| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 417,075 | (TCATAAATCTG)2→1 | intergenic (‑123/‑57) | sbcD ← / → phoB | exonuclease, dsDNA, ATP‑dependent/response regulator in two‑component regulatory system with PhoR |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 417075 | 417085 | 11 | 50 [0] | [0] 50 | sbcD/phoB | exonuclease, dsDNA, ATP‑dependent/response regulator in two‑component regulatory system with PhoR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 417074 | 0 (0.000) | 48 (1.050) | 42/260 | 0.1 | 100% | intergenic (‑122/‑68) | sbcD/phoB | exonuclease, dsDNA, ATP‑dependent/response regulator in two‑component regulatory system with PhoR |
| ? | NC_000913 | 417086 = | 0 (0.000) | intergenic (‑134/‑56) | sbcD/phoB | exonuclease, dsDNA, ATP‑dependent/response regulator in two‑component regulatory system with PhoR | |||||
CCAGTCTGAGGTGTGAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/416926‑417074‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcataaatctgACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCGCGAAATGGTCTGCTTCGTGCTCGAACAAAATGGCTTTCAGC > NC_000913/417086‑417226 CCAGTCTGAGGTGTGAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGCGCGACGAGCTTTTCATA > 2:578681/1‑143 CAGTCTGAGGTGTGAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAA > 2:591400/1‑143 AGTCTGAGGTGTGAAGGATGCGCATAACGGTTCCCTGGCGAAACAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGACCTTTTCATAAA > 1:89185/1‑143 GTCTGAGGTGTGAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCAACGGAAAGCAATAACCTGGAGATATGTGCGACGAGCCGTGCATAAAg > 1:498952/1‑142 GAGGTGTGAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGA < 1:253436/143‑1 GTGAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCAT > 1:131306/1‑143 GAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCAATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATATGCGACGAGCTTTTCATAAATCTGACGCGTAA > 1:282943/1‑143 GAAGGATGCGCATAACGGTTCCCTGGCGAAAAAACATGGCCGCGATTATACCCAAACAGATGTGCAATTTGCTTTTTTCTGCGCCCCGGAAATCAATAACCTGAAGATATCTGCGACGAGCTGATCATAAATCTGCCGAATAA > 1:240593/1‑143 AAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAAc > 2:621019/1‑142 GATGCTCATAACGGTTTCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAAGCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGAC < 2:247330/143‑1 CGCATAACGGTTCCCTGGCGAAGAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATGTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATACGTGCGACGAGATTTTCAGAAATCTGACGCATAATGACGTgg > 1:536653/1‑141 GCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGGAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGGCGCATAATGACGTCGC > 2:830615/1‑143 GCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGC < 1:451932/143‑1 ATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCAT > 1:193809/1‑143 GTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGA < 2:38226/143‑1 TTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGTCTTTTGAAGGCAACTACGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGAT < 2:196213/143‑1 ttCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATC < 1:310367/141‑1 tccgggggGAAAAAGCATGGGCGCGACTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATC < 2:317464/135‑1 TCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATC < 2:625839/143‑1 CTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGCTGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGCAGCTATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTAGCATCAATCATgtca > 1:555577/1‑139 TGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGCGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGAAA > 2:233943/1‑143 GCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACC < 1:845305/143‑1 CGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGAACGCGACCT > 1:457230/1‑143 AAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTA < 1:591400/143‑1 GGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTAGTTATTACAAC > 2:534779/1‑143 GCGCGCTTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACA < 2:805771/143‑1 GCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTGCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACA < 2:565480/143‑1 GCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTGCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACA > 1:561346/1‑143 cttTTATACTCATACAGATGTTCCATTTGCTTTTTTCTGCGCCACGTAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTTACGTATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGG < 1:34243/140‑1 TACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATC < 2:170320/143‑1 CCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCAT < 2:452515/143‑1 CCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATG < 2:650813/143‑1 AACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCG > 2:860771/1‑143 AACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGAGATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCACCCTATTTCTTACAACCGGGCGAATCATGGCG > 2:39700/1‑143 TGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTAT > 1:155647/1‑143 CCATTTGCTTGTTTCTGCGCCACGGAAATCAATAACCTGAATATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTC < 1:578681/143‑1 TTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCGATTTATTACAACAGGGCAAATCATGGCGAGACGGCTTCTcggccga > 1:2483/1‑136 GAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAA < 1:534779/143‑1 ATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTC > 2:395587/1‑143 TCACTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACATCAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCG < 2:384729/143‑1 TCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCG > 2:805127/1‑143 CAATACCCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCGC < 2:334014/143‑1 AATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCGCG > 1:658199/1‑143 ATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTAGTAGAAGATGAAGCACCAATTCGCGA > 1:49681/1‑143 TGAAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCGCGAAATGGT < 2:491608/143‑1 AAGATATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTTGCGAAATGGTCT > 1:566798/1‑143 TATGTGCGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTGGAAGATGAAGCTCCAATTCGCGAAATGGTCTGCTT < 1:474649/143‑1 TGCGACGAGCTTTTCGTCAAGCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACACCAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCGCGAAATGGTCTGCTTCGTG < 2:595024/143‑1 CGACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCGCGAAATGGTCGGCTCCGTGCT > 1:855504/1‑143 GACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAACTCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGATCCAATTCGCAAAATGGTCTGCTGCGTGCac > 1:484603/1‑141 GACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTGTTCTGGTCGTAGAAGATGAAGCTCCAATTCACGAAATAATCTACTTCGTGCTC > 2:245005/1‑143 ACGAGCTTTTCATAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCTAATTCGCGAAATGGTCTGCTTCGTGGTCG > 2:761978/1‑143 TAAATCTGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGAGGTATTCTTGTCGTAGAAGATGAAGCTCCAATGCGCGAAATGGTCTGCTTCGTGCTAGGACAAAATGGCT > 1:196089/1‑143 TGACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCGCGAAATGGTCTGCTTCGTGCTCGAACAAAATGGCTTTCAGC < 1:860771/143‑1 CCAGTCTGAGGTGTGAAGGATGCGCATAACGGTTCCCTGGCGAAAAAGCATGGGCGCGATTATACCCAAACAGATGTGCCATTTGCTTTTTTCTGCGCCACGGAAATCAATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/416926‑417074‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcataaatctgACGCATAATGACGTCGCATTAATGATCGCAACCTATTTATTACAACAGGGCAAATCATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCGCGAAATGGTCTGCTTCGTGCTCGAACAAAATGGCTTTCAGC > NC_000913/417086‑417226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |