New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4168397 =	32 (0.560)	8 (0.150)	7/272	5.4	20.7%	noncoding (27/76 nt)	gltT	tRNA‑Glu
	?	NC_000913	4209818 =	NA (NA)					noncoding (46/76 nt)	gltV	tRNA‑Glu
Rejected: Coverage evenness skew score above cutoff.

TCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCT  >  NC_000913/4209677‑4209876                                                                                                                                              |                                                           tCACCTCCTTACCGTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGAAAGGAGACTTGCGAAGCAGACTGATACGTACCCTTAGTAGAGAGGCCCAGCAAAGAAACCATTCACGGCAGTaa                                                           >  1:385838/1‑143 (MQ=11)     ctcctTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGCAACAgg                                                       >  1:424519/1‑143 (MQ=17)      tcctTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTATAGAGGCCCACGACACCGCCCTTTCACGGCGGTAACAggg                                                      >  2:673290/1‑143 (MQ=17)        cttaccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGt                                                    >  1:154444/1‑143 (MQ=32)        ctgaccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGGTTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGt                                                    <  1:180327/140‑1 (MQ=17)          ttccttaAAGAAGCGTGCTTTGCCGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTc                                                  <  1:827236/141‑1 (MQ=12)          gagctgaaaGGAGCGTTGGGTGCAGTGCGCACACGGAGTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCTCTTCGTCTGGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTc                                                  <  2:437444/137‑1 (MQ=11)             cgtaAAGAAGCGTTCTTTGCTGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAATGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGaa                                               <  1:900232/141‑1 (MQ=12)              ttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCATTCACGGCGGTAACAGGAGCTCGAAt                                              >  1:774040/1‑143 (MQ=12)              ttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCATTTCACGGCGGTAACAGGGGTCCGAAt                                              >  1:191375/1‑143 (MQ=17)               taAAGAAGCGTTCTGTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc                                             <  2:52770/143‑1 (MQ=17)                  agaagCGTTCCTTACAGGGCTCACACAGATTGTCTGATAGAAAGTGAAACGCAAGGCGTCTTGCGAAGCAGACTGCTACGTCCCCTTCGTCTAGAGGCCTAGGATACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATcccc                                          <  1:402014/143‑1 (MQ=11)                    aagCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGGATCCCCTa                                        >  2:162703/1‑143 (MQ=17)                    aagCGTTCTTTGCAGTGCGCCCACAGATTGTGTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTa                                        <  1:237860/143‑1 (MQ=12)                     cgCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTTAAATGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAg                                       <  2:736422/142‑1 (MQ=17)                     agCGTTCTTGGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAAATCACTTTCCTTGCACGGCGGTAACAGGGGTTCGAATCCCCTAg                                       <  2:944543/143‑1 (MQ=11)                      gCGTTCTTTGCAGTGCTCACACAGATTGTCTGCTAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTACCGGCGGTAACACGGGTTCGAATCCCCCAgg                                      >  1:517425/1‑143 (MQ=11)                          tCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGAc                                  >  1:963473/1‑143 (MQ=32)                           cTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCCAGAGGCCCAGGACACCGCCCTTTCCCGCCGGTACCCGGGGTTCCAATCCCCtccgggccg                                 >  1:102045/1‑135 (MQ=11)                            tttGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAATCCCCTAGGGGACGc                                >  2:833129/1‑143 (MQ=17)                               gCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGAGACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCAc                             <  2:35835/143‑1 (MQ=17)                               gCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCAc                             >  2:757962/1‑143 (MQ=32)                                 aGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACtt                           >  2:848422/1‑143 (MQ=32)                                      tCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGATCGAATCCCCTAGGGGACGCCACGTGCCgg                      >  1:586908/1‑143 (MQ=12)                                        acacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGTGACGCCACTTGCTGGtt                    >  2:389951/1‑143 (MQ=17)                                         cacaGGTTGTCTGACAGACAGTGAAAGGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGttt                   <  1:561568/143‑1 (MQ=255)                                         cacaGATTGTCTGATAGAAAGTGAAAAGCGAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTATAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGttt                   <  2:297692/143‑1 (MQ=17)                                         cacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGttt                   >  1:863653/1‑143 (MQ=32)                                          acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTtg                  >  1:364757/1‑143 (MQ=32)                                             gcttcgcTGATAGAAAGTGAAAATCAAGGCGGCTTGCGCCGCCGACTTACACGTCCCCTTCGTCTAGAGGCCCACGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtga               <  2:981459/137‑1 (MQ=11)                                             gactgcccgcgaaaaaGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtga               <  2:612056/130‑1 (MQ=2)                                             gATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtga               >  2:487377/1‑143 (MQ=32)                                             gATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtga               >  2:867409/1‑143 (MQ=32)                                               ttGTCTGATTGAGAGTCAAAAGCAAGGCGTCTTGCGCAGCAGACTGATCCGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtgagt             <  1:606503/143‑1 (MQ=11)                                                  tCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGaa          <  2:938638/143‑1 (MQ=32)                                                    tGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAg        >  1:654818/1‑143 (MQ=32)                                                     gATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAACCCCCTAGGGGACGCCACTTGCTGGTTCGCGAGGGAAAGt       >  1:664158/1‑143 (MQ=255)                                                      gtAGAAAGTGAAAAGCCAGGCGTCTTGCGAAGCAGACTGATACGTCCCATTAGTCTAGAGTCTCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTc      <  1:592951/142‑1 (MQ=11)                                                       tAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCa     <  2:918157/143‑1 (MQ=32)                                                        aGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCAGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGGTTGTGAGTGAAAGCCAc    >  1:484864/1‑143 (MQ=12)                                                         gAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCAcc   >  2:67870/1‑143 (MQ=31)                                                          aaaGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCt  >  1:815516/1‑143 (MQ=11)                                                                                                                                              |                                                           TCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCT  >  NC_000913/4209677‑4209876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.