Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908–258674 258683 10–776 82 [0] [0] 82 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)79 (1.070) 55/268 0.2 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers

GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGG  >  NC_000913/258542‑258825
                                                                                                                                              |                                                                                                                                              
tggtaaaattttgataaatgttgccaatgtggtaaaaccgttgcatcacaacaggagatagcaatgacattaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaa                                                                                                                                                <  2:1258447‑M2/1‑1 (MQ=255)
  ttaaaaatttgctcaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                                                              <  1:464101‑M2/3‑1 (MQ=255)
  ttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtgtattcgtgaaggtaAGt                                                                                                                                              >  1:1301924‑M2/141‑143 (MQ=255)
  ttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtacattcgtgaaggtaAGt                                                                                                                                              >  1:82220‑M2/141‑143 (MQ=255)
  ttaaaaatttgctaaattttgccaatttggcaaaacagttgcatcacaacagaagatagcaatgacgttaccgagcgcacacccgaagagcagattgatcaaaaaatttaccgcactaggcgcgtatattcgtgaaggtaAGt                                                                                                                                              >  1:1216455‑M2/141‑143 (MQ=255)
      aaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactacgcccgcatattcgtgacggtaCGTCCaa                                                                                                                                          >  2:1086457‑M2/137‑143 (MQ=255)
              taaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattggtgaaggtaAGGTCATAgatacac                                                                                                                                  >  2:808089‑M2/129‑140 (MQ=255)
              taaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgacggtaAGTGCGAAGATAATc                                                                                                                                  >  1:226619‑M2/129‑143 (MQ=255)
              taaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATc                                                                                                                                  >  1:1107146‑M2/129‑143 (MQ=255)
                aattttgcgaatttgctaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGa                                                                                                                                <  1:500009‑M2/17‑1 (MQ=255)
                   tttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTc                                                                                                                             >  1:66458‑M2/124‑143 (MQ=255)
                     tgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtggaggtaAGTGCAAAGATAATCGATTCtt                                                                                                                           >  1:307456‑M2/122‑143 (MQ=255)
                        caatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttttt                                                                                                                        <  1:1122262‑M2/25‑1 (MQ=255)
                         aatttggtaaaacagttgcagcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTc                                                                                                                       <  1:792038‑M2/26‑1 (MQ=255)
                              ggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAACGATAATCGATGCTTTCTCGAGTg                                                                                                                  >  2:68194‑M2/113‑143 (MQ=255)
                                taaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAGTCGATTCTTTTTCGAttgca                                                                                                                >  2:234324‑M2/111‑141 (MQ=255)
                                 aaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCt                                                                                                               >  2:1160424‑M2/110‑143 (MQ=255)
                                 aaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCt                                                                                                               <  2:1117715‑M2/34‑1 (MQ=255)
                                 aaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCt                                                                                                               >  1:158042‑M2/110‑143 (MQ=255)
                                  aaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGCTAATCGGCTCTTTTTCGATTGTCTg                                                                                                              >  2:328920‑M2/109‑143 (MQ=255)
                                  aaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAATCTTTTTCGCTTGTCTg                                                                                                              >  2:1145912‑M2/109‑143 (MQ=255)
                                   aacagtggcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTgg                                                                                                             <  1:1175293‑M2/36‑1 (MQ=255)
                                     cagttgcatcacaacaggagatggcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCt                                                                                                           <  2:935196‑M2/38‑1 (MQ=255)
                                        ttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTa                                                                                                        <  1:333288‑M2/41‑1 (MQ=255)
                                        ttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTa                                                                                                        <  1:58818‑M2/41‑1 (MQ=255)
                                          gcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATg                                                                                                      >  1:33759‑M2/101‑143 (MQ=255)
                                           catcacaacagggtatagcaatggctttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGc                                                                                                     <  2:284771‑M2/44‑1 (MQ=255)
                                           cagcgcacgagtagatagtaatgccggtaccgagtggacacgcgaagagcagattgatcaaaaaagtgaccgcactaggtccgtattgtcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGc                                                                                                     <  2:704211‑M2/44‑1 (MQ=255)
                                              caccacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTc                                                                                                  <  1:288495‑M2/47‑1 (MQ=255)
                                              cacaacaggatacagccaggactttaccgagtggacccccgaagagcagattgatcaaaaaatttaccgcactaggcctgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTc                                                                                                  <  1:1224662‑M2/47‑1 (MQ=255)
                                                 aacaggatatatcaatgacgttaccgaatggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc                                                                                              <  1:1030144‑M2/50‑1 (MQ=255)
                                                 aacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCGAc                                                                                              >  1:664698‑M2/94‑143 (MQ=255)
                                                 aacaggagaaagcaatgacgttacggagtggccacccgaagagcagattgagcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc                                                                                              <  1:677318‑M2/50‑1 (MQ=255)
                                                 aaaaataaatattaatgacgttacctagtgaacacccgaagagcagatagaacaaaaaagtaaccgccctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc                                                                                              <  1:1320158‑M2/50‑1 (MQ=255)
                                                   caggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGTAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGCCAACGt                                                                                            <  2:908488‑M2/52‑1 (MQ=255)
                                                      gagatagcaatgacgttaccgagtggacacccgcagagcagattcatcaaaaaatttaccgcactaggcccgtctattcgcgaagggaAGTGCCAAGATAATCGATTCTTTTTCGATTGGCTGGCTGTCTGCGTCACCGTGaa                                                                                         >  2:524577‑M2/89‑143 (MQ=255)
                                                         atagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAAcc                                                                                      <  1:1004273‑M2/58‑1 (MQ=255)
                                                         atagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGCGACAcc                                                                                      >  1:837019‑M2/86‑143 (MQ=255)
                                                           agcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTGCGATTGTCTGGCTGTATGCGTCAACGTGAAACCgg                                                                                    <  2:259409‑M2/60‑1 (MQ=255)
                                                              aatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggccggtgtattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTATGGCTGTATGCGTCAACGTGAAACGGGcag                                                                                 >  1:1283066‑M2/81‑142 (MQ=255)
                                                              aatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCAc                                                                                 >  2:813075‑M2/81‑143 (MQ=255)
                                                              aatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTAAACGTGAAACCGGCAc                                                                                 >  2:122369‑M2/81‑143 (MQ=255)
                                                              aatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggaaAGTGAAAAGATAATCGATTCTTTTTCGATAGTATGGCTGTATGCGTCAACGTGACACCGGCAc                                                                                 >  2:1030370‑M2/81‑143 (MQ=255)
                                                               atgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAACGATAATCGATTCTTTTTCGATTGTCTGGCTGTATCATCTGACGTTAAACCGGCAcc                                                                                >  1:681826‑M2/80‑143 (MQ=255)
                                                                       aaagagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaagggaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCGGGCTGTATACTGCACAGTGACACGGGCCCCGGGAgcgc                                                                        >  2:837643‑M2/72‑143 (MQ=255)
                                                                         cgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGt                                                                      >  2:137244‑M2/70‑143 (MQ=255)
                                                                          gagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGCAACCAGCACCGGAcgtgcgtg                                                                     >  2:940304‑M2/69‑143 (MQ=255)
                                                                                acacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAGGTGCGTGGATTCt                                                               >  1:1204123‑M2/63‑143 (MQ=255)
                                                                                 cacccgcagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTg                                                              <  2:479935‑M2/82‑1 (MQ=255)
                                                                                  acccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTCTGCGTCAACGTGAAACCGGCACCGGAAGCGCGCGGCTTCTgg                                                             >  1:822656‑M2/61‑143 (MQ=255)
                                                                                   ccagcagagcagattgatcaaagagtttaccgcactaggcccgtatatgcgtgaaggtaAGTGCAAAGATAATCGATTCTCTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTctgcg                                                            <  2:985904‑M2/84‑3 (MQ=255)
                                                                                            cagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtgga                                                   >  2:1231245‑M2/51‑143 (MQ=255)
                                                                                            cagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATGCTGGGGCTGGtgga                                                   >  1:1249671‑M2/51‑143 (MQ=255)
                                                                                             agattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGGGAATTCGGGGGCTGGtggat                                                  >  1:148259‑M2/50‑143 (MQ=255)
                                                                                              gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatg                                                 >  1:312136‑M2/49‑143 (MQ=255)
