New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 153986 =2 (0.040)92 (1.840) 51/282 0.0 97.9% coding (1441/2598 nt) htrE putative outer membrane usher protein
?NC_000913 = 275149 NA (NA)intergenic (‑32/‑176) insH1/mmuP IS5 transposase and trans‑activator/CP4‑6 prophage, putative S‑methylmethionine transporter

CGGATGATAAAACATACCAGGGGCAAAGTTATCGTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/154126‑153986
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  <  NC_000913/275149‑275008
                                                                                                                                                                                                                                                                                            
CGGATGATAAAACATACCAGGGGCAAAGTTATCGTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAAATACCTTGGTCTTAATGATGCACTAACTATAAGG                                                                                                                                               >  2:702291/1‑143
       TAAAACATACCAGGGGCAAAGTTATCGTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGC                                                                                                                                        >  2:698077/1‑143
        AAAACATCCCAGGGGCAAAGTTATCGTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCG                                                                                                                                       <  2:597185/143‑1
           ACATACCAGGGGCAAAGTTATCGTGTGTCCTGGAACAGGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAAC                                                                                                                                    <  1:865005/143‑1
            CATACCAGGGGCAAAGTTATCGTGTTTCCTGGAACAAGTTATTCGAAGAACCAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTCGGTCTTAATGATGCACTACCCCTAAGGAAGGTGCGAACA                                                                                                                                   >  1:349057/1‑143
             ATACCAGGGGCAAAGTTATCGTGTTTCCTGGAACAAGTGATTCGAAGAAACAAGTACTTCACTGAATATTGCGGCCTATCGCTATTCGACACATAATTTCCTTGGTTTTAATGTTGCACTAACTCGAAGGAAGGTGCGAACAA                                                                                                                                  <  2:389841/143‑1
               ACCAGTGGCAAAGTTATCGTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGT                                                                                                                                <  1:540783/143‑1
                     GGCAAAGTTATCGTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACCTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTTTTTGTGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGA                                                                                                                          <  1:188841/143‑1
                        aagGTTATCGTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATAT                                                                                                                       <  1:668572/140‑1
                          AGTTATCGTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGCTGACCACCCTCTGGGTGAGGGGCGAAAAAGTCCCTGATATGA                                                                                                                     >  2:594865/1‑143
                            TTATCGTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGA                                                                                                                   >  2:205636/1‑143
                             TATCGTTTTTCCTGGAACAAGTTATTCGAAGAATCAAGTACTTCACTGAATATCGCGGCGTATAGCTCTTAGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGAT                                                                                                                  <  1:16573/143‑1
                                 GTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATAT                                                                                                                       <  1:278512/134‑1
                                 GTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATAT                                                                                                                       >  2:278512/1‑134
                                    ttgCCTGGAACCAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT                                                                                                           <  2:20587/140‑1
                                    TTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTa                                                                                                           >  1:567012/1‑142
                                    TTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT                                                                                                           <  1:529468/143‑1
                                       acggggacatggTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGGCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTC                                                                                                        <  1:517313/131‑1
                                        CTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGACGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA                                                                                                       >  1:152058/1‑143
                                           GAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCT                                                                                                    >  2:821447/1‑143
                                                 GTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCC                                                                                              <  1:687715/143‑1
                                                    ATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATA                                                                                           >  1:396516/1‑143
                                                     TTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGCGCCATAG                                                                                          >  2:172249/1‑143
                                                       CGAAGAAACAAGTACGTGACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAA                                                                                        <  1:870946/143‑1
                                                        GAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAAC                                                                                       >  1:511811/1‑143
                                                        GAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAAAATTGCCTTGGGCTTAATGATGCACTCACTCTAAGGAAGGTGCGCACAAGTCCCTGATCTGCGATCACGTTTGTCATCTGGCGCCttgtccc                                                                                       >  2:713676/1‑136
                                                         AAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACA                                                                                      >  2:58840/1‑143
                                                         AAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTAATCTGGAGCCATAGAACA                                                                                      >  1:498659/1‑143
                                                          AGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAG                                                                                     >  2:851145/1‑143
                                                           GAAACTAGTACTTCACTGAATATCGCGGCCTAGCGCTATTCGACACAGAATTAGCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG                                                                                    <  1:875962/143‑1
                                                           GAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG                                                                                    <  2:250461/143‑1
                                                           GAAACAAGTACTTCACCTAATATCGCTGCCTATCGCTATTCGACACAGAATTACGTTGTTCTTAATGATGCACTATCTCTAAGGAAGGTGCTAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG                                                                                    <  1:735617/143‑1
                                                           GAAACAAGTACACCATTGAATATCGCGGTCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGTGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG                                                                                    <  1:495283/143‑1
                                                                      TTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGA                                                                         <  2:53510/143‑1
                                                                                ATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGCACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATCGCACAGCGTTCATCACGAGTCATCAACT                                                              >  1:130283/1‑143
                                                                                ATCGCGGCCGATCGCGAGTCGACACGGAATTACCTTGTTCTTAAGGATGCACTAACTCTAAGGAAGGTGCGAAGAAGTCCCTGATAGAAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACT                                                              <  1:579546/143‑1
                                                                                 TCGTGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGCGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTT                                                             <  1:244553/143‑1
                                                                                 TCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTT                                                             <  2:430681/143‑1
                                                                                 TCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTT                                                             <  2:577065/143‑1
                                                                                   ggGGCCGATCGCTATTCGACACAGAATTACCTGGGTCGTAATGATGCACTAAATCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTAC                                                           <  2:821040/141‑1
                                                                                   GCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTATCATCTGGAGCCATAGAACAGGGTTCATCATGAGGCATCAACTTAC                                                           >  1:365751/1‑143
                                                                                        CTAGCGCTATTCGACACAGAATGACCTTGGTCTTAATGATGTAGTAACTCTAAGGAACGTGCGAACAAGCCCCTGATATGAGATCTAGCTTGACATCTGCAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCG                                                      <  1:810302/143‑1
                                                                                         TATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGC                                                     >  2:798788/1‑143
                                                                                         TATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGC                                                     >  2:796855/1‑143
                                                                                          ATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCC                                                    >  1:451339/1‑143
                                                                                          ATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGGTCATCATGAGTCATCAACTTACCTTCGCC                                                    >  2:464535/1‑143
                                                                                           TCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGGTCATCATGAGTCATCAACCTACCTTCGCCG                                                   >  2:257689/1‑143
                                                                                               TATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAGGGAAGGTGCGAACAAGTCCCTGCTATCACATCATGTTTGTCATCTGTAGCCATAGAACAGGGTTCAGCATGAGTCTCAGACTTACCTTCGCCGACAG                                               >  1:340795/1‑143
                                                                                               TATTCGACACAGAATTACCTTGGTATTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGACATCAACTTACCTTCGCCGACAG                                               >  1:443946/1‑143
                                                                                                 TTCGACACAGAATTACCTTGGTCTTAATGAGGCACTAACTCTAAGGAAGGAATGGTTTAATCCCGTTTATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG                                             <  2:641108/143‑1
                                                                                                     ACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAAct                                         >  1:712391/1‑141
                                                                                                      tACATAATTACCTTCGTCTTAATGAGTCACTAACTCTAATGAAGGTTCTAACATGTCCCTGATATTAGATCATTTTTGTCATCTGTAGCCATAGAACAGTGTTCATCATGATTCATCAACTTACCTTCGCCGACAGTGAATTC                                        <  1:847413/142‑1
                                                                                                          ggtTTATCTTAGTCGTAAGGATGCCCTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATTATGTTTGTCATCTGGAGCCATAGAAAAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCATCA                                    <  1:842393/140‑1
                                                                                                          GAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCA                                    <  2:478951/143‑1
                                                                                                          GAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCA                                    <  2:883206/143‑1
                                                                                                          GAATTACCTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCA                                    <  2:253579/143‑1
                                                                                                                 CTTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAGAGCGAATTCAGCAGTAAGCG                             >  2:810046/1‑143
                                                                                                                  TTGGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGC                            >  1:498092/1‑143
                                                                                                                    GGTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTGATCTGGAGCCATAGAACAGGGTTCAGCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCG                          >  2:481265/1‑143
                                                                                                                     GTCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGAGATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGT                         <  2:173900/143‑1
                                                                                                                      TCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACCGTGAATTCAGCAGTAAGCGCCGTC                        >  1:359250/1‑143
