| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.020) | 50 (0.970) | 44/284 | 0.1 | 98.0% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAT > NC_000913/4001509‑4001769 | aTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCGGCATctccgtgt > 1:341304‑M1/1‑135 (MQ=255) aTCTTGTCGAACCGGACGACGACGAGCGACGGAGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTGCTTTGCAGACGGCGACGGCCTGCATctcctgcgcctt > 2:473309‑M1/1‑131 (MQ=255) cTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCGCGGCACTGGAAGCCATCGAAGCATCGGCACGTTTCTTTGCAGACGACGACGGCCTGCATctccttcttcttct > 1:600126‑M1/1‑129 (MQ=255) tCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga < 1:627497‑M1/143‑19 (MQ=255) cGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCATGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 1:757827‑M1/143‑20 (MQ=255) cGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc < 1:817438‑M1/143‑25 (MQ=255) cGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc < 1:421015‑M1/143‑25 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGCCGGCCTGCATctccttcttcttctttgaagatgcggaagatc > 1:825045‑M1/1‑111 (MQ=255) cgaGCGACTGCGCGTACAAGCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcac < 1:642697‑M1/143‑35 (MQ=255) gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGACCTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaggatcacgca > 1:275363‑M1/1‑106 (MQ=255) cGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg > 2:488122‑M1/1‑105 (MQ=255) aCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggcagatcacgccggt > 2:789311‑M1/1‑103 (MQ=255) aCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggt > 1:240836‑M1/1‑103 (MQ=255) tGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTGTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtag > 2:130419‑M1/1‑101 (MQ=255) cgcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCAAGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgacgatgcggaagatcacgccggtcacc > 1:272193‑M1/1‑99 (MQ=255) gggtaCAATCTGAGCGTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCAGGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactc < 2:734731‑M1/141‑46 (MQ=255) gcgTCCAATCAGCACTCGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctgcttctttgaagatgcggaagatcacgccggtaactc < 1:770905‑M1/143‑46 (MQ=255) tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTATCTTTGAAGACGACGACCGCCTGCATctccttcttcttctttgaaaatgcgggagatcacgccgatagctctac > 2:737959‑M1/1‑95 (MQ=255) aaTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGAACGGTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt > 1:258179‑M1/1‑92 (MQ=255) aTCTGAACTTGGCCAGCGCATCGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 2:829926‑M1/143‑53 (MQ=255) aTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg > 1:621054‑M1/1‑91 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgg < 2:195689‑M1/143‑54 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgg < 1:126351‑M1/143‑54 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccaccgtgg > 1:578875‑M1/1‑90 (MQ=255) tCTGAACGTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgg < 1:128218‑M1/143‑54 (MQ=255) tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTACTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtcactccactgtggca > 1:390117‑M1/1‑88 (MQ=255) gAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACCACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcat < 1:441019‑M1/143‑57 (MQ=255) cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcc > 1:718156‑M1/1‑78 (MQ=255) gCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctgcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga < 2:33776‑M1/143‑70 (MQ=255) ccTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCATCTTTCTTTGTAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgat < 2:188024‑M1/143‑71 (MQ=255) cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg < 1:513726‑M1/143‑72 (MQ=255) tGGCATCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgcggg > 2:326543‑M1/1‑71 (MQ=255) ggCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgcagatgcggaagatcacgccggtaactccactgtggcatttcccatcactgatgca > 2:31361‑M1/1‑70 (MQ=255) ccgcccgGAACTGGAAGACATCGAAGCATCGACACGTTTCTTTGAAGACGACGCCGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggcaaccacaatgtggcatttaccatccgtgatggtcgtatg > 1:853267‑M1/1‑64 (MQ=255) ccgGATCTGGAAGACCTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta < 1:303006‑M1/143‑84 (MQ=255) cgGGACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttac < 1:555826‑M1/143‑85 (MQ=255) aCTGGAAGACATCGGTGCATCGGCACGTTTCTGTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgcgggtaactccactgtggcacttaccatccgtgatggtcgtctgtttactctg < 2:474627‑M1/143‑89 (MQ=255) gtgGAAGACATCGAAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgc < 1:824241‑M1/142‑90 (MQ=255) gcaagaCATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt < 1:635586‑M1/141‑92 (MQ=255) gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgcagatgcggaagctcacgccggtgactccactgtggcatttagcagccgtgatggtcgtcggtttactctgcgcg > 1:296441‑M1/1‑51 (MQ=255) gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtacctccactgtgtcatttcccatccgtgatggtcgtctgtttactgtgcgtg > 1:588684‑M1/1‑51 (MQ=255) cagcgaaGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgt < 1:460223‑M1/140‑98 (MQ=255) aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtg > 1:490355‑M1/1‑45 (MQ=255) aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGACCTGCAT‑‑‑‑‑CTCCATCTTCTACTTTGAACATCCGAACCCTCACGCCAGTAACGCCCCTCTGCTACTTACAATCCGTAGTGGTCGCGTGTTCACCCTcagtgagcgtg > 2:317306/1‑143 (MQ=255) cgacgtatcgggaGGTTTCTTTGACGACGGCGACGGCCTGCATcgcctgcttcttcttggaagatgcggaagatcacgccggtaactccactgtggcagttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 2:349218‑M1/137‑101 (MQ=255) gTTTCTTTGAAGGCGGCGACGGCCTGCATctccttcttcttctttgaagatgcggaagagcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcg < 2:560606‑M1/143‑115 (MQ=255) gTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttggaagatgcggaagatcacgccggtaactccactgtggcctttaccatccgtgatggtcgtcggtgtactctgcgtgcgcgtgaacgcgccgcttgtgc > 2:702249‑M1/1‑29 (MQ=255) tgtcgtggaagacgaCGACGGCATGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt < 1:279957‑M1/136‑116 (MQ=255) tttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgggaactgcccgcttgtcgcctgt > 2:668712‑M1/1‑24 (MQ=255) aaGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtggtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcg > 1:733065‑M1/1‑20 (MQ=255) tcgacgacgcTCTGCATgttcgtcttcttctttgtagatgcggcagatcacgccggtaattccactgtggcatttaccatccgtgatggtcgtctgtttattctgtgtgtgcgtgaactgcccgcttttcgtctgtatcgtat < 2:550741‑M1/142‑127 (MQ=255) | ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAT > NC_000913/4001509‑4001769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |