Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908 258683 776 75 [0] [0] 76 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)73 (1.230) 60/268 0.0 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers

GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGT  >  NC_000913/258542‑258826
                                                                                                                                              |                                                                                                                                              
tgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggccgcaatactcgtgacggtaa                                                                                                                                                >  1:318826‑M2/143‑143 (MQ=255)
  ttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggcgatagcaatgacgttaccgagtggacacccgaagagcagattgatcagacaattcaccgcactaggcccgtgtattcgtgaaggaaAGt                                                                                                                                              >  2:1008648‑M2/141‑143 (MQ=255)
  ttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                                                              >  1:311152‑M2/141‑143 (MQ=255)
  ttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcaaccacattgatatcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                                                              <  2:797123‑M2/3‑1 (MQ=255)
    aaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGc                                                                                                                                            >  2:482210‑M2/139‑143 (MQ=255)
         tatgcgaaattttgccaatgtggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagagtgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGa                                                                                                                                       <  1:596003‑M2/10‑1 (MQ=255)
             ctaaaacttgccaatatggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAAt                                                                                                                                   <  1:813464‑M2/14‑1 (MQ=255)
              taaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATc                                                                                                                                  >  2:1014745‑M2/129‑143 (MQ=255)
               aaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcatgtaggtaCGTGCAAAGATAATCg                                                                                                                                 >  1:240812‑M2/128‑143 (MQ=255)
               aaatgttgccaagttggtaatactggtggatcacgagcgtagacagcaatgacgttaccgagtggacacccggagagcagattaatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCg                                                                                                                                 <  1:376864‑M2/16‑1 (MQ=255)
                  ttttgccaatgtggtaaaacagttgcgtcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAtt                                                                                                                              <  1:458885‑M2/19‑1 (MQ=255)
                   tctgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTc                                                                                                                             <  1:988860‑M2/20‑1 (MQ=255)
                        caatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGCTTCttttt                                                                                                                        >  2:485167‑M2/119‑143 (MQ=255)
                        caatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttttt                                                                                                                        <  1:108747‑M2/25‑1 (MQ=255)
                          atttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagcttgatcaaaaaatttaccgcactaggcccgcatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCg                                                                                                                      >  1:490362‑M2/117‑143 (MQ=255)
                           tttggttaagcagttgcagcaccacatgagatagcaatgacgttaccgggtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGa                                                                                                                     <  1:195544‑M2/28‑1 (MQ=255)
                           tttggtaaaacagttgcatcacaacaggagataccaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGa                                                                                                                     >  2:316794‑M2/116‑143 (MQ=255)
                                  aaacagttgcaccacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaactttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCCTTTTCGCCTGTCTg                                                                                                              >  1:1076008‑M2/109‑143 (MQ=255)
                                    acagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcaccaggcccgtatactcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGc                                                                                                            >  1:125949‑M2/107‑143 (MQ=255)
                                       gttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggcaAGTGCAGAGATAAGCGATTCTTTTTCGATTGTCTGGCTGt                                                                                                         >  2:56324‑M2/104‑143 (MQ=255)
                                        ttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTTGCAGTa                                                                                                        >  1:304635‑M2/103‑143 (MQ=255)
                                         tgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAt                                                                                                       <  2:472411‑M2/42‑1 (MQ=255)
                                         tgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAt                                                                                                       <  2:518489‑M2/42‑1 (MQ=255)
                                          gcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATg                                                                                                      >  2:657060‑M2/101‑143 (MQ=255)
                                           gatcacaacaggagtgagcaatgatgttatcgagtggccatccgaagagcagattgatcaaaaaattttcctcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGc                                                                                                     <  1:1015082‑M2/44‑1 (MQ=255)
                                                 aacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc                                                                                               >  2:865606‑M2/94‑143 (MQ=255)
                                                   cagtatagagcaatgccgttaccgagtggacacccgaagagcagattgatcaaaaaatttacctcaataggcccgtatattcgttaaggtaAGTGTAAAGATAATCGATTCTTTTTCTATTGTCTGGCTGTATGCGTCAACGt                                                                                             <  1:355991‑M2/52‑1 (MQ=255)
                                                   caggaggtagcagttcggttaccgcgtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATGATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGt                                                                                             <  1:676642‑M2/52‑1 (MQ=255)
                                                   caggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTTGCTGTATGCGTCAACGt                                                                                             >  2:551642‑M2/92‑143 (MQ=255)
                                                   caggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGt                                                                                             <  2:132930‑M2/52‑1 (MQ=255)
                                                   caggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggccagtatattcgtgaaggtaAGTGCAAAGATAATCGGTTGTTTTTCGATAGGCTGGCTGTATGCGGCAACGt                                                                                             >  2:370863‑M2/92‑143 (MQ=255)
                                                      gagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttcccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGaa                                                                                          <  2:661552‑M2/55‑1 (MQ=255)
                                                            gcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGc                                                                                    >  2:1098671‑M2/83‑143 (MQ=255)
                                                              aatgacgttaccgagtggacacccgaagagcggattgatcacaaaatttaccgcactaggcccggacattcgtgaaggtaAGTGCAAAGATAATAGATTCTTTTTCGACTGTCTGGCTGTCTGCGTCAACCTGAAACCggcca                                                                                  >  1:598747‑M2/81‑141 (MQ=255)
                                                              aatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactagggccggatatgcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGGGAAAGCGGcag                                                                                  >  1:531463‑M2/81‑142 (MQ=255)
                                                                tgactctcccgagtggacactcgaagagcatattgatcaaaacattcaccgcaccaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTCGCTGTATCCCTCAACGTGAAACCGGCACCg                                                                                <  1:842448‑M2/65‑1 (MQ=255)
                                                                tgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGCCAACGTGAAACCGGCACCg                                                                                >  1:1099087‑M2/79‑143 (MQ=255)
                                                                   cgttaccgagtggatacccgcacagcatattggtcaaaaaatttaccgccctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGaa                                                                             <  1:18908‑M2/68‑1 (MQ=255)
                                                                    gttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAAACGGTTCCGGAAg                                                                            >  2:675883‑M2/75‑143 (MQ=255)
                                                                     ttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatcttcgcgaaggtaAGTGCACAGATAATCGCTTCTTTTTCGATTGTCTGGCTGTACGCGTCACCgtgacaccggcaccgggcgc                                                                           >  1:613837‑M2/74‑139 (MQ=255)
                                                                     ttaccgagtggacacccgaagagcagattgataaaaaaatttaccgcactaggcccgtatattcgtgaaggaaAGTGCAAAGATAATCGATTCTTTTTCGACTGTCTGGCTGTATGCGTCACCGTGAAACCGGCACCGGACGt                                                                           >  1:573762‑M2/74‑143 (MQ=255)
                                                                               gacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCCCCGGAAGTGCGTGCATTc                                                                 >  1:1025240‑M2/64‑143 (MQ=255)
                                                                               gacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTc                                                                 >  2:608372‑M2/64‑143 (MQ=255)
                                                                               gacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAAACGGCACCGCAAGTGCGTGCATTc                                                                 >  1:613109‑M2/64‑143 (MQ=255)
                                                                                acacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAgtgcgtgcaatgt                                                                >  2:735081‑M2/63‑137 (MQ=255)
                                                                                 cactcgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTg                                                               <  2:734548‑M2/82‑1 (MQ=255)
                                                                                   cccgaagagcatcatgagcaaaagtttttcctcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTggg                                                             <  1:221386‑M2/84‑1 (MQ=255)
                                                                                    ccgaagagcagattgatcaaaaaatttaccgctctaggcccgtatattcgtcaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgggg                                                            >  1:571583‑M2/59‑143 (MQ=255)
                                                                                          agcagagtgatcaaaaaagttaccgccccagccccgtatattcatgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGACTGTCTGGCTGTACGCGTCAACGTGAACCCGGCACCGGAAGTGCGTGAATTCTGGGGCtggtg                                                      <  2:240812‑M2/91‑1 (MQ=255)
                                                                                            cagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGACACCGGCACCGGAAGAGCGTTAATTCTGGGGCTGGtgga                                                    >  1:458459‑M2/51‑143 (MQ=255)
                                                                                            cagagtgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtgga                                                    <  2:11904‑M2/93‑1 (MQ=255)
