New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2371623 =41 (1.030)3 (0.080) 3/276 5.8 7.2% coding (718/1653 nt) arnT 4‑amino‑4‑deoxy‑L‑arabinose transferase
?NC_000913 2371663 = 38 (0.980)coding (758/1653 nt) arnT 4‑amino‑4‑deoxy‑L‑arabinose transferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTGGCTGGCGGTTATCAGTTGCGTACTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCGGTGCACTGTACACAGGCTGGAAAAACCGCAAGCATTCCGCAACCGTCTATTTGTTGAGCTGG  >  NC_000913/2371528‑2371796
                                                                                                                                       |                                                                                                                                     
gcggggcggcGGTTATCGGGTGCGTACTGACGGTTCGTCCTGGGGGACTTGTGATAGCGCAGGGGGAGCCTCACTGCTGGCACGATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCt                                                                                                                                <  2:516289/136‑1 (MQ=255)
 ctggctggCGGTTATCAGTTGCGTACTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAGCGTCTGGCACTATTTATTCTGCGTTGAGCATATGCAACGCTTTGCACTGGCTGATGCCCGACATCGCGCTc                                                                                                                               >  2:567446/1‑143 (MQ=255)
    gctggcGGTTATCAGTTGCGTACTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGCCTGCTCAGATTCAACGCTTTGCACTGGCTGATGCCCAACATAGAGCTCCGt                                                                                                                            >  1:475817/1‑143 (MQ=255)
        gcGGTTATGAGTTGCGTACTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTg                                                                                                                        <  2:644538/143‑1 (MQ=255)
        gcGGTTATCAGTTGCGTACTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTg                                                                                                                        <  2:502972/143‑1 (MQ=255)
        gcGGTTATCAGTTGCGTACTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTg                                                                                                                        <  2:517927/143‑1 (MQ=255)
            ttATCAGTTGCGTACTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCATCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGCTGATGCCCAACATAGAGCTCCCTTCTGGtgc                                                                                                                    >  1:365027/1‑141 (MQ=255)
            ttATCAGTTGCGTACTGACGGTGCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGtac                                                                                                                    <  2:478258/143‑1 (MQ=255)
             caTCAGCTCCGTACTGACGGTCCTCCCTTGGGCACTGCCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGtact                                                                                                                   <  1:353207/142‑1 (MQ=255)
               tCAGTTGCGTACTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAACGTCTGGCACTATTTTTTCTGGGCTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGtactac                                                                                                                 >  2:43190/1‑143 (MQ=255)
                     tggTACTGACGGTTCTCCCTGGGGGACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCAGATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCg                                                                                                           <  2:194929/141‑1 (MQ=255)
                     gCGTACTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCg                                                                                                           <  2:474774/143‑1 (MQ=255)
                      ctgccTGACGGTTATGCCTGGGGGACTGGCGATAGGGTAGCGGGCGCCTAACAATTGCCAGTATGTTTTCTGGGTTGAGCATATTCATCGCTGTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCgg                                                                                                          <  2:417620/139‑1 (MQ=255)
                         aCTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGAGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTGCTGGTACTACGTAccacgca                                                                                                       >  2:616266/1‑138 (MQ=255)
                                  tcgccctctgggACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCg                                                                                              <  2:227965/134‑1 (MQ=255)
                                                tGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCCACATAGAGCTCCGTTCTGGTCCTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTgg                                                                                >  2:474914/1‑143 (MQ=255)
                                                  gCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTCTTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTGGTCTGTCGCGGCt                                                                              >  2:125524/1‑143 (MQ=255)
                                                      tAGCGCAGCGGGAGCCTATCTTCTGGCGCTATTTTTTCTGGCTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGa                                                                          <  2:501783/143‑1 (MQ=255)
                                                               gccaccccaaCTTCTGGACCTGCTTTTTCTGGGTTGAGCATCTTCAACGCTTTGCACTGGCTGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTcccc                                                                 <  1:123342/135‑1 (MQ=255)
                                                                 gAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCgg                                                               <  1:688555/143‑1 (MQ=255)
                                                                    tctgaCTTCTGGCACTCGTTGTGCTGGGTTGAGCAGAGTCAACGCCTTGCACTGGATGATGCCCAACATAGAGCTCCGTGGTGGTACTACGTGCCGGTCATCATTGCCAGTAGCCTGCCGTGGCTGGGATTACtactcgcggc                                                            <  2:120070/139‑10 (MQ=255)
                                                                     cTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCGGTGCa                                                           <  1:192876/143‑1 (MQ=255)
                                                                     cTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGCCTGGGAATATCCCGCCGTGCa                                                           >  2:408678/1‑143 (MQ=255)
                                                                     cTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCACGTCATCATTGCCGGTAGCCTGCCGTGGCTGGCATTACTCGCAGGTGCa                                                           >  2:179099/1‑143 (MQ=255)
                                                                         cTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACGTGGAGCTCCGTTCTGGTACTACGTGCGGGGCATCATTGCCGGTAGCCTGCCGTGGCGGGGCGTGCTGCCCGGTCCCCTGt                                                       >  2:347220/1‑143 (MQ=255)
                                                                          ttCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCGGTGCACTGTa                                                      <  1:59498/143‑1 (MQ=255)
                                                                          ttCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCGGTGCACTGTa                                                      <  1:59492/143‑1 (MQ=255)
                                                                                    aTTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCCACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGCTTACTCCCCGGTGCGCTGTCCGCAGGCTgg                                            >  1:273629/1‑143 (MQ=255)
                                                                                        tttCTGGGTGTATCATAGTCAACGTTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCTGGTGCACTGTACACAGGCTGGaaaa                                        <  2:347192/143‑1 (MQ=255)
                                                                                         ttCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCAGGTGCACCGGGCACAGGGTGTgaaaa                                       >  1:316080/1‑143 (MQ=255)
                                                                                              ggTTGAGCCTATGCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTCCTCCCCGGTGCACTGTACACAGGCTGGAAAAACCGCa                                  <  2:270193/143‑1 (MQ=255)
                                                                                                ttGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCGGTGCACTGTACACAGGCTCGGAAAACCGCAAg                                >  2:521135/1‑143 (MQ=255)
                                                                                                 tGAGCATATTCAACGCTTTGCACTGGATGCTAACCAACAAAGTGCTCCGTTCTGGTACTGCGTGCCGGTCATGATTGCCGGTAGCCTGCCGTAGCTGGGATTACTCACCGGTGCACTGTACACAGGCTGGAAGAACCGAAAGc                               >  2:341415/1‑143 (MQ=255)
                                                                                                            aaCGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCGGTGCACTGTATACAGGCTGGAAAAACGGGAAGCATTCCGCAAcc                    >  2:419732/1‑143 (MQ=255)
                                                                                                            aaCGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCGGTGCACTGTACACAGGCTGGAAAAACCGCAAGCCTTCCGCaccg                    >  2:653571/1‑140 (MQ=255)
                                                                                                              cGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTGCTGGAACTACGTGCCGGGGATCAGTGCCGGTAGCCGGCGGTGGCTGGGGTTACCTCCCGGTGCAGTGTAGACAGGCAGGAAAAACCGCAAGCAGTCGGCCACCGt                  >  2:157052/1‑143 (MQ=255)
                                                                                                                     cACTGGAGGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCGGTGCACTGTACACAGGCTGGAAAAACCGCAAGCATTCCGCAACCGTCTATttg           <  1:630647/143‑1 (MQ=255)
                                                                                                                              atgCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCGGTGCACTGTACACAGGCTGGCAAAACCGCAAGCATTCCGCAACCGTCTACTTGCTGAGCTgg  >  2:412576/1‑143 (MQ=255)
                                                                                                                                       |                                                                                                                                     
GCTGGCTGGCGGTTATCAGTTGCGTACTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCGGTGCACTGTACACAGGCTGGAAAAACCGCAAGCATTCCGCAACCGTCTATTTGTTGAGCTGG  >  NC_000913/2371528‑2371796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.