New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4168397 =	32 (0.560)	8 (0.150)	7/272	5.4	20.7%	noncoding (27/76 nt)	gltT	tRNA‑Glu
	?	NC_000913	4209818 =	NA (NA)					noncoding (46/76 nt)	gltV	tRNA‑Glu
Rejected: Coverage evenness skew score above cutoff.

GCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTG  >  NC_000913/4168261‑4168536                                                                                                                                         |                                                                                                                                            gcggtgacgggctGGGAGTGAGTCTGACGAGAACAAGGCCGCTCGCTTTCTATTAATGAAAGCTCACCCTACACGAACATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGccc                                                                                                                                       <  1:557485/131‑1 (MQ=1)                               taagaatgCCGTTCGCTTTCTATGAAGCACAGCGTCCCCTACACGAAAATATCACGCAACGCGTGATAAGCGATTTTCGTGTCCCCCTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATccc                                                                                                         <  1:586889/136‑1 (MQ=1)                                                    aTTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGACCAGGAGACCGCCCTTTAACGGCGGTAACAGGGGTTCGAATCCCCTACGGCGCGGCACtagtcgg                                                                                    >  1:989704/1‑137 (MQ=1)                                                         tgcaaGCTCCCCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTtgt                                                                               <  2:507628/140‑1 (MQ=1)                                                             agatCACACTACACTATAATATCACGTAACGTGTGATAAGTACTTTGTGTATCCCCTGCGTCTAGAGGGCCAGGACACCGGCCGTGCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtgagt                                                                           <  2:663543/140‑1 (MQ=1)                                                                tCACCCTACACGAAAATATCACGCCACGCGTGCTAAGCAATTTTCGTGTCCCCTTCGTCTAGAGCCACAGACCACCGCCCTTTCACGCCGGTCCCAGGGGTCCGAATCCCCTCCGGGACACAGCTTGCCgggcagtgacgaaa                                                                        >  1:380305/1‑131 (MQ=0)                                                                              aaTAGCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTa                                                          <  2:99613/143‑1 (MQ=14)                                                                                   cACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACTGGGGTTCCAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATAtc                                                     <  2:940468/143‑1 (MQ=17)                                                                                    aCGCAACGCGTGACAAGCCATTTTCGTGTCCCCTTCGCCCAGCGGCCCAGGACACCGCCCTTTCACGGCGGTACCAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAATTCGCCGACCTTAATAtct                                                    <  2:192264/143‑1 (MQ=11)                                                                                     cGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATAtctc                                                   <  2:430644/143‑1 (MQ=32)                                                                                      gCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCAACCTTAATATCTCa                                                  >  1:624299/1‑143 (MQ=17)                                                                                            cctaagaagatgttttCGTGTCCCCGTCGTCTAGAGGCCCAGGACACCGACCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTTGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTc                                            <  1:34488/131‑1 (MQ=11)                                                                                               gATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATACCACATAGCTCATc                                         >  1:152083/1‑143 (MQ=255)                                                                                                  aaGCAATTCTCGTGTCCCCGGCGTCTAGAGGCCCATGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGTGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTc                                      <  1:414049/143‑1 (MQ=14)                                                                                                   aGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCg                                     <  1:178015/143‑1 (MQ=39)                                                                                                      aaTTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGt                                  <  2:435183/143‑1 (MQ=255)                                                                                                       aTTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTg                                 >  1:363187/1‑143 (MQ=255)                                                                                                             gtgtCCCCTGCGTCTAGGGGCCCAGGGCACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGttt                           <  1:327684/143‑1 (MQ=255)                                                                                                             gtggCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGCAAGTCGCCAACCTTAATATCTCAAAACGCATCTTCGGGTGATGttt                           <  2:188476/143‑1 (MQ=255)                                                                                                             gtctCCCCTTCGTCCAGAGGCCCAGGCCACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGCCGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGttt                           <  1:3404/140‑1 (MQ=255)                                                                                                                  cccTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGat                      >  2:991476/1‑143 (MQ=37)                                                                                                                  cccTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGAGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAACACTCATCTTCGGGTGCTGTTTGCGat                      >  2:947315/1‑143 (MQ=255)                                                                                                                    cTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGatat                    >  2:872085/1‑143 (MQ=38)                                                                                                                     ttCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATAtt                   >  2:937372/1‑143 (MQ=39)                                                                                                                     tccGTCTGGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTTAAAACTCATCTTCGGGTGATGTTTGAGATAtt                   <  1:515003/141‑1 (MQ=255)                                                                                                                         tCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGct               >  2:41965/1‑143 (MQ=38)                                                                                                                         tCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGAGGACGCCACGTGCTCGTTTGTGAGTGAAAGTCGCAGACCTTAATATCTCAAAACTCATCGTGGTGTGATGTTTAACATATTTGct               >  1:309789/1‑143 (MQ=11)                                                                                                                           tAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCGCTTGCTGGTTTGTGAGTGAAAGTCGCCGGGGTTAATAGGTGAAAGCTGGTGGTCGGGGGATGGTTGAGTGATTTgatgt             >  2:70295/1‑139 (MQ=11)                                                                                                                             gagGCCCAGGACACCGCCCTTTAACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGGTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGGGATATTTGCTCttt           >  2:913350/1‑143 (MQ=255)                                                                                                                              agGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTa          <  1:210480/143‑1 (MQ=38)                                                                                                                                   cAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAAt     >  2:710706/1‑143 (MQ=39)                                                                                                                                      gACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTg  <  2:862826/143‑1 (MQ=38)                                                                                                                                         |                                                                                                                                            GCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTG  >  NC_000913/4168261‑4168536

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.