                                                                                              gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatg                                                 <  1:808089‑M2/95‑1 (MQ=255)
                                                                                              gattgatcaaaaaatctaccgcactaggcccgtatatgcgtgaagggaAGTGCAAAGATAAGCGATTCTTTTGCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatg                                                 <  1:188714‑M2/95‑1 (MQ=255)
                                                                                                  gatcaaaaaatttaccgcactaggcccgtatattcgggaaggaaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTAAACGTGAAACCGCCACCGGAAGGGCGTGAATACTGGGGATCATGGGTGGaga                                             >  2:174522‑M2/45‑142 (MQ=255)
                                                                                                   atcaaaaaatttacctcattaggcccgtatattcgtgaaggtaAGTTCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCt                                            <  2:771689‑M2/100‑1 (MQ=255)
                                                                                                    tcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCACAGATAATCGCTTCTTTTTCGATTGTCGGGCGGTATGCGTACACGTGAAACCGGCACCGGAAGTGCGAGGCTTATGCGGCTGGTGTCTGGAGCTg                                           >  1:525271‑M2/43‑143 (MQ=255)
                                                                                                    tcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTg                                           >  2:1177203‑M2/43‑143 (MQ=255)
                                                                                                       aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGCTGGAGCTGGaa                                        >  1:83626‑M2/40‑143 (MQ=255)
                                                                                                       aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGaa                                        >  1:272472‑M2/40‑143 (MQ=255)
                                                                                                       aaaaagttaccgcactaggcccggatatgcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAGTGTCTGGCGGTATGCGTCAACGTGAAACCGGCACCGGCAGGGCGTGAATTCTTGGGCTGGTGGATGGAGCTGgag                                        >  1:581453‑M2/40‑142 (MQ=255)
                                                                                                          aatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAgcg                                     <  2:619804‑M2/107‑1 (MQ=255)
                                                                                                                 cgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGCAt                              >  1:1259148‑M2/30‑143 (MQ=255)
                                                                                                                 cgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAGTCTTTTTCGATTGTATGGCTGTATCCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGCGCCGGTGGATGGAGTTGGATGGGCACgaac                              >  2:876349‑M2/30‑142 (MQ=255)
                                                                                                                  gcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATc                             <  1:813075‑M2/115‑1 (MQ=255)
                                                                                                                   cactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAGTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGCTGGAGCTGGAAGCGCGGGAATcc                            >  2:951207‑M2/28‑143 (MQ=255)
                                                                                                                   cactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATGCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATcc                            <  1:1271047‑M2/116‑1 (MQ=255)
                                                                                                                     ctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCg                          >  1:1175178‑M2/26‑143 (MQ=255)
                                                                                                                       aggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATGCTGGGGCTGGAGGATGGAGCTGGAAGCGCAGGAATCGCgtg                        >  1:154933‑M2/24‑142 (MQ=255)
                                                                                                                        ggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGttt                       <  1:411530‑M2/121‑1 (MQ=255)
                                                                                                                          cccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTa                     <  1:675707‑M2/123‑1 (MQ=255)
                                                                                                                           ccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTAc                    <  1:1335911‑M2/124‑1 (MQ=255)
                                                                                                                              tgtattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTa                 <  2:559813‑M2/127‑1 (MQ=255)
                                                                                                                              tatcttcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGCAACCGGCACCGGAAGTGCGTGAATTGTGGGACTGGTGCATGGGTATGGCAGCGAAGGAATCCCGCTTTACctc                 >  2:1231362‑M2/17‑142 (MQ=255)
                                                                                                                                   tcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGGTGTACGTACGgtg            >  2:352023‑M2/12‑142 (MQ=255)
                                                                                                                                   tcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAAGGACTGGCTGTATGCGTCAACGTGAAACCGTCACCCGAAGTGCGTGAAACCTGGGGCTGGCGGCTGGCACTGCACGCGCAGGAATCCCGTTCTACCTACAGtt            >  2:1035886‑M2/12‑143 (MQ=255)
                                                                                                                                       gaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCa        <  2:272472‑M2/136‑1 (MQ=255)
                                                                                                                                       gaaggaaAGGGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCa        <  1:841182‑M2/136‑1 (MQ=255)
                                                                                                                                             aAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCAGTTTTACCTACAGTTACCAGTTTgg  >  1:945608‑M2/2‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                              
GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGG  >  NC_000913/258542‑258825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.