| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.050) | 20 (0.940) | 19/284 | 0.1 | 95.2% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.050) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
TCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAT > NC_000913/4001514‑4001774 | attgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggcactggacgacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCattct > 1:60667‑M2/136‑143 (MQ=255) tatcttgtcgacccgaccgactgcgtgcgcctgcgcgtacaatctcaacttggccagagcctgtcatcccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagtcgacgacggcctgcatCTCcttcttct < 2:350974‑M2/11‑1 (MQ=255) cggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc < 2:46276‑M2/24‑1 (MQ=255) ggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagccatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTCACGATGCg > 1:194073‑M2/119‑143 (MQ=255) tgcgcgtagtgtgtgagcttggccagagcctggcaaccggcccggaactggaagacatcgaggcgtcggcacgtttctttgaagacgacgacggcgtgcatCTCCTTGTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa < 2:273131‑M2/42‑1 (MQ=255) ggcgcgtacactcgcaagctggcccgagcctggcaacccgcgcggaactagaagacgtcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa < 2:273041‑M2/42‑1 (MQ=255) aacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAtt < 2:10708‑M2/57‑1 (MQ=255) gccgcggcctggcgtcccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgaccgcctgcacCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCAt < 2:294990‑M2/63‑1 (MQ=255) cccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTATTCATTAAAGATGAAGAAGAACACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCt > 1:289730‑M2/66‑143 (MQ=255) gcccgcaacttgaagacatcgtagcatcggcacgtttctttgaagacgactacggcctgcatTTCTTTTTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACCCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt < 1:174292‑M2/81‑1 (MQ=255) tggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTCGAAGCTGCGGAAGATCACGCCGGCAACCCCACTGTGCCATCTACCATCCCGGATGCTCGTctgtctcctccccg > 2:171291‑M2/54‑139 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCTGTGATTGTAAACTGTTTACTCTgcgtgagcgtg > 1:5328‑M2/46‑143 (MQ=255) cgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTTCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 2:359505‑M2/100‑1 (MQ=255) cGTTTCTTTGAAGGAGACGACGCCCTGC‑‑‑‑‑CTCTCCTTCTTCTTCTTTGACGATGCGGAAGATCACGCCGGTAACTCCTCTGTGGTATTTACCATCCGTGATGGTCGTCTGTTTTCTCTGCGTGAGCGTGTACTGCCCGCTTTTc < 2:280092/143‑1 (MQ=255) gcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGACTGTATACTCTGAGAGAGCATGAACTACAcgcat > 1:347562‑M2/34‑141 (MQ=255) tttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCGGGTAACCCCACGGTGGCGTTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGGTCTGCCCGCCGTTcgg > 2:83226‑M2/29‑142 (MQ=255) ttctgtgaaggcgacgacggcctgcatGTCCTTCTTCTTCTTGGAAGATGCGGAAGAGCACGCCGGTAACTCCACTTGGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTc < 2:351671‑M2/116‑1 (MQ=255) tttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGCAGTCTGTTTACTCGCCGTGAGAGTGAACTGCCCGCGTCTCGCCTGt > 2:316668‑M2/25‑143 (MQ=255) gaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGTCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATc < 1:281678‑M2/122‑1 (MQ=255) ggcgacgacggcctgcatTTCTTTGTTTTTCTTTGAAGATTCGGAAGATTACGCGGGTAACTCCACTGTGGGATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTa < 1:158527‑M2/125‑1 (MQ=255) acgacgacggcctgcatCTCCTTCTTCTTCTTTGATGATGCGGAAGATCACTCTGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAt < 1:235620‑M2/126‑1 (MQ=255) | TCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAT > NC_000913/4001514‑4001774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |