New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4168410 =	40 (0.700)	8 (0.150)	4/272	6.9	17.3%	noncoding (40/76 nt)	gltT	tRNA‑Glu
	?	NC_000913	4209805 =	NA (NA)					noncoding (33/76 nt)	gltV	tRNA‑Glu
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT  >  NC_000913/4168291‑4168552                                                                                                                        |                                                                                                                                               taagaatgCCGTTCGCTTTCTATGAAGCACAGCGTCCCCTACACGAAAATATCACGCAACGCGTGATAAGCGATTTTCGTGTCCCCCTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATccc                                                                                                                         <  1:586889/136‑1 (MQ=1)                      aTTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGACCAGGAGACCGCCCTTTAACGGCGGTAACAGGGGTTCGAATCCCCTACGGCGCGGCACtagtcgg                                                                                                    >  1:989704/1‑137 (MQ=1)                           tgcaaGCTCCCCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTtgt                                                                                               <  2:507628/140‑1 (MQ=1)                               agatCACACTACACTATAATATCACGTAACGTGTGATAAGTACTTTGTGTATCCCCTGCGTCTAGAGGGCCAGGACACCGGCCGTGCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtgagt                                                                                           <  2:663543/140‑1 (MQ=1)                                  tCACCCTACACGAAAATATCACGCCACGCGTGCTAAGCAATTTTCGTGTCCCCTTCGTCTAGAGCCACAGACCACCGCCCTTTCACGCCGGTCCCAGGGGTCCGAATCCCCTCCGGGACACAGCTTGCCgggcagtgacgaaa                                                                                        >  1:380305/1‑131 (MQ=0)                                                aaTAGCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTa                                                                          <  2:99613/143‑1 (MQ=14)                                                     cACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACTGGGGTTCCAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATAtc                                                                     <  2:940468/143‑1 (MQ=17)                                                      aCGCAACGCGTGACAAGCCATTTTCGTGTCCCCTTCGCCCAGCGGCCCAGGACACCGCCCTTTCACGGCGGTACCAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAATTCGCCGACCTTAATAtct                                                                    <  2:192264/143‑1 (MQ=11)                                                       cGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATAtctc                                                                   <  2:430644/143‑1 (MQ=32)                                                        gCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCAACCTTAATATCTCa                                                                  >  1:624299/1‑143 (MQ=17)                                                              cctaagaagatgttttCGTGTCCCCGTCGTCTAGAGGCCCAGGACACCGACCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTTGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTc                                                            <  1:34488/131‑1 (MQ=11)                                                                 gATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATACCACATAGCTCATc                                                         >  1:152083/1‑143 (MQ=255)                                                                    aaGCAATTCTCGTGTCCCCGGCGTCTAGAGGCCCATGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGTGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTc                                                      <  1:414049/143‑1 (MQ=14)                                                                     aGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCg                                                     <  1:178015/143‑1 (MQ=39)                                                                        aaTTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGt                                                  <  2:435183/143‑1 (MQ=255)                                                                         aTTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTg                                                 >  1:363187/1‑143 (MQ=255)                                                                               gtgtCCCCTGCGTCTAGGGGCCCAGGGCACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGttt                                           <  1:327684/143‑1 (MQ=255)                                                                               gtggCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGCAAGTCGCCAACCTTAATATCTCAAAACGCATCTTCGGGTGATGttt                                           <  2:188476/143‑1 (MQ=255)                                                                               gtctCCCCTTCGTCCAGAGGCCCAGGCCACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGCCGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGttt                                           <  1:3404/140‑1 (MQ=255)                                                                                    cccTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGat                                      >  2:991476/1‑143 (MQ=37)                                                                                    cccTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGAGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAACACTCATCTTCGGGTGCTGTTTGCGat                                      >  2:947315/1‑143 (MQ=255)                                                                                      cTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGatat                                    >  2:872085/1‑143 (MQ=38)                                                                                       ttCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATAtt                                   >  2:937372/1‑143 (MQ=39)                                                                                       tccGTCTGGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTTAAAACTCATCTTCGGGTGATGTTTGAGATAtt                                   <  1:515003/141‑1 (MQ=255)                                                                                           tCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGct                               >  2:41965/1‑143 (MQ=38)                                                                                           tCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGAGGACGCCACGTGCTCGTTTGTGAGTGAAAGTCGCAGACCTTAATATCTCAAAACTCATCGTGGTGTGATGTTTAACATATTTGct                               >  1:309789/1‑143 (MQ=11)                                                                                             tAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCGCTTGCTGGTTTGTGAGTGAAAGTCGCCGGGGTTAATAGGTGAAAGCTGGTGGTCGGGGGATGGTTGAGTGATTTgatgt                             >  2:70295/1‑139 (MQ=11)                                                                                               gagggccaggctcgcGCTCTTTGACGGCGGTAACAGGGGTTGGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCttt                           <  1:338999/129‑1 (MQ=11)                                                                                               gagGCCCAGGACACCGCCCTTTAACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGGTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGGGATATTTGCTCttt                           >  2:913350/1‑143 (MQ=255)                                                                                                agGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTa                          <  1:210480/143‑1 (MQ=38)                                                                                                     cAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAAt                     >  2:710706/1‑143 (MQ=39)                                                                                                        gACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTg                  <  2:862826/143‑1 (MQ=38)                                                                                                            cctcccTTTCACGGCGGTAACAGTGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATc              <  2:711729/140‑1 (MQ=255)                                                                                                               cccTTTCGCGGCGGTACCAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGTGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAg           <  1:868174/143‑1 (MQ=255)                                                                                                               cccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGAGAGTGAAACTCGCCGACCTTAATATCTCAACACTCATCTTCGGGTGATGTTTGAGACATTTGCTCTTTAAAAATATGAATCAAg           >  2:386459/1‑143 (MQ=11)                                                                                                                ccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGc          >  2:972283/1‑143 (MQ=38)                                                                                                                 ctgtCACCGCGGTAACCGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGTCCTTAATATCTCAAATCTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCt         <  1:923394/140‑1 (MQ=11)                                                                                                                 cgttCACGGCGGTAACAGGGGTTCGAATCGCCTGGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGTGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCt         <  2:451419/141‑1 (MQ=255)                                                                                                                      aCGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGaaaa    >  2:737171/1‑143 (MQ=38)                                                                                                                       cggcggTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAAt   <  2:626898/143‑1 (MQ=39)                                                                                                                        ggcggTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAAtt  <  2:363187/143‑1 (MQ=38)                                                                                                                        ggcggTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAAtt  <  1:943836/143‑1 (MQ=37)                                                                                                                        |                                                                                                                                               GAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATT  >  NC_000913/4168291‑4168552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.