| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 2 (0.040) | 36 (0.720) | 33/282 | 0.5 | 94.7% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 2 (0.040) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGC > NC_000913/4001501‑4001780 | cAGTATGTCTTGATCTTGTCGAACCGGATGACGACGAGCGACTGCGCGTACAATCTGACCTTGGCCAGACCCTGGCAACCCGCCCGGAACTGGAAGACACCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCat < 2:251468/143‑1 (MQ=255)cAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTTGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCat < 2:717847/143‑1 (MQ=255)cAGTAGGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCat < 2:166266/143‑1 (MQ=255) tATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctc < 2:349914‑M1/143‑4 (MQ=255) aTGGTTTGATCTTGTCGAACCGTACGACGACGAGCGACTGCGCGTACAAGCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 2:678685‑M1/143‑5 (MQ=255) ggATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccgt > 2:221385‑M1/1‑137 (MQ=255) gATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttc > 2:434865‑M1/1‑136 (MQ=255) gATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttc < 2:812773‑M1/143‑8 (MQ=255) tGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttc < 1:205103‑M1/143‑11 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttc > 2:168802‑M1/1‑130 (MQ=255) cGGACGACGACGAGCAACAGCGCGGAGAAGCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc < 2:782516‑M1/143‑25 (MQ=255) cgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGCTTCTTTGAGGACGACGACGGCCTGCATcgccttcttcttcttcgaagccgcgcaaact > 1:816982‑M1/1‑112 (MQ=255) gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacg > 2:472391‑M1/1‑108 (MQ=255) cgcGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgc < 2:51992‑M1/142‑37 (MQ=255) cGACTGCGCGTACAATCTGAACTTGGCCAGAGGCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg < 2:616257‑M1/143‑39 (MQ=255) cgcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGCAACTGGAAGACATCGAAGCATCGGCACGTTGCTTTGAAGACGACGACGGCCCGCATctccgtcttctcctttgaagctgcgggggatcacccccgcgccg > 1:468726‑M1/1‑99 (MQ=255) ggcTGAACATGGCCAGCGCCGGGCAACCGGGCCGGAACTGGAAGACAGCGGAGCAGCGGGACGTTTCTGTTAAGACGACGACGGTCTGCAT‑‑‑‑‑CTCCTTCGTCTTCTTGGAAGATGCGGAAGAGCACGCCGGTAACTCCACtgtg < 1:837839/141‑1 (MQ=255) aTCTGAACTTGGCCAGAGCCGGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGACGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 2:423437‑M1/143‑53 (MQ=255) ttGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccaccgcggcatctac > 2:489349‑M1/1‑83 (MQ=255) ccTCGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgat < 2:484614‑M1/143‑71 (MQ=255) gCAACCCGGCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtc < 2:701340‑M1/143‑75 (MQ=255) gCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCCTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtc < 2:848790‑M1/143‑75 (MQ=255) aaCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgt < 2:821318‑M1/143‑77 (MQ=255) aCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccctccgtgctggtcgtc > 2:36349‑M1/1‑66 (MQ=255) cccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct > 2:413884‑M1/1‑65 (MQ=255) cgcccgGAACTGGAAGACATCGAAGCATCGGCACGCTTCCTTGAAGACGACGACGGCCTGCATctccctcttcttctttgaagatgcggaagaccacgccggcaactccactgtggcatttaccatcagtgatggtcgcctgt > 1:203454‑M1/1‑63 (MQ=255) cTGGAAGACATCGAAGCATCGGCACGTTTATTTGAATACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgc < 2:681732‑M1/143‑90 (MQ=255) ggcagacATCGAAGCATCGGCACGTTTCTTGGAAGACGACGACGGCCTGCATctccttcgtcttctttgaagatgcggaagatcacgccggtaacgccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt < 1:141136‑M1/140‑92 (MQ=255) cATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgt < 2:450894‑M1/143‑98 (MQ=255) cgtggggtcggcacgTTGCTTTGAAGCCGACGATGGCCTGCATctccttcttcttctttgaagatgcggaagagcacgccgttaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 1:297‑M1/136‑101 (MQ=255) gCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctacttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcagttacgctcggtgatgagcgtcggtttcctctgcgtgggcgtgacccgc > 1:301369‑M1/1‑39 (MQ=255) cGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgc > 2:13368‑M1/1‑35 (MQ=255) ggCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccacggtggcatttacgatctgtgatggtcggctgtttactctgcgtgagcgtgaactgcccgct > 2:746273‑M1/1‑34 (MQ=255) tttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgt < 2:257185‑M1/143‑120 (MQ=255) ttGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTCA‑GATAGGCGGTAGTTTTTCTGTTTACTCTGCGTGAGCGTGAACTGCGCGCTTCTCGTCTGtc > 2:199904/1‑142 (MQ=255) gAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatc < 2:816982‑M1/143‑123 (MQ=255) gAAGACGACGACGGCCTGCAGctccttcttcttctttgaagatgcggaagatcacgccggtaacgccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatc < 2:587506‑M1/143‑123 (MQ=255) cgacgacgGCCTGCATctccttcttcttcttcgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgcgcgtgaactccccccttctcgtctgtatcgtagg > 1:153663‑M1/1‑16 (MQ=255) gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtg < 1:472391‑M1/143‑132 (MQ=255) ccggCCTGCCTctccttcttcttctttgaagatgcggaagttcacgccggtaacgccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgc < 1:824473‑M1/142‑133 (MQ=255) tGCATctccttcttctgctttgaggaggcggaagatcccgccggttactcctctgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtag < 1:250412‑M1/143‑139 (MQ=255) | CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGC > NC_000913/4001501‑4001780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |