New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1738878 =	50 (0.910)	4 (0.080)	3/268	8.1	7.8%	coding (921/933 nt)	ydhB	LysR family putative transcriptional regulator
	?	NC_000913	1738904 =	48 (0.930)					coding (895/933 nt)	ydhB	LysR family putative transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTT  >  NC_000913/1738736‑1739019                                                                                                                                               |                                                                                                                                              gTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGtt                                                                                                                                               >  2:516010/1‑143 (MQ=255)  tGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGCATACCGTCGTTCATCACGCGTTg                                                                                                                                              >  1:920237/1‑143 (MQ=255)     caCAGCCGTCAACTTCCTCTTGGATTGTATCGTCAACAAACGTGAAGAACCGCTGTCTCTTGAAGTGCATCCGCGCGTGATTGAACGCCGCTCCGTCGCTGCCGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCgg                                                                                                                                           <  1:504290/142‑1 (MQ=255)         gCGTGCAACATGCGGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTAAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGt                                                                                                                                       <  1:881517/143‑1 (MQ=255)           gTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGtct                                                                                                                                     <  2:120169/143‑1 (MQ=255)             tCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTctct                                                                                                                                   <  2:737356/143‑1 (MQ=255)               aaCATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTc                                                                                                                                 <  2:197596/143‑1 (MQ=255)                aCATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTcc                                                                                                                                <  1:187004/143‑1 (MQ=255)                 cctGCCGTTGGATCGCATCGTCAACAAACGTGAAGACCCGCAGTCTATTGAAGTGCATCCGCGCTTGATTCACCCCCGCTCCGTGGCTCACGGCCCGTTCCTCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCg                                                                                                                               <  1:19278/141‑1 (MQ=255)                        ttGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCg                                                                                                                        >  1:309260/1‑143 (MQ=255)                        ttGGAGCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCACGTGCCGCGCCGACCGTCGTTAATCACGCGTTGCGGGGGGCTCCTCCgccggccg                                                                                                                        >  1:462536/1‑136 (MQ=255)                           gATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAg                                                                                                                     <  2:401580/143‑1 (MQ=255)                           gATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGGCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAg                                                                                                                     >  1:610103/1‑143 (MQ=255)                                   cgtCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCt                                                                                                             <  2:294289/143‑1 (MQ=255)                                     tCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCGTCCGGCTCCCGCCGCCACCCCttc                                                                                                           >  1:758959/1‑142 (MQ=255)                                      caacaaACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTAt                                                                                                          <  2:309260/143‑1 (MQ=255)                                              gTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGtc                                                                                                  >  2:753964/1‑143 (MQ=255)                                                    aaCCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTCTCGTCGCTAATCACCCCTTGCGGGAGTCTCTTCCTGCCCCCGCGGCGACTCCTTCTCCACCGCCTCAcca                                                                                            >  1:443608/1‑141 (MQ=255)                                                      ccGCAGTCTATTGAAGTGCATCCGCGGTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTAGCGTCGTTAATGACGCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATc                                                                                          <  1:579311/143‑1 (MQ=255)                                                      ccGCAGGCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTACTCACCCGTCGCGGCAGGCTCCTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCGCACtctc                                                                                          >  1:314717/1‑143 (MQ=255)                                                          aggccaTTGAAGTGCATCCGCGCTTGATTGAACGCCGCGCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCg                                                                                      <  2:188907/138‑1 (MQ=255)                                                             cTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCgtga                                                                                   <  1:913986/143‑1 (MQ=255)                                                                     gTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTTATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGCGCGACTCAAg                                                                           >  2:125688/1‑143 (MQ=255)                                                                            cgcgCTTGATTGAACGCCGCTCGGGGGCGGACGGCCCGTTCCGTGACTATCGGCGTTAATCACCCGTTGCGCGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACGATCGCCGAGATACTCAAGCAACCAg                                                                    <  1:610164/143‑1 (MQ=255)                                                                            cgcgCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAg                                                                    >  2:916639/1‑143 (MQ=255)                                                                                     ttgaACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGCGCTACTCAAGCAACCAggctccccca                                                           >  2:647123/1‑135 (MQ=255)                                                                                     ttgaACGCCGCGCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCa                                                           <  2:497990/143‑1 (MQ=255)                                                                                        aaCGCCGCGCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCCGCGTCTCACCATCGCCGCGCTCCTCAAGCAACCggggcaccgcacga                                                        >  1:296130/1‑132 (MQ=255)                                                                                           gccgcTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCTACACGGTCCGCGAGCAACCAGGGTAACGGAGGccgc                                                     >  1:534897/1‑140 (MQ=255)                                                                                                  cGTGGCTGACGGCCCGTTCCGCGACGATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCAt                                              <  2:165823/143‑1 (MQ=255)                                                                                                       cttaCGGCCCGTTCCGCGACTATCGTCGTTAATCATCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTtgc                                         <  2:512488/140‑1 (MQ=255)                                                                                                          aCGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTtgctgc                                      <  2:658802/143‑1 (MQ=255)                                                                                                           cGGCCCGTCCCGCGACTATCGTCTTTAATCACCCGTTGCGTGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGcc                                     <  1:850343/143‑1 (MQ=255)                                                                                                            ggCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCa                                    <  2:610103/143‑1 (MQ=255)                                                                                                            ggCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCa                                    <  2:450346/143‑1 (MQ=255)                                                                                                                cGTTCCGCGACTAGCGTCTTTAATCACCCGTTGCGGGAGCCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGTTTAACGCAGGCGACATATCATTTTGCTGCCATGTc                                <  2:363842/143‑1 (MQ=255)                                                                                                                 gTTCCGCGGCTGTCGCCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCa                               <  1:147871/143‑1 (MQ=255)                                                                                                                 gTTCCGCGACTATCTTCGTTAATCCCCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCTCTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCa                               <  1:379496/143‑1 (MQ=255)                                                                                                                    ccGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCCGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACCCACGCAACCCGGTTAACGCAGGCGACATATCATTTTGCTGCCCTGGCAGac                            >  1:692368/1‑143 (MQ=255)                                                                                                                    ccGCGACTAGCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTACCGCAGGCGACATATCATTTTGCTGCCATGTCAGac                            <  2:405741/143‑1 (MQ=255)                                                                                                                            aTCGTCCTTAATCACCCTTTGCGGGAGTCTCTTCGGGCTCCCGCAGCCCCTCCTTATTCAGCGTCTCACTCTCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGcc                    <  1:894613/143‑1 (MQ=255)                                                                                                                                tcgtTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAAt                >  2:814469/1‑143 (MQ=255)                                                                                                                                  gtTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCCGGCGACATATCATTTTGCTGCCATGTCAGACCACATGCCGACTcc              >  2:629397/1‑143 (MQ=255)                                                                                                                                   ttagccACCCTGTGCGTGAGTCTCTTCCGGCCCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCg             <  1:268454/138‑1 (MQ=255)                                                                                                                                    gaagcACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCgg            <  2:921459/139‑1 (MQ=255)                                                                                                                                     aaTCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGa           <  2:318102/143‑1 (MQ=255)                                                                                                                                         aCCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAATCATCCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGCCACCATGCCGAATCCGGAAAgg       >  2:598911/1‑143 (MQ=255)                                                                                                                                          cccGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAggg      >  1:427644/1‑143 (MQ=255)                                                                                                                                          cccGTGGCGCGGGTCTCTCCCGGCGCCCGCAGCCACTCCTTATTCAGCGGCTCCCTAGCGCCGGGATACGCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAggg      <  1:874584/143‑1 (MQ=255)                                                                                                                                              ttGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACCCAGGCGACATATCCTTTTGCTGCCATGTCAGACAACATGCCGCATCCGGACACTGGttt  >  2:258434/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                              GTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAATCACCCGTTGCGGGAGTCTCTTCCGGCTCCCGCAGCCACTCCTTATTCAGCGTCTCACTATCGCCGAGATACTCAAGCAACCAGGTTAACGCAGGCGACATATCATTTTGCTGCCATGTCAGACAACATGCCGAATCCGGAAAGGGGTTT  >  NC_000913/1738736‑1739019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.