New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	377368 =	NA (NA)	3 (0.080)	3/270	5.4	NA	noncoding (34/187 nt)	REP32 (repetitive extragenic palindromic) element, contains 4 REP sequences	REP32 (repetitive extragenic palindromic) element, contains 4 REP sequences
	?	NC_000913	2139702 =	NA (NA)					noncoding (1/37 nt)	REP146 (repetitive extragenic palindromic) element, contains 1 REP sequences	REP146 (repetitive extragenic palindromic) element, contains 1 REP sequences
Rejected: Coverage evenness skew score above cutoff.

CCAGGGTGGTGGAGATTGAGCCACCCTGGCACGTTCA‑CCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTATTCCGCTCGGCCCAGTCATTCAGGCGACGTTTCG  >  NC_000913/2139572‑2139844                                                                                                                                    |                                                                                                                                               ccAGGGTGGTGGAGATTGAGCCACCCTGGCACGTTCA‑CCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACg                                                                                                                                    >  2:365977/1‑143 (MQ=255)     ggtggtGGAGATTGAGCCACCCTGGCACGTTCA‑CCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCttt                                                                                                                                >  2:3007/1‑143 (MQ=255)     ggtggtGGAGATTGAGCCACCCTGGCACGTTCA‑CCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCttt                                                                                                                                >  2:463711/1‑143 (MQ=255)       tggtggAGATTGAGCGTCCCTGGCACGTTCT‑CCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTAc                                                                                                                              <  1:500993/143‑1 (MQ=255)         gtggAGATTGAGCCACCCTGGCACGTTCA‑CCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGCCGCTCTAcgc                                                                                                                            >  1:123800/1‑143 (MQ=255)           ggAGATTGAGCCACCCTGGCACGTTCA‑CCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGAACTTAAAAATTCAGAATATAATGATGGCGCCAAGAACGCCTGGTGCTACGCTTTAcgcgc                                                                                                                          >  1:450048/1‑142 (MQ=255)              tgtggAGCCATTCTGGCTCGTTCATCGGGCTTG‑TCGTTGCATATTAGCTAGGAACATCACGTGATCGGTACAGCCTTCGTTTTTACATATTCTGAATTTATTGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCtt                                                                                                                       <  1:217018/139‑1 (MQ=255)                ttGAGCCACCCTGGCACGTTCA‑CCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTAt                                                                                                                     <  2:140113/143‑1 (MQ=255)                                     a‑CCGGCTTGAGCGTTCCATAGTAGCGCGGACGCAGAGGGGAACGGGACAGCCTTCGATCTTACATAACCAGAACTTAGTAGTGGCGCCACTAACTCCGGACGCGACGCGCAACGCGTCTTATCATGCCTACAGGACTGGTCAc                                                                                                >  1:330293/1‑143 (MQ=255)                                       ccGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGAAGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCAcc                                                                                               >  2:601157/1‑143 (MQ=255)                                        cGGCTTGATCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGTCTTCGATCTTACATATTCAGAATATAATGATGCCGCCATGAACGCCTGATGCGACGCTTTACGCGTTTTATCAGGCCTACAGGACTGGTCACCt                                                                                              <  2:524183/143‑1 (MQ=255)                                            ttGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTCGTCACCTGGTa                                                                                          >  2:416423/1‑143 (MQ=255)                                                   ttCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACa                                                                                   <  2:371221/143‑1 (MQ=255)                                                     acATAGTATCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACAtc                                                                                 <  1:513016/142‑1 (MQ=255)                                                      cATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACAtct                                                                                >  2:583175/1‑143 (MQ=255)                                                          gtagCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTtctc                                                                            <  1:324816/143‑1 (MQ=255)                                                          gtagCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTtctc                                                                            <  1:25761/143‑1 (MQ=255)                                                           tagCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTcc                                                                           >  2:542563/1‑143 (MQ=255)                                                           tagCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTcc                                                                           >  2:607935/1‑143 (MQ=255)                                                                aGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGACGCCGCCACGAACGCCTGATGCGACGCATTACGCGTCCTATCACGCCTACAGGACAGGTCACCCGGTAACCTACATCTTCTcccggaa                                                                      >  1:122048/1‑138 (MQ=255)                                                                      aTCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGCCTGGTCACCTGGTAACCTACACCTTCTCCAGCAActtctt                                                                >  2:260090/1‑143 (MQ=255)                                                                      aTCAAGCGAACGGAACAGCCTTCGATCTTACGTATTCAGAATGTAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAActtctt                                                                <  2:575852/143‑1 (MQ=255)                                                                          aGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTcaca                                                            >  1:38533/1‑143 (MQ=255)                                                                           gTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACAt                                                           >  2:518087/1‑143 (MQ=255)                                                                            tGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCCGCAACTCCTTCACATc                                                          >  1:397653/1‑143 (MQ=255)                                                                               aCGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCttt                                                       <  1:393764/143‑1 (MQ=255)                                                                                 gtaaCAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGc                                                     <  1:70331/141‑1 (MQ=255)                                                                                 ggAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCCGCAACTTCTTCACCTCTTTGc                                                     >  2:453842/1‑143 (MQ=255)                                                                                      aGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTa                                                >  2:583537/1‑143 (MQ=255)                                                                                        ccTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACg                                              >  2:613881/1‑143 (MQ=255)                                                                                          atcaaTCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGACTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTCCACATGTTAGCCATTACggg                                            >  1:449869/5‑143 (MQ=39)                                                                                            cGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCTGGCCTACAGGACTGGTCAACTGGTAACATACATCTTCTCCAACAACTTCTTCACATCTTTACCACTACGGGaa                                          >  2:407311/1‑143 (MQ=255)                                                                                            cGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGaa                                          >  2:478869/1‑143 (MQ=255)                                                                                                 ttACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGGATCttt                                     >  2:486201/1‑143 (MQ=255)                                                                                                 ttACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCttt                                     >  2:611636/1‑143 (MQ=255)                                                                                                  tACCTATTCAGAATATAATGATGCCGCCACGACCGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTa                                    <  1:4074/143‑1 (MQ=255)                                                                                                  tACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGGCCACAGGACCGGCCACCTGGTAACCTACACTTTCTCAAGCACCTTCTCCACACCTTTGCCATTCCGCGGATCtctt                                    >  1:438277/1‑140 (MQ=255)                                                                                                           aGACTATAATGATGCCGCCGCGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTATTCCGCTCg                           <  1:34920/143‑1 (MQ=255)                                                                                                           aGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTATTCCGCTCg                           <  2:66675/143‑1 (MQ=255)                                                                                                           aGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCGTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTATTCCGCTCg                           <  1:321099/143‑1 (MQ=255)                                                                                                            gAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTCTTCCGCTCgg                          >  2:274021/1‑143 (MQ=255)                                                                                                            gAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGAAGTGGTCACCTGGTAACCTAGATCTTCTCCGGCACCTTCTTCACATCTTTGCCATTACGGGAAGCTTTATTCCGCTCgg                          >  2:115160/1‑143 (MQ=39)                                                                                                             aaTATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTATTCCGCTCGGc                         <  1:463711/143‑1 (MQ=255)                                                                                                               tataATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTATTCCGCTCGGccc                       >  1:183281/1‑143 (MQ=255)                                                                                                                   ctgatgCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCCTCTCTTTGCCATTACGGGAATCTTTATTCCGCTCGGCCCAGTc                   <  2:348105/142‑1 (MQ=255)                                                                                                                          ctccACGAACTCCTGATGCAGCGCTTTACTCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTATTCCGCTCGGCCCAGTCATTCAgg            <  1:507806/141‑1 (MQ=255)                                                                                                                          cgccACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCGACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTATTCCGCTCGGCCCAGTCATTCAgg            <  2:75835/143‑1 (MQ=255)                                                                                                                           gccACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGTACTGTTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTATTCCGCTCGGCCCAGTCATTCAGGc           <  1:206164/143‑1 (MQ=255)                                                                                                                                    gCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTATTCCGCTCGGCCCAGTCATTCAGGCGACGTTTCg  >  1:119879/1‑143 (MQ=255)                                                                                                                                    gCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTATTCCGCTCGGCCCAGTCATTCAGGCGACGTTTCg  >  2:542911/1‑143 (MQ=255)                                                                                                                                    |                                                                                                                                               CCAGGGTGGTGGAGATTGAGCCACCCTGGCACGTTCA‑CCGGCTTGAGCGTTCCATAGTAGCGAGGAACATCAAGTGAACGGAACAGCCTTCGATCTTACATATTCAGAATATAATGATGCCGCCACGAACGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAGGACTGGTCACCTGGTAACCTACATCTTCTCCAGCAACTTCTTCACATCTTTGCCATTACGGGAATCTTTATTCCGCTCGGCCCAGTCATTCAGGCGACGTTTCG  >  NC_000913/2139572‑2139844

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.