Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,815,858 Δ82 bp [rph][rph] [rph], [rph]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3815858 3815939 82 68 [0] [0] 68 [rph]–[rph] [rph], [rph]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 38158570 (0.000)63 (1.190) 48/264 0.1 100% pseudogene (24/48 nt) rph ribonuclease PH (defective),enzyme, Degradation of RNA, RNase PH
?NC_000913 3815940 = 0 (0.000)pseudogene (609/669 nt) rph ribonuclease PH (defective),enzyme, Degradation of RNA, RNase PH

AAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT  >  NC_000913/3815804‑3816081
                                                                                                                                        |                                                                                                                                             
gcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTcccc                                                                                                                                         <  2:23949‑M2/7‑1 (MQ=255)
 attgctaagcgaaaagtcaataaacgggcgctgatatggtgtcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCt                                                                                                                                        <  2:369022‑M2/8‑1 (MQ=255)
     ctaagcgcaaattcaagaaactggcgctgatatggtttcatgccttcgctcctcagcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCAc                                                                                                                                    <  1:343143‑M2/12‑1 (MQ=255)
      taagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagccaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACt                                                                                                                                   >  1:355535‑M2/131‑143 (MQ=255)
      taagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgcctcctgcCGCCCCCTGCACt                                                                                                                                   >  1:264610‑M2/131‑143 (MQ=255)
           gcaagttcaataaactggcgctgatatggttgcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAat                                                                                                                              <  2:528640‑M2/18‑1 (MQ=255)
           gcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAat                                                                                                                              >  1:530071‑M2/126‑143 (MQ=255)
             caattcaataaactgccgctgatagggtttcatgccatcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatga                                                                                                                            <  1:82866‑M2/20‑1 (MQ=255)
                ttcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgcctcatccgtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCCATGATgc                                                                                                                         >  1:891028‑M2/121‑143 (MQ=255)
                  caatcaacaggcactgacattgtttcatgccttcgctcctcacctgactgccctccagaccaaaaaaaggcgactcatcagtcgccttaaacatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc                                                                                                                       <  2:327962‑M2/25‑1 (MQ=255)
                  caataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaatgcgattcattagtcgcattaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc                                                                                                                       <  2:803225‑M2/25‑1 (MQ=255)
                    ataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGccc                                                                                                                     >  1:424431‑M2/117‑143 (MQ=255)
                      aaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgacccatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCcgc                                                                                                                   >  1:609076‑M2/115‑142 (MQ=255)
                         ctggtgctgttatggtttcatgccttcgcgcctcatcttactgttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCtt                                                                                                                <  1:823768‑M2/32‑1 (MQ=255)
                          tgtagctgagatggtttcaggccttcgcgcctcattttacttttctacttaccaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTc                                                                                                               <  1:881259‑M2/33‑1 (MQ=255)
                            gcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCgg                                                                                                             <  2:407129‑M2/35‑1 (MQ=255)
                             cgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggtgactcatcggtcgccttaaaactcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGt                                                                                                            <  2:518292‑M2/36‑1 (MQ=255)
                                tgatatggcttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcat                                                                                                         <  2:527902‑M2/39‑1 (MQ=255)
                                  atatggttgcacgccttcgctccccatcttacttttcgacagacaaaaaaaaggcgacgcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcatca                                                                                                       <  2:852757‑M2/41‑1 (MQ=255)
                                    atggtttcatgccgtcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACt                                                                                                     <  1:448399‑M2/43‑1 (MQ=255)
                                       gtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAGTGATGCCCCCGTCTCCGGTCATcactgag                                                                                                  >  1:342352‑M2/98‑140 (MQ=255)
                                       gttccatgcctgcgcccctcgtcgtacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACg                                                                                                  <  1:728932‑M2/46‑1 (MQ=255)
                                        tttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGGCACCACtacct                                                                                                 >  1:891524‑M2/97‑141 (MQ=255)
                                          tcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCCTCGCTCATCACTAcgtcc                                                                                               >  1:718317‑M2/95‑141 (MQ=255)
                                                cttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCCCCCGTCTTCGGTCATCCCCCCGTTCCtgtag                                                                                         >  1:444714‑M2/89‑141 (MQ=255)
                                                  tctctcctcaacttacctttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGt                                                                                       <  1:139231‑M2/57‑1 (MQ=255)
                                                      tcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagccccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCCTCCCTACGCTCATGGCGGTctct                                                                                   >  1:131880‑M2/83‑143 (MQ=255)
                                                        ctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgcattctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGc                                                                                 >  2:986457‑M2/81‑143 (MQ=255)
                                                             cttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTAcagcag                                                                            >  2:605448‑M2/76‑143 (MQ=255)
                                                              ttcctttcctaccgacaaaaagaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCaga                                                                           <  1:615811‑M2/69‑1 (MQ=255)
                                                              ttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatccgtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCaga                                                                           <  2:901713‑M2/69‑1 (MQ=255)
                                                                  ttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTacgttcatgtcggtctccgagaccgagcca                                                                       >  2:929844‑M2/71‑130 (MQ=255)
                                                                    tgctacagacaaaaaaaaggcgactcctcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTc                                                                     <  1:562892‑M2/75‑1 (MQ=255)
                                                                       tacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGCTCATCACTACGTTCATATCCGCCTCTGCCGCAGAGTCTCCAAc                                                                  >  2:125761‑M2/66‑143 (MQ=255)
                                                                       tacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCGTCGGTCCTCACTACGTTCATGCCGGTCTCTGCGGCCGAGTCTtcacc                                                                  >  1:811108‑M2/66‑141 (MQ=255)
                                                                           gacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCTGCAGAGTATTCAACGTAt                                                              >  2:607562‑M2/62‑143 (MQ=255)
                                                                              aaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGAGCATCACTACGTTCATCTCGGTCTCTGCGGCCAGGTATTCAACGTATTcc                                                           >  1:957947‑M2/59‑143 (MQ=255)
                                                                              aaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCCCGCGTTTTGGGGCACCCCCACGTTCATGTCGGTCGCTGCGGCAGAGTCTTCAACGTATTcc                                                           >  1:208379‑M2/59‑143 (MQ=255)
                                                                               aaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCa                                                          <  2:530071‑M2/86‑1 (MQ=255)
                                                                               aaaaaaagccgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGAGGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCa                                                          <  1:610894‑M2/86‑1 (MQ=255)
                                                                                  agaaggcaactcatcggtcgccttacaagtcagtttgcatgcgccgccttctgtCCTCCCCTTCACTTCACTGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCGCTGCGGCAGAGTCTTCAACGTATTCCAGAt                                                       <  1:650875‑M2/89‑1 (MQ=255)
                                                                                  aaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATACAGCGCCTCAATGCCTTTATCATTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAt                                                       <  2:37855‑M2/89‑1 (MQ=255)
                                                                                  aaaaggcgactcatcagtcgccttaaaaaccagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAt                                                       <  2:891527‑M2/89‑1 (MQ=255)
                                                                                   aaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCTATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATc                                                      <  1:533931‑M2/90‑1 (MQ=255)
                                                                                       gcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGcac                                                  >  2:581673‑M2/50‑142 (MQ=255)
                                                                                         gactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATTGGCCCGTCTTCGGTCATCACTACGTTCATGTCGGACTCCGCGCCAgagcattcaaggtatacaggatggcatag                                                >  1:688798‑M2/48‑129 (MQ=255)
                                                                                          actcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGAAGTCCAGATCGCAAAcc                                               >  2:674819‑M2/47‑143 (MQ=255)
                                                                                              atcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCTCCCGTCTTCGGTCGTCACTACGTTCCTGTCGGTCTCTGCGGCAGAGTCCTCCCCGTCTTCCAGGTCCCAAACCGCtt                                           >  2:105519‑M2/43‑143 (MQ=255)
                                                                                                cagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCg                                         <  2:464008‑M2/103‑1 (MQ=255)
                                                                                                     gcccgaaaaatcagttcggcagcgccgccttcggcCGCCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGTGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGtt                                    <  2:264610‑M2/108‑1 (MQ=255)
                                                                                                              atcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGCGTCTTCAACGTATTCCAGATCACAAACCGCTTCGCCGTTCAACATTcc                           >  2:642353‑M2/27‑143 (MQ=255)
                                                                                                              atcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTcc                           >  2:910699‑M2/27‑143 (MQ=255)
                                                                                                               tcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCg                          >  1:357144‑M2/26‑143 (MQ=255)
                                                                                                                 agtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGAc                        <  2:424431‑M2/120‑1 (MQ=255)
                                                                                                                 agtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGAc                        <  2:153073‑M2/120‑1 (MQ=255)
                                                                                                                  gtgtgccagcgccgccttctggCTCCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACa                       <  1:907863‑M2/121‑1 (MQ=255)
                                                                                                                   tttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAAttccgtccg                      >  2:904591‑M2/22‑139 (MQ=255)
                                                                                                                         agctccgcgttctgcCGTCCCCCGCACCTCAATGATGCGCCCGGCTTCGGTCATCCCTACGTTCATGTCGGCCTCTGCGGCATAGTCTTTAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTg                <  2:783794‑M2/128‑1 (MQ=255)
                                                                                                                         agcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTg                >  1:68498‑M2/16‑143 (MQ=255)
                                                                                                                          gcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTCCACAATTCCGACAGACACTGc               >  1:98569‑M2/15‑143 (MQ=255)
                                                                                                                          gcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCCGTCCCAattccgacacacccttc               >  2:789005‑M2/15‑135 (MQ=255)
                                                                                                                          gcgccgccttctgcCGTCCCCTACACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGCGTCTTCAACGTATTCCAGATCGCCAACCGCTTCGCCGTTCACAATTGCGACAGATACTGc               >  1:202895‑M2/15‑143 (MQ=255)
                                                                                                                            gcccccttctgtCGGCTCTTGCTCTTCAATGCTGCGCCCGTCTTCTGTCATCACGCCGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCgg             <  1:857415‑M2/131‑1 (MQ=255)
                                                                                                                                ccttctgtCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTCCCCCAACCCAACAGAAACTGCGACTAc         >  1:468883‑M2/9‑143 (MQ=255)
                                                                                                                                     tgcCGTGCCCTGCACTTCACTGCGTGGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGCGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATcc    <  1:470927‑M2/140‑1 (MQ=255)
                                                                                                                                     tgcCGTCCTCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATcc    <  1:220541‑M2/140‑1 (MQ=255)
                                                                                                                                     tgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATcc    <  2:355535‑M2/140‑1 (MQ=255)
                                                                                                                                       cCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCt  >  2:170025‑M2/2‑143 (MQ=255)
                                                                                                                                        |                                                                                                                                             
AAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT  >  NC_000913/3815804‑3816081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.