                                                                                                                      TCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAGTTCAGCAGTAAGCGCCGTC                        >  2:170879/1‑143
                                                                                                                      TCTTAATGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTC                        >  2:85922/1‑143
                                                                                                                         TAATGATGCACTAAGTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGA                     <  1:706470/143‑1
                                                                                                                           ATGATGCACTAACTCTAAGGAAGGTGCGAACGAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGCACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACC                   >  1:524132/1‑143
                                                                                                                            TGATGCACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCAATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCAGTCAGACCA                  >  1:545447/1‑143
                                                                                                                                 CACTAACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAA             <  2:681134/143‑1
                                                                                                                                   cattggcgAAGGAAGGTGCGAACAAGGCCCTGATAGGAGATCATGTGTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGA           <  1:464779/135‑1
                                                                                                                                     AACTCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTGAGACCAGAAAACAGA         >  2:237006/1‑143
                                                                                                                                        TCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTT      >  2:755614/1‑143
                                                                                                                                         CTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTT     <  1:838063/143‑1
                                                                                                                                         CTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA                                                >  1:133925/1‑100
                                                                                                                                         CTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA                                                <  2:133925/100‑1
                                                                                                                                         CTAAGGAAGGTGCGAACAAGTCCATGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTT     >  1:872004/1‑143
                                                                                                                                          gAAGGAAGGTGCGAAGAAGTCCCTGATATGAGATCAGGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC    <  1:690558/142‑1
                                                                                                                                          TAATGAAGGTGCGAACGAGTGCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGTTTCATCATGAGTCATCAACTTACCTGCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC    <  1:692983/143‑1
                                                                                                                                          TAATGAAGGTGCGAACAAGTCCATGATTTGAGGTCATGTTTTTCATCTGTAGCCATAGAACAGGGTTCAGCATGAGTCATCAACATACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC    <  1:309703/143‑1
                                                                                                                                          TAAGGAAGGTGCGATCAAGTCCCTGATATTAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC    <  2:60068/143‑1
                                                                                                                                          TAAGGAAGGTGCGACCAAGTCCCTGATATGAGATCATGTTTGCCATCTGGAGCCATAGAACAGGGTTCATCATGACTCATCAACTTACCGTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC    <  2:503565/143‑1
                                                                                                                                          TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAATTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGCCAGACCCGAAAAGAGCTTTTC    >  1:430837/1‑143
                                                                                                                                          TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC    <  2:300129/143‑1
                                                                                                                                          TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC    <  2:511811/143‑1
                                                                                                                                          TAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATCTTC    >  2:854602/1‑143
                                                                                                                                           AAGGAAGGTGCGAACAGGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCT   <  1:861681/143‑1
                                                                                                                                           AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCT   >  2:10957/1‑143
                                                                                                                                           AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCT   >  1:418023/1‑143
                                                                                                                                           AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCT   <  1:366795/143‑1
                                                                                                                                            AGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTATGCGCCGTCAGACCAGAAAAGAGATTTTCTT  <  2:691818/143‑1
                                                                                                                                            AGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  >  1:520074/1‑143
                                                                                                                                            AGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  >  2:166249/1‑143
                                                                                                                                            AGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  <  1:264961/143‑1
                                                                                                                                            AGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATGTTCTT  >  2:335751/1‑143
                                                                                                                                                                                                                                                                                            
CGGATGATAAAACATACCAGGGGCAAAGTTATCGTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/154126‑153986
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  <  NC_000913/275149‑275008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.