New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =8 (0.150)40 (0.850) 31/250 0.5 79.1% coding (290/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 1209619 = 14 (0.300)pseudogene (1/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

GTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCC  >  NC_000913/1207648‑1207932
                                                                                                                                                |                                                                                                                                              
gtggtgGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAATTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAGACGGCTCTCGAGAACCT                                                                                                                                                >  1:133828‑M1/1‑143 (MQ=255)
   tgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatgcgcgtacatagccaatcagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgtt                                                                                                                                               <  1:930426‑M1/2‑1 (MQ=255)
     cacagtccagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaatgcacatattaactccccctttcaacagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTgg                                                                                                                                             >  2:111539‑M1/140‑143 (MQ=255)
         gCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCACATCGGATGGCGCTGTGCAAACGGCTCTCGAAAACCTCGGTTAGGG                                                                                                                                       >  2:53942‑M1/1‑143 (MQ=255)
         gCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAGCAGCTTGGTTTGGG                                                                                                                                       >  1:517659‑M1/1‑143 (MQ=255)
          ttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                        <  1:741280‑M1/9‑1 (MQ=255)
          ggcagtgcatggcgttgtatatgtgtgttgtggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagtaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                        >  2:746606‑M1/135‑143 (MQ=255)
          cagccggtGCCAGCCGGGAGAAGGGGCGGCACGACGCGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATACCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA                                                                                                                                      <  1:160905‑M1/140‑1 (MQ=255)
            tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCCA‑‑GAATCCGTTTGGCGATATCAAATAGGATAGCTCTGTGCAAACGGCTCTCGAGAACGTTGGTTTGGGAGA                                                                                                                                    >  1:388061‑M1/1‑143 (MQ=255)
            tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGCAAACCTTGGTTTGGGAGA                                                                                                                                    >  1:392651‑M1/1‑143 (MQ=255)
            tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGGGCAAACGGCTCTCGAAAGCCCTGGTGTGGGAGA                                                                                                                                    >  1:392197‑M1/1‑143 (MQ=255)
            tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAATAACCTACCGCACTTCGCGCGCTGCGGTTAAGCCGCAA‑‑GAATCCGCGTGGCGATATCAAATCGGATGGCCATGTGCAAACGGCGCTCGAAGACCTTGGTGTGGGAGc                                                                                                                                    >  2:665525‑M1/1‑142 (MQ=255)
            cagcgcattacgttgtagatctgtgttctggtcatttgtttatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGga                                                                                                                                      >  2:728244‑M1/133‑143 (MQ=255)
                  attacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGa                                                                                                                                >  1:79733‑M1/127‑143 (MQ=255)
                    ccgccTGTAGACGCGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTATGCCGCAA‑‑GAATCCGTTGGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctg                                                                                                                            <  2:50785‑M1/141‑6 (MQ=255)
                      gCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTACGGCGCAA‑‑GAATCCGTTTGGCGATATCTAATCGGATGGCTCTGTGCAAACGGCTCGCGCAACCCTTGCTTTGGGCGAAGGctctgcc                                                                                                                          >  2:461418‑M1/1‑136 (MQ=255)
                           gagaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacc                                                                                                                     >  1:789401‑M1/1‑131 (MQ=255)
                             gatttctgtgctggttatgtgttgatacgcgtacatagccaataagcatgttaaagccccctggtaaaagcaggaaggaggccatgtgcgggttatttcttcatgttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                     >  1:139907‑M1/116‑143 (MQ=255)
                              atctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGCGCAAAACTAAAt                                                                                                                    <  2:10561‑M1/29‑1 (MQ=255)
                              aaGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTGGGTTTGGGAGCAGGctctggcttacctat                                                                                                                  >  2:548945‑M1/1‑128 (MQ=255)
                                       cACGACCAGTTGCTTACGGGAGTGCGCGCGCTGTTGTGAAGGCGGAA‑‑GAAGGCGTGTGGCGATATCAAATCGGATGGCACTGGGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctggtggtgtccc                                                                                                         <  2:37218‑M1/143‑25 (MQ=255)
                                       cACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGCTGGGAGAAGGAGCGACACTCAATGCAGCCACGGc                                                                                                         >  2:680992/1‑143 (MQ=21)
                                        tggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccattagattgtaatttcttcattttcataaacgATGGATTGGGAGaaggagaaaaactccttgtgacatcgt                                                                                                          <  2:548958‑M1/39‑14 (MQ=255)
                                         cgacgcgttacttACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGACATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgg                                                                                                       <  1:72287‑M1/137‑27 (MQ=255)
                                          gtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgctttttagttcttaatatcaagagagtTTGGTTTGGGAGACGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                        <  1:635474‑M1/41‑1 (MQ=255)
                                          gtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgtcctttcttcattctcatgaaagCTCAACTGGGAGAACGAGCAAAACTCAATGCAGCAACGGCt                                                                                                        <  2:905387‑M1/41‑1 (MQ=255)
                                           actctgtaactacCGCACTTTGCGCGCGTCTGTTAAGCGGCAA‑‑GAATCCGTTTGGCGATATCAAATCGCATTGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACa                                                                                                     <  2:51661/133‑1 (MQ=21)
                                            ccAGTTACTTGCCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCTATATCAAATCGGATGGCACGGTGCAACCGGCTCTCGAAAACCTGGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc                                                                                                    <  2:842406‑M1/143‑30 (MQ=255)
                                            ccAGTTACTTCCCGCACTTCGCGCGCTGCTGTTAAGCCGCCA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc                                                                                                    <  2:846572‑M1/143‑30 (MQ=255)
                                            ccAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc                                                                                                    >  1:765568‑M1/1‑114 (MQ=255)
                                                tgacgtacCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAAGCCGTTTGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                <  1:759143/138‑1 (MQ=255)
                                                   tgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACACTAGGa                                                                                               >  1:450424‑M1/94‑143 (MQ=255)
                                                   ctcgccgcgttgcgcgcgctgctgttgagcCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAGCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc                                                                                             <  2:187639‑M1/131‑37 (MQ=255)
                                                   attcccgcacTTCGCGCGCTGCTGTTAAGCCGAAAACTAATTCG‑‑CGGCTATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc                                                                                             <  2:656690‑M1/139‑37 (MQ=255)
                                                      tacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttggtatttcttcgttttcataaacgATGGTTGGGGAGAAGGAGCAAAACTCAAGGCAGCAACGGCTACATTAGGCCGc                                                                                            <  1:531480‑M1/53‑1 (MQ=255)
                                                      acCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttacgtggccttc                                                                                          >  1:301320‑M1/1‑104 (MQ=255)
                                                       ccGCACCTCGCTCGCTGCTGTTAAGCCGCAC‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                         <  2:865297‑M1/143‑41 (MQ=255)
                                                         gcgttcatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttattacttaattttcataaacaATGGTTTGGGCGAAGGAGCAAAACTCAATGAAAcaacggctacatgagaagggact                                                                                         <  2:109980‑M1/56‑12 (MQ=255)
                                                         gcgtacatagccaataagcatgttaaatccccctggtaaacgcagcaatgatgccatttgcttgttatttcttcattttcatacacgTTGGTTTGGGAGAAGGAGCAAAACTCGATGCAGCAACggctaccttacgctccccc                                                                                         <  1:851792‑M1/56‑10 (MQ=255)
                                                         gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAGCTGCTACATGAGGACGAAcc                                                                                         <  2:763684‑M1/56‑1 (MQ=255)
                                                         gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGACAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGacgcccc                                                                                         <  2:741777‑M1/56‑4 (MQ=255)
                                                               atagccaataagcatgttaaatccccctagtaaaagcagcaatgatgccatttgcttgttatttcttcattttcctaaccgATGGTCTGAGAGAAGGCGCAAAACTCACTGCAGCAACGGCTACATTAGCACgcaccgcctcc                                                                                   <  2:533809‑M1/62‑6 (MQ=255)
                                                                 agccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                                 <  1:6662‑M1/64‑1 (MQ=255)
                                                                  gccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                <  2:431210‑M1/65‑1 (MQ=255)
                                                                   cccatacgcttggtcaatccgcctggtaacagcaggaatgacgccatttgcttgttatttcttcattttcataaaggTTGGTTTGCGAGAAGGAGCAAAACTCAATGCAGCAACGCCTACATTAGGACGCACCGGTTTCATAg                                                                               >  2:58661‑M1/78‑143 (MQ=255)
                                                                   ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagca                                                                                                              <  2:184539‑M1/35‑1 (MQ=255)
                                                                   ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagca                                                                                                              >  1:184539‑M1/78‑112 (MQ=255)
                                                                    caatacgcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCCATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                                              >  1:503024‑M1/77‑143 (MQ=255)