                                                                                             aaattgacccacaaatttgccgcactaggcccgtatatccgtgcaggtaAGCGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCCGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggat                                                   <  2:8649‑M2/94‑1 (MQ=255)
                                                                                              tggtgatcaaaacatttaccgcactaggcccggatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatg                                                  <  2:495164‑M2/95‑1 (MQ=255)
                                                                                              gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatg                                                  >  1:397695‑M2/49‑143 (MQ=255)
                                                                                              gattgatcaaaaaatttaccgcactaggcccgtatattcgtcaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTAGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtcgatg                                                  >  1:70843‑M2/49‑143 (MQ=255)
                                                                                                ttgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatgga                                                <  2:188971‑M2/97‑1 (MQ=255)
                                                                                                ttgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatgga                                                <  2:315757‑M2/97‑1 (MQ=255)
                                                                                                 ttttcaaaaaatttactgcattaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAg                                               <  2:1049555‑M2/98‑1 (MQ=255)
                                                                                                 tgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGAGAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAg                                               <  1:482210‑M2/98‑1 (MQ=255)
                                                                                                  gatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGCAGTGCGTGAATTCTGGGGCTGGTGGAGGGAGc                                              >  1:308650‑M2/45‑143 (MQ=255)
                                                                                                   atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGGGCGTGAAATCTGGGCCGGGTGGATggcgcg                                             >  1:249105‑M2/44‑142 (MQ=255)
                                                                                                    tcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGACTCTTTTTCGCTTGTCTGGCTGAATGCGTCAACGGGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCAGGTGGATGGAGCTg                                            >  2:127953‑M2/43‑143 (MQ=255)
                                                                                                       aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCGCCGGACGTGCGTGAACTAGGGGGCTGGTGGATGGAGCTGGaa                                         >  2:1030049‑M2/40‑143 (MQ=255)
                                                                                                       aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGaa                                         >  2:412495‑M2/40‑143 (MQ=255)
                                                                                                        aaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTAGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAg                                        <  2:626522‑M2/105‑1 (MQ=255)
                                                                                                            gttgccgcactagggccgtagattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa                                    <  1:1069998‑M2/109‑1 (MQ=255)
                                                                                                                  gcactaagcccgtatattcgtgaaggtgAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATc                              <  1:247033‑M2/115‑1 (MQ=255)
                                                                                                                   ctctgtgcccgtatattcgtgaaggtaAGTGGAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATcc                             <  1:743959‑M2/116‑1 (MQ=255)
                                                                                                                   cactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATcc                             >  2:35336‑M2/28‑143 (MQ=255)
                                                                                                                       agggcggtatattcgtgaaggtaAGTGCAAAGATAATCGGTTCTTTTTCGGTGGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGtt                         <  1:12473‑M2/120‑1 (MQ=255)
                                                                                                                         gcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGtttt                       >  2:1068495‑M2/22‑143 (MQ=255)
                                                                                                                           ccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTAc                     <  2:311152‑M2/124‑1 (MQ=255)
                                                                                                                                 attcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGGGGATGGAGCTGGAAGCGCAGGAATGCCGTTTTACGTACAg               >  1:696797‑M2/14‑143 (MQ=255)
                                                                                                                                            taAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTATGCGCGTCAACGTGCCACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg    <  2:683674‑M2/141‑1 (MQ=255)
                                                                                                                                             aAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCATCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATACCGTTTTACCTACAGTTACCAGTTTgg   >  2:105772‑M2/2‑143 (MQ=255)
                                                                                                                                              aGTGCAAGGATAATCGATGCTTTTTCGATTGTGTGGGTGTATGCGGCAACGTGAAAACGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGt  <  1:836984/143‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                              
GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGT  >  NC_000913/258542‑258826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.