATAACGTGCCGATGAATTACTCCCACGATAACTGGTCAGCAATTCTGGCCCCTATTGGTAAGCCCGAAG                                >  1:696372/1‑143
                                                                                                                   CTTTTCACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGATCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAAC                             >  1:981979/1‑143
                                                                                                                       TCACTCCTCCCGGGGAGCATTACCATAAGCGCTAACTCAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGA                         <  1:3499/143‑1
                                                                                                                        CACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTTGTAAGCCCGAAGAACTGGAT                        >  1:610330/1‑143
                                                                                                                        CACTCCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAATCGCCAACAATTCTGGCCCATATTGGTAAGCCCAAAAAACTGGAT                        >  1:608288/1‑143
                                                                                                                            CCTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTT                    <  1:1122622/143‑1
                                                                                                                             CTACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGAAACTTg                   >  2:54584/1‑142
                                                                                                                              TACCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGGCAGCAATTCTGGCCCATATTCGTAAGCCCGAAGGTCTGGgcccagcg                  >  2:110/1‑135
                                                                                                                               cCCGGGGAGCATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGG                 <  1:647421/142‑1
                                                                                                                                 CGGTGAGCATTAGCATAAGGGCTAACTTAAGGGTTGTCGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCA               <  2:39674/143‑1
                                                                                                                                        CATTACCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGAGAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACCTCGGCACGTAATc        >  2:1102063/1‑142
                                                                                                                                            gCCATAAGCGCTAACTCAAGGGTTGTGGTATTACGCCGGATATGATTTAACGTGCCGATGCATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGG    <  2:370873/142‑1
                                                                                                                                             CCATCAGCCCTAACTTAAGGGTTGTGGTACTACGCCTGATATGCTTTACCGTGCCGCTGAATTACGCTCACGGTAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCGCGAAGAACTGGATACTTCGGCACGTAATGCCGGG   <  2:24786/143‑1
                                                                                                                                             CCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGG   >  1:326336/1‑143
                                                                                                                                             CCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGACCGAAGAACGGGAACCTGCGTCACGGCATCCCGGG   >  2:1015646/1‑143
                                                                                                                                              CATAAGCGTTAACTTAAGGGGTGGGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGCAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGG  <  1:1131809/143‑1
                                                                                                                                              CATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGGCCATATTGGTGAGCCCCAAGAACGGGATACTTCGGCACGTCATGCAGGGG  >  2:961346/1‑143
                                                                                                                                              CATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGG  <  1:146215/143‑1
                                                                                                                                                                                                                                                                                             
ATCAGGTAAGAGTCTGGAATTTCACACTGTACCCTTTATACTGCCCTATCACTTCGCGAAGTTTTAACAGGTCATAAACACGAATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2313403‑2313545
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGG  >  NC_000913/2514275‑2514416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.