                                                                      agaagcatgttaaatccccctggtaagagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGGGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGgacgcaccggtatagtagtta                                                                            >  2:378676‑M1/75‑133 (MQ=255)
                                                                        ctgTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctggtggtgtcccggttccgtggcccccagcccctcccacaacagg                                                                        >  2:383826‑M1/1‑86 (MQ=255)
                                                                        aagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGGGAAGGAGCAAAACTCAATGCAGCACCGGCTACATTAGGACGCACCGGTTTCATAGCtata                                                                          <  2:649470‑M1/71‑1 (MQ=255)
                                                                              gtgaaatccccctggtaaaagcaggaatgatgccatctgcttgttatgtcttcattttcataaacgTTGGTTTGCGAGACGCAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                    >  1:586687‑M1/67‑143 (MQ=255)
                                                                               ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                   <  1:609793‑M1/78‑1 (MQ=255)
                                                                                ccGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa                                                                >  1:389154/1‑143 (MQ=255)
                                                                                 cGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaa                                                               <  1:54504‑M1/143‑67 (MQ=255)
                                                                                   cAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaat                                                             >  1:502506‑M1/1‑75 (MQ=255)
                                                                                    acacgaaccCGTTTGGCGATATCACCTCGGATGGCACGGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGCGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaa                                                              <  2:141286‑M1/139‑68 (MQ=255)
                                                                                      ctgctggtaaaagcaggaatgatgccgtttgcttgttatttcttcatttgcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTGCATAGCTATACCGGTTATGATtgg                                                            >  2:501577‑M1/59‑143 (MQ=255)
                                                                                       ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                           >  2:741280‑M1/58‑143 (MQ=255)
                                                                                       ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                           <  2:392299‑M1/86‑1 (MQ=255)
                                                                                       ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                           >  1:852874‑M1/58‑143 (MQ=255)
                                                                                          tggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTggtggt                                                        <  2:347760‑M1/89‑1 (MQ=255)
                                                                                           gggaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTa                                                       >  1:613544‑M1/54‑143 (MQ=255)
                                                                                             caaaagcaggaattgtgccatttgtttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCACTAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                     >  2:293774‑M1/52‑143 (MQ=255)
                                                                                               tttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgc                                                   >  2:593351‑M1/1‑65 (MQ=255)
                                                                                               aaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                   >  2:176688‑M1/50‑143 (MQ=255)
                                                                                                ttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgcc                                                  <  2:376460‑M1/143‑80 (MQ=255)
                                                                                                aagcaggaatgatgccatttgcttgtaatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTGTACCGGTTAGGAATGGGGGTATGGAg                                                  <  1:42735‑M1/95‑1 (MQ=255)
                                                                                                    cGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcagtggtgccgctt                                              >  1:100820‑M1/1‑60 (MQ=255)
                                                                                                     gATACCAACGCGGAGGGTACTGTGCCAACGGCTCTCGAAAGCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgttgccttcagccactccgccaacaggccagcttaagtgcaatggtgccgcttt                                             <  2:116216‑M1/143‑85 (MQ=255)
                                                                                                      atatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgattccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttt                                            >  1:572245‑M1/1‑58 (MQ=255)
                                                                                                          gatgccatttgcttgttatttcttcattttcataaacgATGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                        <  2:108920‑M1/105‑1 (MQ=255)
                                                                                                           aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcccacaggctggctgaaatgcaatggtgccgctttctctgc                                       >  2:334009‑M1/1‑53 (MQ=255)
                                                                                                           aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAAt                                       >  1:702656/1‑143 (MQ=255)
                                                                                                              tCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGTTTTCGGAGAAGGctctgcattacctgttgttttcccggttccgttgccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctga                                    <  1:556561‑M1/143‑94 (MQ=255)
                                                                                                                 gATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtc                                                                                                           <  1:267120‑M1/69‑23 (MQ=255)
                                                                                                                 gATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtc                                                                                                           >  2:267120‑M1/1‑47 (MQ=255)
                                                                                                                     gCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatac                             >  1:859449‑M1/1‑43 (MQ=255)
                                                                                                                      ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGATTATGAGTGGGGGTATTCAGCAATCAGTAATCAGTCAGTggg                            <  2:105908‑M1/117‑1 (MQ=255)
                                                                                                                       aCTGTGGCAACTGCTCTTGAATTCTTTGGTTTTGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccc                           <  2:101319‑M1/143‑103 (MQ=255)
                                                                                                                        gttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggggg                          <  2:570331‑M1/119‑1 (MQ=255)
                                                                                                                         ttattgcttcacgttcagagacgTGGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGGAATCATTCAGTGGGGGt                         >  2:86719‑M1/24‑143 (MQ=255)
                                                                                                                         tgtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccgg                         >  1:730606‑M1/1‑39 (MQ=255)
                                                                                                                          tatttcttctttttcataaacgTTGGTTTGAGAGAGGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACTGGGTTCATATCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTg                        >  1:495249‑M1/23‑143 (MQ=255)
                                                                                                                           tgCAAGCGGCTTTCGAACGCGTTGGGTTGGGGGAGGGctctgcattacctgttggtgtcccggtgccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaa                       <  2:647657‑M1/143‑107 (MQ=255)
                                                                                                                           atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAGCAGTCATCATTCAGTGGGGGTgg                       <  2:465820‑M1/122‑1 (MQ=255)
                                                                                                                             cAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtagccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaact                     >  1:202768‑M1/1‑35 (MQ=255)
                                                                                                                                 cGGCTCTCGAAAACCGTGGTTGGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                 <  1:434296/143‑1 (MQ=255)
                                                                                                                                   gCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcagtacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaa               <  1:606453‑M1/143‑115 (MQ=255)
                                                                                                                                     tttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaa             <  1:638910‑M1/132‑1 (MQ=255)
                                                                                                                                     tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgcccctttttctgctgaagaatacccggaacgggcaaagg             >  2:377978‑M1/1‑27 (MQ=255)
                                                                                                                                     tcgcgaatgcctgggtgtggGAGAAGGctctgcattagctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg             <  2:397988‑M1/134‑117 (MQ=255)
                                                                                                                                       taataaaCGTTTGTTTGGGAGAAGGAGAGAAACTTAATGGAGTAACGGCTATATTAGGACTCACCGGTTTCATAGCTATACTGGTTATGATTGGTGGTATTTAGTAATCAGTAATCATTTAGTGGGGGTGGAATGCTGCaaaa           <  2:619614/139‑1 (MQ=255)
                                                                                                                                         gAAAACCTTGGTTTGGGAGAAGGatctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgccgcagaataccaggaactgacaaaggctta         >  2:746839‑M1/1‑23 (MQ=255)
                                                                                                                                           aaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAACCAt       <  1:846745‑M1/138‑1 (MQ=255)
                                                                                                                                               cTTGGTTTGGGAGAAGGAGCGCGCTCCAACGCAACAACGACTGTAGAAGTGCGCACCGGTTTCATAGCTAGACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGc   <  1:127553/143‑1 (MQ=255)
                                                                                                                                                ttGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggggccgctttttctgctgaagaatacccggaactggcaaaggcttatccgaca  >  1:140287‑M1/1‑16 (MQ=255)
                                                                                                                                                |                                                                                                                                              
GTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAA‑‑GAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCC  >  NC_000913/1207648‑1207932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.