Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 4,001,644 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016431 (0.050)20 (0.940) 19/284 0.1 95.2% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001649 = 1 (0.050)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4001509‑4001643
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAT  >  NC_000913/4001649‑4001774
                                                                                                                                                                                                                                                                     
ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTGGACGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCATTCT                                                                                                                        >  1:60667/1‑143
   tATCTTGTCGACCCGACCGACTGCGTGCGCCTGCGCGTACAATCTCAACTTGGCCAGAGCCTGTCATCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGTCGACGACGGCCTGCATCTCCTTCTTCT                                                                                                                     <  2:350974/142‑1
                CGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGC                                                                                                        <  2:46276/143‑1
                 GGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGCCATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTCACGATGCG                                                                                                       >  1:194073/1‑143
                                  gGCGCGTACACTCGCAAGCTGGCCCGAGCCTGGCAACCCGCGCGGAACTAGAAGACGTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAA                                                                                      <  2:273041/142‑1
                                  TGCGCGTAGTGTGTGAGCTTGGCCAGAGCCTGGCAACCGGCCCGGAACTGGAAGACATCGAGGCGTCGGCACGTTTCTTTGAAGACGACGACGGCGTGCATCTCCTTGTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAA                                                                                      <  2:273131/143‑1
                                                 AACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATT                                                                       <  2:10708/143‑1
                                                       gccgcgGCCTGGCGTCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACCGCCTGCACCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCAT                                                                 <  2:294990/137‑1
                                                                      CCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTATTCATTAAAGATGAAGAAGAACACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCT                                                  >  1:289730/1‑143
                                                                         GCCCGCAACTTGAAGACATCGTAGCATCGGCACGTTTCTTTGAAGACGACTACGGCCTGCATTTCTTTTTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACCCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTT                                               <  1:174292/143‑1
                                                                                  TGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTCGAAGCTGCGGAAGATCACGCCGGCAACCCCACTGTGCCATCTACCATCCCGGATGCTCGTCTGTCTCCTCcccg                                      >  2:171291/1‑139
                                                                                          ATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCTGTGATTGTAAACTGTTTACTCTGCGTGAGCGTG                              >  1:5328/1‑143
                                                                                            CGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATCTTCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAA                            <  2:359505/143‑1
                                                                                                      GCACGTTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGACTGTATACTCTGAGAGAGCATGAACTACACGCat                  >  1:347562/1‑141
                                                                                                           TTTCTTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCGGGTAACCCCACGGTGGCGTTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGGTCTGCCCGCCGTTCGg             >  2:83226/1‑142
                                                                                                            TTCTGTGAAGGCGACGACGGCCTGCATGTCCTTCTTCTTCTTGGAAGATGCGGAAGAGCACGCCGGTAACTCCACTTGGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTC            <  2:351671/143‑1
                                                                                                               TTTGAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGCAGTCTGTTTACTCGCCGTGAGAGTGAACTGCCCGCGTCTCGCCTGT         >  2:316668/1‑143
                                                                                                                  GAAGACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGTCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATC      <  1:281678/143‑1
                                                                                                                     ggCGACGACGGCCTGCATTTCTTTGTTTTTCTTTGAAGATTCGGAAGATTACGCGGGTAACTCCACTGTGGGATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTA   <  1:158527/141‑1
                                                                                                                      ACGACGACGGCCTGCATCTCCTTCTTCTTCTTTGATGATGCGGAAGATCACTCTGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAT  <  1:235620/143‑1
                                                                                                                                                                                                                                                                     
ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4001509‑4001643
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAT  >  NC_000913/4001649‑4001774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.