New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994982 (0.030)89 (1.210) 70/274 0.0 98.9% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

CGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGT  >  NC_000913/1300561‑1300840
                                                                                                                                         |                                                                                                                                              
cagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataata                                                                                                                                           >  2:954867‑M2/138‑143 (MQ=255)
         ataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGt                                                                                                                                  >  1:811135‑M2/129‑143 (MQ=255)
          taaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattcccctgcctttggtagaggaaagtgctaaATAATAATCAATTGtt                                                                                                                                 >  2:838986‑M2/128‑143 (MQ=255)
            aggatttccttaactgcttctcctcaccatcatgttattttcgacacatcataatcctgcgcttgctgaagaataattgaaatgatattattaattccactacctttggtagaggaaagtgctaaATAACAATCAATTGTTaa                                                                                                                               >  2:50819‑M2/126‑143 (MQ=255)
             tgatttccttaactgcttctcatgatcatcaggttattttctccacatcataatactgggcttgtggaagaacaattgaaatgatattattaattccactgccgttggtagaggaaagtgctaaATAATAATCAATTGTTaaa                                                                                                                              <  2:640190‑M2/19‑1 (MQ=255)
              gatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAat                                                                                                                             >  1:651717‑M2/124‑143 (MQ=255)
              gatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgataaATAATAATCAATTGTTAAat                                                                                                                             >  1:135208‑M2/124‑143 (MQ=255)
              gatttccttaactgattctcctcaccatcatgttattttcgccacatcataatcctgggctagctgaagaataattgaaatgatattattaattgcactgcctccggtagaggaaagtggtaaAAAATCACCACTCGTTAAat                                                                                                                             >  2:569324‑M2/124‑143 (MQ=255)
                 ttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattat                                                                                                                          >  2:1123811‑M2/121‑143 (MQ=255)
                   ccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                                                                        <  2:827166‑M2/25‑1 (MQ=255)
                        actgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAt                                                                                                                   >  1:91463‑M2/114‑143 (MQ=255)
                          tgcttctcctcaccatcatgttattttcgccacatcataatcctggtcttgctgaagaataattgacatgatattattagttccagccgggtttgtagaggaaagtgctaaATAATAAGCAATTGTTAAATTATTGTGCAttt                                                                                                                 <  2:586425‑M2/32‑1 (MQ=255)
                           gcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCattta                                                                                                                >  2:900566‑M2/111‑142 (MQ=255)
                               ctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCacta                                                                                                            >  1:1039112‑M2/107‑143 (MQ=255)
                                 cctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATCGTTAAATTATTGTGCATTTCactact                                                                                                          >  1:754605‑M2/105‑143 (MQ=255)
                                  ctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                                                                         <  1:243036‑M2/40‑1 (MQ=255)
                                   tcaccatcatgttattttcgccacatcatcatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCACTTGTTCAATTATTGTGCATTTCATTACTgg                                                                                                        >  2:517104‑M2/103‑143 (MQ=255)
                                   tcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTTTTGTGCATTTCACTACTgg                                                                                                        >  1:816488‑M2/103‑143 (MQ=255)
                                     cccactatgttattttcgccacatcataatcctgggcttgctgaanaataatggaaatgatattattaagtcctcngcctttggtagaggaaagngctaaANAATAATNAATTGTTAAATTATTGTGCATTTCACTACTGGaa                                                                                                      <  2:889898‑M2/43‑1 (MQ=255)
                                     accatcttgttatgttcgtcacatcataatcctggtcgtgctgaagaataagtgaaatgatattattgattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGaa                                                                                                      <  2:990005‑M2/43‑1 (MQ=255)
                                      ccctcatgttattttcaccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccacagccgttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAAc                                                                                                     <  1:779359‑M2/44‑1 (MQ=255)
                                       catcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAACTTATTGTGCATTTCACTACTGGAACt                                                                                                    >  2:1039876‑M2/99‑143 (MQ=255)
                                       catcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgccaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                                                                    <  1:1259394‑M2/45‑1 (MQ=255)
                                          catgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTa                                                                                                 <  2:104142‑M2/48‑1 (MQ=255)
                                           atgttattttcgccacatcataatcctgggcttgctgaagaataattgaaattatatgattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTaa                                                                                                <  1:958907‑M2/49‑1 (MQ=255)
                                            tgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAAt                                                                                               >  2:630206‑M2/94‑143 (MQ=255)
                                            tgttattttagcaacatcaaaatcatgggcttgcataagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAAt                                                                                               <  1:69231‑M2/50‑1 (MQ=255)
                                             ggtattttcgccacatcataatcctgggcttgccgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATc                                                                                              <  1:808992‑M2/51‑1 (MQ=255)
                                              ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCa                                                                                             >  2:52202‑M2/92‑143 (MQ=255)
                                                attttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGa                                                                                           >  1:860581‑M2/90‑143 (MQ=255)
                                                 ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaa                                                                                          >  2:1302287‑M2/89‑143 (MQ=255)
                                                 ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaa                                                                                          <  1:1103935‑M2/55‑1 (MQ=255)
                                                 ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaa                                                                                          <  1:32147‑M2/55‑1 (MQ=255)
                                                   ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                                                                        >  1:504036‑M2/87‑143 (MQ=255)
                                                       ccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATa                                                                                    >  1:647758‑M2/83‑143 (MQ=255)
                                                        cacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgtctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg                                                                                   <  2:546546‑M2/62‑1 (MQ=255)
                                                        cacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagatgaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg                                                                                   <  2:487715‑M2/62‑1 (MQ=255)
                                                         acgtcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGCTAGa                                                                                  >  1:518166‑M2/81‑143 (MQ=255)
                                                          catcataattctggtgttgttgaagaataattgtaatgatattattaattccactgccgttggtagaggaaagggctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGAc                                                                                 <  1:995000‑M2/64‑1 (MQ=255)
                                                               taatccggggcgtgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCt                                                                            <  2:414625‑M2/69‑1 (MQ=255)
                                                                aatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTCATCAGAAAAGATAGACATGCtt                                                                           >  2:295467‑M2/74‑143 (MQ=255)
                                                                 atcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                                                                          <  1:279173‑M2/71‑1 (MQ=255)
                                                                 atcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                                                                          <  2:816488‑M2/71‑1 (MQ=255)
                                                                   cctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTACTCTGAGAAGATAGACATGCttaca                                                                        >  1:1237423‑M2/71‑141 (MQ=255)
                                                                     tgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAATGATAAACATGCTTACCCa                                                                      >  2:1183592‑M2/69‑143 (MQ=255)
                                                                     tgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCa                                                                      >  1:995383‑M2/69‑143 (MQ=255)
                                                                      gggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctcaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCaa                                                                     >  2:587030‑M2/68‑143 (MQ=255)
                                                                       ggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAt                                                                    <  2:724450‑M2/77‑1 (MQ=255)
                                                                        gcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAAc                                                                                                     <  1:1058704‑M2/44‑1 (MQ=255)
                                                                        gcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAAc                                                                                                     >  2:1058704‑M2/66‑109 (MQ=255)
                                                                         cttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtct                                                                  >  1:1051215‑M2/65‑143 (MQ=255)
                                                                         cttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtct                                                                  >  1:225980‑M2/65‑143 (MQ=255)
                                                                               gaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAttt                                                            <  2:605645‑M2/85‑1 (MQ=255)
                                                                                aagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttg                                                           >  2:583358‑M2/58‑143 (MQ=255)
                                                                                 agaataattgaaatgatattattaattccacttcctttggtagaggaaagtgctaaATCATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttga                                                          <  1:838986‑M2/87‑1 (MQ=255)
                                                                                   aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgatt                                                        >  1:689370‑M2/55‑143 (MQ=255)
                                                                                     taattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattga                                                      >  2:372455‑M2/53‑143 (MQ=255)
                                                                                     taattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattga                                                      <  1:1135061‑M2/91‑1 (MQ=255)
                                                                                      aattgcaatgatattattaattccactgcgtttggtagaggaaagtgctatATCATAATCAATTGTTAAATTATTGTGCGGTTCACTACTGGAACTGTAATCAGAAAAGATAGTCATGCTTAGCCAATCTCTATTTGagtgaa                                                     <  2:88755‑M2/92‑1 (MQ=255)
                                                                                      aagtggagtgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaa                                                     <  2:1198274‑M2/92‑1 (MQ=255)
                                                                                       attgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat                                                    >  2:523583‑M2/51‑143 (MQ=255)
                                                                                        ttgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat                                                    >  2:946755‑M2/50‑142 (MQ=255)
                                                                                        ttgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat                                                    <  1:946755‑M2/93‑1 (MQ=255)
                                                                                           aaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa                                                <  2:1124887‑M2/97‑1 (MQ=255)
                                                                                           aaaagatattattaattcccctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa                                                <  2:725599‑M2/97‑1 (MQ=255)
                                                                                                ctatgattaattccactgcgtgtggtagaggaaagtgctaaATAATAAACAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtg                                           <  2:212175‑M2/102‑1 (MQ=255)
                                                                                                   ttattaattgctctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgttt                                        <  1:109210‑M2/105‑1 (MQ=255)
                                                                                                     attaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGCCATGCTTAGCCAATCTCTATTTGCTTGAATTGAAAGAtgtttgt                                      >  2:187172‑M2/37‑143 (MQ=255)
                                                                                                     attaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTAGCTTGAAGGGAAAGAtgtttgt                                      >  1:235104‑M2/37‑143 (MQ=255)
                                                                                                       taattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTa                                    >  2:973961‑M2/35‑143 (MQ=255)
                                                                                                       taattccactgcctttgggtgaggcaactgcaaaCTATCTATCTGATGGTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTa                                    <  1:954867‑M2/109‑1 (MQ=255)
                                                                                                        aattccattgccgttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAGTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCAAAGTCATTGAATTGAAAGATGTTTGTTaa                                   <  2:162215‑M2/110‑1 (MQ=255)
                                                                                                         attccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAg                                  >  1:313916‑M2/33‑143 (MQ=255)
                                                                                                          ttccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAgg                                 <  1:475733‑M2/112‑1 (MQ=255)
                                                                                                             cactgtctttgccagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGTAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCAt                              <  1:1119224‑M2/115‑1 (MQ=255)
                                                                                                             cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCAt                              <  1:372455‑M2/115‑1 (MQ=255)
                                                                                                               ctgtctttggtagtggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATgg                            <  1:255681‑M2/117‑1 (MQ=255)
                                                                                                               ctgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATgg                            <  1:491356‑M2/117‑1 (MQ=255)
                                                                                                                  cctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATg                         >  1:991382‑M2/24‑143 (MQ=255)
                                                                                                                  cctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTCGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATg                         >  2:232729‑M2/24‑143 (MQ=255)
                                                                                                                     ttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGACTTGAAAGATGTTTGTTAAGGCATGGATGCaa                      >  1:493529‑M2/21‑143 (MQ=255)
                                                                                                                     ttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCaa                      >  2:36463‑M2/21‑143 (MQ=255)
                                                                                                                       ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGCTTGAATTGAATGACGTTTGTTAAGCCCTGGATGCAAGc                    >  1:160080‑M2/19‑143 (MQ=255)
                                                                                                                       ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGc                    >  2:752523‑M2/19‑143 (MQ=255)
                                                                                                                       ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACAGTAATCAGTAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGc                    <  1:664687‑M2/125‑1 (MQ=255)
                                                                                                                           gaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCtata                >  2:176689‑M2/15‑143 (MQ=255)
                                                                                                                           gaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCtata                <  1:112856‑M2/129‑1 (MQ=255)
                                                                                                                               aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTTATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGAtt            <  1:609344‑M2/133‑1 (MQ=255)
                                                                                                                                aagtgttcaataataatCATTTGTTAAATTATTGTGCACTTCATCACTGGAAGTGACTTCAGACAACATCGACATGTTTCGCCACTCTCTATTTGCTTGAATTGAAAGTTGTTTGTTACGGCATGGATGCAAGCTATAGATTc           <  2:1260549/135‑1 (MQ=255)
                                                                                                                                aagagcaaaaTAATAAGCAGTTTTTAAAGTATTGTCCACTACATTACTGCAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATGTGATTGAATTGAAAGATGTTGGTTAAGGCATGGATGCAAGCTATAGATTc           <  2:270628/136‑1 (MQ=255)
                                                                                                                                  gtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTg         <  1:52202‑M2/136‑1 (MQ=255)
                                                                                                                                    ggtaaATAATAGTCAATTGTTAAATTATAATGCGTGTGACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGAt       <  1:1241616‑M2/138‑1 (MQ=255)
                                                                                                                                      taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATAc     >  1:1227031‑M2/4‑143 (MQ=255)
                                                                                                                                      taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATAc     >  1:247065‑M2/4‑143 (MQ=255)
                                                                                                                                      taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAAATTCTGATAc     >  2:655849‑M2/4‑143 (MQ=255)
                                                                                                                                        aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATACAAGCTATAGATTCTGATACgg   >  2:677173‑M2/2‑143 (MQ=255)
                                                                                                                                         ataataatCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGt  <  1:1081057/143‑1 (MQ=255)
                                                                                                                                         ataataatCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATACATTCTGATACGGt  <  2:1084212/143‑1 (MQ=255)
                                                                                                                                         ataataatCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGAAAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGt  <  2:647758/143‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                              
CGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGT  >  NC_000913/1300561‑1300840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.