Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908 258683 776 75 [0] [0] 76 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)73 (1.230) 60/268 0.0 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers

TGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGC  >  NC_000913/257766‑258049
                                                                                                                                              |                                                                                                                                              
tgtTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCGCAATACTCGTGACGGTAa                                                                                                                                               >  1:318826‑M1/1‑142 (MQ=255)
  ttAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCAACCACATTGATATCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagt                                                                                                                                             <  2:797123‑M1/143‑4 (MQ=255)
  ttAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGCGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAGACAATTCACCGCACTAGGCCCGTGTATTCGTGAAGGAAagt                                                                                                                                             >  2:1008648‑M1/1‑140 (MQ=255)
  ttAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagt                                                                                                                                             >  1:311152‑M1/1‑140 (MQ=255)
    aaaaaTTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgc                                                                                                                                           >  2:482210‑M1/1‑138 (MQ=255)
         tatgcGAAATTTTGCCAATGTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGAGTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaaga                                                                                                                                      <  1:596003‑M1/141‑11 (MQ=255)
             cTAAAACTTGCCAATATGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataat                                                                                                                                  <  1:813464‑M1/143‑15 (MQ=255)
              tAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatc                                                                                                                                 >  2:1014745‑M1/1‑128 (MQ=255)
               aaaTTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCATGTAGGTAcgtgcaaagataatcg                                                                                                                                >  1:240812‑M1/1‑127 (MQ=255)
               aaaTGTTGCCAAGTTGGTAATACTGGTGGATCACGAGCGTAGACAGCAATGACGTTACCGAGTGGACACCCGGAGAGCAGATTAATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcg                                                                                                                                <  1:376864‑M1/143‑17 (MQ=255)
                  ttttGCCAATGTGGTAAAACAGTTGCGTCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgatt                                                                                                                             <  1:458885‑M1/143‑20 (MQ=255)
                   tctgcCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattc                                                                                                                            <  1:988860‑M1/141‑21 (MQ=255)
                        cAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgcttcttttt                                                                                                                       >  2:485167‑M1/1‑118 (MQ=255)
                        cAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattcttttt                                                                                                                       <  1:108747‑M1/143‑26 (MQ=255)
                          aTTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGCTTGATCAAAAAATTTACCGCACTAGGCCCGCATATTCGTGAAGGTAagtgcaaagataatcgattctttttcg                                                                                                                     >  1:490362‑M1/1‑116 (MQ=255)
                           tttGGTTAAGCAGTTGCAGCACCACATGAGATAGCAATGACGTTACCGGGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcga                                                                                                                    <  1:195544‑M1/143‑29 (MQ=255)
                           tttGGTAAAACAGTTGCATCACAACAGGAGATACCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcga                                                                                                                    >  2:316794‑M1/1‑115 (MQ=255)
                                  aaaCAGTTGCACCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAACTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattccttttcgcctgtctg                                                                                                             >  1:1076008‑M1/1‑108 (MQ=255)
                                    aCAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACCAGGCCCGTATACTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggc                                                                                                           >  1:125949‑M1/1‑106 (MQ=255)
                                       gTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGCAagtgcagagataagcgattctttttcgattgtctggctgt                                                                                                        >  2:56324‑M1/1‑103 (MQ=255)
                                        ttGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtcttgcagta                                                                                                       >  1:304635‑M1/1‑102 (MQ=255)
                                         tGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtat                                                                                                      <  2:472411‑M1/143‑43 (MQ=255)
                                         tGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtat                                                                                                      <  2:518489‑M1/143‑43 (MQ=255)
                                          gCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatg                                                                                                     >  2:657060‑M1/1‑100 (MQ=255)
                                           gatCACAACAGGAGTGAGCAATGATGTTATCGAGTGGCCATCCGAAGAGCAGATTGATCAAAAAATTTTCCTCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgc                                                                                                    <  1:1015082‑M1/142‑45 (MQ=255)
                                                  aacaGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaac                                                                                              >  2:865606‑M1/1‑93 (MQ=255)
                                                    cagtatagagcaatgccGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCTCAATAGGCCCGTATATTCGTTAAGGTAagtgtaaagataatcgattctttttctattgtctggctgtatgcgtcaacgt                                                                                            <  1:355991‑M1/135‑53 (MQ=255)
                                                    caGGAGGTAGCAGTTCGGTTACCGCGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagatgatcgattctttttcgattgtctggctgtatgcgtcaacgt                                                                                            <  1:676642‑M1/143‑53 (MQ=255)
                                                    caGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtcttgctgtatgcgtcaacgt                                                                                            >  2:551642‑M1/1‑91 (MQ=255)
                                                    caGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgt                                                                                            <  2:132930‑M1/143‑53 (MQ=255)
                                                    caGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCAGTATATTCGTGAAGGTAagtgcaaagataatcggttgtttttcgataggctggctgtatgcggcaacgt                                                                                            >  2:370863‑M1/1‑91 (MQ=255)
                                                       gagaTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTCCCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaa                                                                                         <  2:661552‑M1/143‑56 (MQ=255)
                                                             gCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggc                                                                                   >  2:1098671‑M1/1‑82 (MQ=255)
                                                               aaTGACGTTACCGAGTGGACACCCGAAGAGCGGATTGATCACAAAATTTACCGCACTAGGCCCGGACATTCGTGAAGGTAagtgcaaagataatagattctttttcgactgtctggctgtctgcgtcaacctgaaaccggcca                                                                                 >  1:598747‑M1/1‑80 (MQ=255)
                                                               aaTGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGGCCGGATATGCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgggaaagcggcag                                                                                 >  1:531463‑M1/1‑80 (MQ=255)
                                                                 tgactctcccgagtggacACTCGAAGAGCATATTGATCAAAACATTCACCGCACCAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctcgctgtatccctcaacgtgaaaccggcaccg                                                                               <  1:842448‑M1/135‑66 (MQ=255)
                                                                 tGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgccaacgtgaaaccggcaccg                                                                               >  1:1099087‑M1/1‑78 (MQ=255)
                                                                    cGTTACCGAGTGGATACCCGCACAGCATATTGGTCAAAAAATTTACCGCCCTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaa                                                                            <  1:18908‑M1/143‑69 (MQ=255)
                                                                     gTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaacggttccggaag                                                                           >  2:675883‑M1/1‑74 (MQ=255)
                                                                      ttACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATCTTCGCGAAGGTAagtgcacagataatcgcttctttttcgattgtctggctgtacgcgtcaccgtgacaccggcaccgggcgc                                                                          >  1:613837‑M1/1‑73 (MQ=255)
                                                                      ttACCGAGTGGACACCCGAAGAGCAGATTGATAAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGAAagtgcaaagataatcgattctttttcgactgtctggctgtatgcgtcaccgtgaaaccggcaccggacgt                                                                          >  1:573762‑M1/1‑73 (MQ=255)
                                                                                gACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggccccggaagtgcgtgcattc                                                                >  1:1025240‑M1/1‑63 (MQ=255)
                                                                                gACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattc                                                                >  2:608372‑M1/1‑63 (MQ=255)
                                                                                gACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaacggcaccgcaagtgcgtgcattc                                                                >  1:613109‑M1/1‑63 (MQ=255)
                                                                                 acacCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgcaatgt                                                               >  2:735081‑M1/1‑62 (MQ=255)
                                                                                  cacTCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctg                                                              <  2:734548‑M1/143‑83 (MQ=255)
                                                                                    cccGAAGAGCATCATGAGCAAAAGTTTTTCCTCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggg                                                            <  1:221386‑M1/143‑85 (MQ=255)
                                                                                     ccGAAGAGCAGATTGATCAAAAAATTTACCGCTCTAGGCCCGTATATTCGTCAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgggg                                                           >  1:571583‑M1/1‑58 (MQ=255)
                                                                                           agCAGAGTGATCAAAAAAGTTACCGCCCCAGCCCCGTATATTCATGAAGGTAagtgcaaagataatcgattctttttcgactgtctggctgtacgcgtcaacgtgaacccggcaccggaagtgcgtgaattctggggctggtg                                                     <  2:240812‑M1/143‑92 (MQ=255)
                                                                                             cAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgacaccggcaccggaagagcgttaattctggggctggtgga                                                   >  1:458459‑M1/1‑50 (MQ=255)
                                                                                             cAGAGTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtgga                                                   <  2:11904‑M1/143‑94 (MQ=255)
                                                                                              aaattGACCCACAAATTTGCCGCACTAGGCCCGTATATCCGTGCAGGTAagcgcaaagataatcgattctttttcgattgtctggccgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggat                                                  <  2:8649‑M1/141‑95 (MQ=255)
                                                                                               tggtgatCAAAACATTTACCGCACTAGGCCCGGATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatg                                                 <  2:495164‑M1/140‑96 (MQ=255)
                                                                                               gATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatg                                                 >  1:397695‑M1/1‑48 (MQ=255)
                                                                                               gATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTCAAGGTAagtgcaaagataatcgattctttttcgattgtctagctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtcgatg                                                 >  1:70843‑M1/1‑48 (MQ=255)
                                                                                                 ttGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatgga                                               <  2:315757‑M1/143‑98 (MQ=255)
                                                                                                 ttGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatgga                                               <  2:188971‑M1/143‑98 (MQ=255)
                                                                                                  ttttcaaAAAATTTACTGCATTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggag                                              <  2:1049555‑M1/140‑99 (MQ=255)
                                                                                                  tGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagagaatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggag                                              <  1:482210‑M1/143‑99 (MQ=255)
                                                                                                   gATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggcagtgcgtgaattctggggctggtggagggagc                                             >  1:308650‑M1/1‑44 (MQ=255)
                                                                                                    aTCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagggcgtgaaatctgggccgggtggatggcgcg                                            >  1:249105‑M1/1‑43 (MQ=255)
                                                                                                     tCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgactctttttcgcttgtctggctgaatgcgtcaacgggaaaccggcaccggaagtgcgtgaattctggggcaggtggatggagctg                                           >  2:127953‑M1/1‑42 (MQ=255)
                                                                                                        aaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcgccggacgtgcgtgaactagggggctggtggatggagctggaa                                        >  2:1030049‑M1/1‑39 (MQ=255)
                                                                                                        aaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaa                                        >  2:412495‑M1/1‑39 (MQ=255)
                                                                                                         aaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctagctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaag                                       <  2:626522‑M1/143‑106 (MQ=255)
                                                                                                             gttgccgcacTAGGGCCGTAGATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgca                                   <  1:1069998‑M1/139‑110 (MQ=255)
                                                                                                                   gCACTAAGCCCGTATATTCGTGAAGGTGagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatc                             <  1:247033‑M1/143‑116 (MQ=255)
                                                                                                                    ctctgtgcccgtaTATTCGTGAAGGTAagtggaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcc                            <  1:743959‑M1/137‑117 (MQ=255)
                                                                                                                    cACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcc                            >  2:35336‑M1/1‑27 (MQ=255)
                                                                                                                        agggcggtatattCGTGAAGGTAagtgcaaagataatcggttctttttcggtggtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgtt                        <  1:12473‑M1/137‑121 (MQ=255)
                                                                                                                          gCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgtttt                      >  2:1068495‑M1/1‑21 (MQ=255)
                                                                                                                            ccGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttac                    <  2:311152‑M1/143‑125 (MQ=255)
                                                                                                                                  atTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctgggggatggagctggaagcgcaggaatgccgttttacgtacag              >  1:696797‑M1/1‑13 (MQ=255)
                                                                                                                                             tAagtgcaaagataatcgattctttttcgattgtctggctatgcgcgtcaacgtgccaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttg   <  2:683674‑M1/143‑142 (MQ=255)
                                                                                                                                              aagtgcaaagataatcgattctttttcgattgtctggctgtatgcatcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaataccgttttacctacagttaccagtttgg  >  2:105772‑M1/1‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                              
TGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGC  >  NC_000913/257766‑258049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: