New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 23758333 (0.060)49 (1.020) 41/274 0.1 94.4% coding (128/963 nt) menC O‑succinylbenzoyl‑CoA synthase
?NC_000913 2514275 = NA (NA)intergenic (+33/‑54) nupC/insL1 nucleoside (except guanosine) transporter/IS186 transposase

GCCTGAATGAAGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCC  >  NC_000913/2514133‑2514412
                                                                                                                                               |                                                                                                                                           
gCCTGAATGAAGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTGTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCATTCGCTGCACTGTTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCa                                                                                                                                             <  2:182912/143‑1 (MQ=255)
  cTGAATGAAGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATa                                                                                                                                           >  2:836691/1‑143 (MQ=255)
      atgaaGGGCAAGGTAACGTGGGTTCTCGCTGCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAgcg                                                                                                                                       <  1:302933/143‑1 (MQ=255)
         aaGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTCCGTGTGTGAGTGAGATGTCAGCGTCAATCGCAGCACTGGTGCTGTAAGACCCTACATAAAAAAGCCGGGGATAATCCCCATAAGAGCTa                                                                                                                                    >  1:612891/1‑143 (MQ=255)
          agagCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTaa                                                                                                                                   <  2:558184/143‑1 (MQ=255)
              cAAGGTAACGTGGTTTCTCGCTTCGGTCTGAGGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCCATCGCAGCACTGGTGGTGAAACACCAGACATAAAAAAGCCGGGGATCATTCCCATAAGCGCGGACTTa                                                                                                                               >  2:161407/1‑143 (MQ=255)
               aaGGTAGCGTGGTTTCTGGCTTTGGTCTGAGGCTGGTTTGCGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTTAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTaa                                                                                                                              <  1:206199/143‑1 (MQ=255)
               aaGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTaa                                                                                                                              <  2:788067/143‑1 (MQ=255)
               aaGGTAACGTGGTTGCTCGCTTCGGTCTGAAGCTGGTTGACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTaa                                                                                                                              <  2:492589/143‑1 (MQ=255)
                aGGTAACGGGGTTTCGCGCTTCGGTCTGAAGCTGGGTTACGGAGCTGCCCTGGTGAGTGAGCTGTCTGCGTCAATCGCAGCACTGGTGCGGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAg                                                                                                                             <  2:106128/143‑1 (MQ=255)
                      cggggTTTCTCGCTTCGTTCTTAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCAGTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTtgt                                                                                                                       <  2:801019/140‑1 (MQ=255)
                       gTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGGGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACtcacggtgcgtg                                                                                                                      >  1:600491/1‑132 (MQ=255)
                        tGGTTTCTGGCTTCGGTCTGAAGACGGTTTGCGGCTCTACCCTGGTGCGTGTGCCGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTgg                                                                                                                     <  1:328628/143‑1 (MQ=255)
                        tGGTTTCTCGCCTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTgg                                                                                                                     <  2:224162/143‑1 (MQ=255)
                           tttCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTCAGGGGTGTGGTAt                                                                                                                  >  2:839559/1‑143 (MQ=255)
                              ctcGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCCATCGCAGCACTCGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTCAGGGTTGTGGTAGTAc                                                                                                               >  2:144200/1‑143 (MQ=255)
                                           gAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCCGCACTGGTGCTGGAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAAAGTAAGGGTTGTGGTGTTCCGCCTGATATgcgt                                                                                                  >  1:823779/1‑140 (MQ=255)
                                               cTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAAc                                                                                              >  2:578061/1‑143 (MQ=255)
                                                     tACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCg                                                                                        >  1:236699/1‑143 (MQ=255)
                                                            ctACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCGATAAGCGCTACCTTAAGGGTTGGGGTATTACACATGATATGATTTAACGTGCCGATGAAtc                                                                                 >  1:161728/1‑142 (MQ=37)
                                                              aCCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAACGCCGGGTATAATTCTCATAAGCTCTAACGTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTAc                                                                               <  2:631801/143‑1 (MQ=37)
                                                                       gAGTGTGGTGGCTGCGGCAAGAGCGGCACGGGGGCTGTAAGACCATACATAAAGAAGCCGGGGATAATTCGCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGa                                                                       <  1:126411/143‑1 (MQ=18)
                                                                         gtgtGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATa                                                                     >  1:773041/1‑143 (MQ=255)
                                                                          tgtgCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGGTATGATTTAACGTGCCGGTGAATTACTGTCACGATaa                                                                    >  1:59659/1‑143 (MQ=255)
                                                                           gtgCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAc                                                                   <  2:68018/143‑1 (MQ=255)
                                                                               tGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTGAAGATGACgg‑‑gc                                                             >  1:285/1‑142 (MQ=255)
                                                                               tGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCCCGATAACTG‑‑Gt                                                             >  2:811379/1‑143 (MQ=255)
                                                                                 tCTGCGTCAATCGCAGCACTGGTGCTGTACGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCa                                                           >  2:661490/1‑143 (MQ=255)
                                                                                 tCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAACAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCa                                                           <  2:77807/143‑1 (MQ=255)
                                                                                 tCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCa                                                           <  2:675561/143‑1 (MQ=255)
                                                                                    gCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTTGCGATGAATTACTATCACGATAAATG‑‑CTCAGcg                                                        >  1:811850/1‑142 (MQ=21)
                                                                                        ccaTCGCAGCACTGGTGCTGTCAGACTATGCAGAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGTGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTc                                                    <  1:176914/141‑1 (MQ=18)
                                                                                          aTCGCTGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTg                                                  >  1:716236/1‑143 (MQ=255)
                                                                                           tCGCACAACTGGTGGTGCAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGGCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTgg                                                 <  2:367879/143‑1 (MQ=17)
                                                                                           ccGCATCACTGGTGCTGTAAGAACATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTTGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTgg                                                 <  1:432957/142‑1 (MQ=255)
                                                                                           ccGCAGCACCGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTgg                                                 <  2:479188/142‑1 (MQ=255)
                                                                                             gcagcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTATGGcc                                               >  1:67626/1‑143 (MQ=255)
                                                                                               agcaCTGGTGGTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCa                                             <  2:760980/143‑1 (MQ=255)
                                                                                                 caCTGGTGCTGGAAGACCATACATAATAGAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCata                                           <  1:296168/143‑1 (MQ=255)
                                                                                                    tgttGCTGTCAGACCATACATAAAAACGCCGGGGATCATTCCCTTAAGCGTTAACTTAATGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTg                                        <  1:760198/140‑1 (MQ=14)
                                                                                                    tGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATCCTGGACCgtagta                                        >  1:294369/1‑140 (MQ=255)
                                                                                                      gcgCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGt                                      <  1:145085/141‑1 (MQ=255)
                                                                                                      gTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCTGTATTGGt                                      >  2:3282/1‑143 (MQ=255)
                                                                                                           gTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATGACTCTCACGATAACTG‑‑GTCAGCAAGTCTGGCCCATATTGGGaaagc                                 >  1:347617/1‑140 (MQ=255)
                                                                                                            tAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGccc                                >  2:105249/1‑143 (MQ=255)
                                                                                                               gACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCgaa                             <  2:236699/143‑1 (MQ=255)
                                                                                                               gACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTGAAGGGATGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑ATCAGCAATTCTGGCCCATATTGGTAAGACCgaa                             >  1:329713/1‑143 (MQ=255)
                                                                                                                aCCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCgaag                            >  2:140307/1‑143 (MQ=255)
                                                                                                                     ccataAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTg                       <  1:594426/142‑1 (MQ=255)
                                                                                                                       ataAAAAAGCCGGGGACAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGa                     <  2:268879/143‑1 (MQ=255)
                                                                                                                         aaaaaaGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATa                   >  2:553106/1‑143 (MQ=255)
                                                                                                                              aGCCGAGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATACGATTTAACGTGGCGATGAATTACTCTAACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCg              <  2:363279/143‑1 (MQ=255)
                                                                                                                               gCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCgg             <  2:600491/143‑1 (MQ=35)
                                                                                                                                 cGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGACCGAAGAACTGGCTACTTCgtcg           >  2:71532/1‑140 (MQ=255)
                                                                                                                                  ggggATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCAGACGGACTGGATAGTGCGGCAc          >  1:201029/1‑143 (MQ=11)
                                                                                                                                  agggATAAATCCGATAAGGGCTAACATAAGGGTGGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCAc          <  2:665585/142‑1 (MQ=11)
                                                                                                                                    ggATAATTCCCATACGCGCTAACTTAAGGGTTGTGGTACTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGt        <  2:285/143‑1 (MQ=21)
                                                                                                                                    ggATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGt        <  2:773041/143‑1 (MQ=34)
                                                                                                                                          ttCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGcc  >  2:741218/1‑143 (MQ=11)
                                                                                                                                          ttCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGcc  >  1:581821/1‑143 (MQ=11)
                                                                                                                                          ttCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTATCGATAACTGCCATCAGCATTGC‑‑GCCCCCATTTGTAAGCCCGCCGACCTGGATCCTTCCGCACGTAACGcc  >  1:611834/1‑143 (MQ=2)
                                                                                                                                               |                                                                                                                                           
GCCTGAATGAAGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTG‑‑GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCC  >  NC_000913/2514133‑2514412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.