New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1113417 =	NA (NA)	4 (0.090) +GATTTTGCGTTTGTCATCAGACTT	4/234	6.5	NA	noncoding (1/98 nt)	RIP97 (repetitive extragenic palindromic) element, contains 2 REP sequences and 1 IHF site	RIP97 (repetitive extragenic palindromic) element, contains 2 REP sequences and 1 IHF site
	?	NC_000913	= 4470517	NA (NA)					intergenic (+195/+11)	mgtA/ridA	magnesium transporter/enamine/imine deaminase, reaction intermediate detoxification
Rejected: Coverage evenness skew score above cutoff.

CGGTGACGATGGCCCGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTA  >  NC_000913/1113276‑1113555                                                                                                                                              |                                                                                                                                           cGGTGACGATGGCCCGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGGTAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGc                                                                                                                                           <  1:797560/143‑1 (MQ=255)   gTGACGATTGCCCGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCt                                                                                                                                         <  2:635992/143‑1 (MQ=255)     gACGATGGCCCGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCGTTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGa                                                                                                                                       >  1:677656/1‑143 (MQ=255)      acgctcgCCGGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGAt                                                                                                                                      <  1:245701/137‑1 (MQ=255)      aCGATGGCCCGTCTGCATTTCCGTGTCTGGAATGCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGAt                                                                                                                                      <  1:169529/143‑1 (MQ=255)       cGATGGCCCGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGGTATTACGAAGGGATACAGCTCAATCCACTGGCACTGCGTAAGCCGGATGCGGCTTCGCGAGCAAAACGTAGTTGCCTGAtt                                                                                                                                     >  1:299209/1‑142 (MQ=255)         aTGGCCCGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTACACCGGATGCGGCTTCGCAATAAAAACGTAGTTACCCGATccg                                                                                                                                   >  2:94810/1‑143 (MQ=255)            gcgcGTCTGCATTTCCGGGGCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTGTTACGAAGGGATGAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTa                                                                                                                                <  2:907749/140‑1 (MQ=255)            gCCCGTCTGCATTGCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTa                                                                                                                                <  1:525257/143‑1 (MQ=255)              ccGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGCGTTATTACGAAGGGATCAAGCTCAATCCACTGGCATTGCGTAACCCGGATGCGGCTTCGCAATAAAAACGTCGTTGCCTGATGCGCTACg                                                                                                                              >  1:389344/1‑143 (MQ=255)              ccGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACg                                                                                                                              >  1:894439/1‑143 (MQ=255)                   tGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTAt                                                                                                                         <  1:493464/143‑1 (MQ=255)                    gCATTTCCGTGTCTGGACTTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATc                                                                                                                        <  1:417176/143‑1 (MQ=255)                      aTTTCCTCGTCTGGAACTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAg                                                                                                                      <  1:75583/143‑1 (MQ=255)                      aTTTCCGTGTCTGGAATTCCCCGGAGAGGTATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATGCACTGGCATCGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAg                                                                                                                      >  1:456563/1‑143 (MQ=255)                      aTTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGGAGGGAGAAAGCTCAATCCACTGGCATTGCGTAAACCGGCTGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAg                                                                                                                      >  1:422465/1‑143 (MQ=255)                      aTTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAg                                                                                                                      >  1:894144/1‑143 (MQ=255)                       tttCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAACACGTAGTTGCCTGATGCGCTACGGTTacaagg                                                                                                                     >  2:628261/1‑138 (MQ=255)                           cGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGGGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                                                 <  2:314709/143‑1 (MQ=255)                               tCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAGGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATc                                                                                                             >  1:485311/1‑143 (MQ=255)                               tCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATc                                                                                                             >  2:26712/1‑143 (MQ=255)                               tCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATc                                                                                                             >  1:274161/1‑143 (MQ=255)                               gcaggAATGCCCCGGAGAGATATGCTTCATGGGTGAGTTAGTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATc                                                                                                             <  1:150296/140‑1 (MQ=255)                                 tGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGt                                                                                                           >  1:400972/1‑143 (MQ=255)                                  ggAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGACGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGCTGCGCTACGCTTCTCAGGCCTACATCCtt                                                                                                          >  2:215413/1‑143 (MQ=255)                                   gAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTc                                                                                                         >  1:770588/1‑143 (MQ=255)                                   gAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTc                                                                                                         >  1:767683/1‑143 (MQ=255)                                         cccGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATCAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCac                                                                                                   >  2:389954/1‑142 (MQ=255)                                           cGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAAtt                                                                                                 >  1:454266/1‑143 (MQ=255)                                                  atatTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGAt                                                                                          >  2:626165/1‑143 (MQ=255)                                                   tatTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGAtt                                                                                         <  1:474052/143‑1 (MQ=255)                                                     ttcttcATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTTGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGAtttt                                                                                       <  1:296312/143‑1 (MQ=255)                                                     ttcttcATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTTCGCTTAGCAGGCCTACATCGTTCCTGCAATTTATTGAtttt                                                                                       <  2:665257/143‑1 (MQ=255)                                                     ttcttcATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGAtttt                                                                                       <  1:777533/143‑1 (MQ=255)                                                     ttcttcATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCGTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGAgttt                                                                                       >  1:288952/1‑143 (MQ=255)                                                        ttcATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCa                                                                                    >  1:606148/1‑143 (MQ=255)                                                         tcATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGAttttccca                                                                                   >  1:308422/1‑139 (MQ=255)                                                         tcATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCaa                                                                                   >  1:480836/1‑143 (MQ=255)                                                                tGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTCTTGATTTAGCTAGACTTtg                                                                            >  1:341431/1‑143 (MQ=255)                                                                tGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTtg                                                                            >  1:221792/1‑143 (MQ=255)                                                                tGAGTTATTACGAAGGGATAAAACTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGAACTAAAAAAGAAGTTGCCTGATGCGCTACGCTCATCACGCATACAACGTTCCTGCAAGTTATTGCTTTTGCAAGAcactg                                                                            >  2:11989/1‑139 (MQ=255)                                                                 gAGTTTTTACGAAGGGATAACGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAACCGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCTATTTATTGATTTTGCAAGACTTtgt                                                                           <  2:18903/143‑1 (MQ=255)                                                                      attaCGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGCATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAAGTTATTGATTTTGCAAGACTCTGTGGGTc                                                                      >  2:747675/1‑143 (MQ=255)                                                                       ttaCGAAGGGATAAAGCTCAATACACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAAGTTATTGATTTTGCAAGACTTTGTGGGTCg                                                                     <  2:377413/143‑1 (MQ=255)                                                                           gAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCGTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAAGTTATTGATTATGCAAGACTATGAGGGTCGGaga                                                                 >  2:579780/1‑141 (MQ=39)                                                                             aGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCACGGCTTTGTGGGTCGGATAAg                                                               >  2:779528/1‑143 (MQ=255)                                                                                gATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACATAGTGAGTCGGATAAAGCg                                                            >  1:454288/1‑143 (MQ=255)                                                                                 aTAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGt                                                           <  2:454266/143‑1 (MQ=255)                                                                                      gCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGGTAAGGCGTTCAcg                                                      >  1:270762/1‑143 (MQ=255)                                                                                        tCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTCCCcgcc                                                    >  1:673433/1‑143 (MQ=255)                                                                                              catttgttttgtctAAACTGGATGCGGTTTCGCAATAAAAACGTAGGAGCCGGAGGCGCTACGCGTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATcc                                              <  1:27517/130‑1 (MQ=25)                                                                                                cTGTCATTGCGTAAACCGGATGCGGCTTCGCAACACAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCgg                                            <  1:631917/143‑1 (MQ=255)                                                                                                cTGGCATTGCGTAAACCGGATGCGCCTTCGCAATAAAAACGTACTTGCCTGACGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCgg                                            <  1:364936/143‑1 (MQ=255)                                                                                                   gCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTCATTGAGTTTGCAACACTTTGAGGGTCGGATAACGCGTTCACGCCGCCTCCGGCac                                         >  1:833360/1‑142 (MQ=37)                                                                                                      ttGCGTAAACCGGATGCGGCTTCGCAAAAAATGAAGATTTTCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCaaaaa                                      <  1:879890/143‑1 (MQ=25)                                                                                                         cGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAaacaa                                   <  2:140951/143‑1 (MQ=255)                                                                                                          gTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAaacaac                                  <  2:304482/143‑1 (MQ=255)                                                                                                          gTAAACCGGATGCGGCTTAGCACGAAAGACGGAGTTGCCTGATGCTCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAaacaac                                  <  1:830875/143‑1 (MQ=25)                                                                                                              aCCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGc                              <  2:868431/143‑1 (MQ=255)                                                                                                                 ggATGCGGCTTCGCAATAACAACGTAGTTGCCTGATGCGCTACGCTTCTCAGTCCTACATCGTTCTTTCAATTTTTTTATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCaa                           <  1:475906/143‑1 (MQ=37)                                                                                                                          ttCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATaacacaac                  >  2:100489/1‑137 (MQ=255)                                                                                                                          ttCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATAc                  >  1:799290/1‑143 (MQ=255)                                                                                                                          ttCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTCCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCCTCCTGCAAAAACCACGAGCCAATcaaactcc                  >  1:738137/1‑139 (MQ=25)                                                                                                                             gCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGTGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCgg               <  2:274161/143‑1 (MQ=255)                                                                                                                                  aaaaaCGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATAGCGGCGTTa          >  2:2293/1‑143 (MQ=255)                                                                                                                                         tAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGt   >  1:653209/1‑143 (MQ=255)                                                                                                                                          aGTTGCCTGACGCCCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCATAACGCCGGTa  <  1:140743/143‑1 (MQ=25)                                                                                                                                              |                                                                                                                                           CGGTGACGATGGCCCGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAGCCAATAAAAATACCGGCGTTATGCCGGTA  >  NC_000913/1113276‑1113555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.