| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 119 [0] | [0] 113 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 113 (1.560) | 49/68 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 113 total aligned reads displayed.
ACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167450‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATA > NC_000913/173448‑173481 ACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:1126157/35‑1ACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:4408766/35‑1ACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:7502454/35‑1ACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:3254600/35‑1ACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:7196906/1‑35ACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:6204395/1‑35 CGTTATCATTCACTTTACATCAGAGATATACCATT > 1:7799616/1‑35 CGTTATCATTCACTTTACATCAGAGATATACCATT < 1:5439845/35‑1 CGTTATCATTCACTTTACATCAGAGATATACCATT < 1:6559170/35‑1 CGTTATCATTCACTTTACATCAGAGATATACCATT > 1:6155212/1‑35 TTATCATTCACTTTACATCAGAGATATACCATTCC > 1:4101824/1‑35 TTATCATTCACTTTACATCAGAGATATACCATTCC > 1:4604850/1‑35 TTATCATTCACTTTACATCAGAGATATACCATTCC > 1:6030340/1‑35 TTATCATTCACTTTACATCAGAGATATACCATTCC > 1:1874766/1‑35 TTATCATTCACTTTACATCAGAGATATACCATTCC < 1:6651566/35‑1 TATCATTCACTTTACATCAGAGATATACCATTCCA > 1:1990579/1‑35 TATCATTCACTTTACATCAGAGATATACCATTCCA < 1:3612274/35‑1 TATCATTCACTTTACATCAGAGATATACCATTCCA < 1:4908367/35‑1 TATCATTCACTTTACATCAGAGATATACCATTCCA < 1:7738834/35‑1 ATCATTCACTTTACATCAGAGATATACCATTCCAT > 1:2915291/1‑35 ATCATTCACTTTACATCAGAGATATACCATTCCAT > 1:4135605/1‑35 ATCATTCACTTTACATCAGAGATATACCATTCCAT > 1:27470/1‑35 ATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:7283094/35‑1 ATCATTCACTTTACATCAGAGATATACCATTCCAT > 1:7330711/1‑35 ATCATTCACTTTACATCAGAGATATACCATTCCAT > 1:1092344/1‑35 TCATTCACTTTACATCAGAGATATACCATTCCATA < 1:464213/35‑1 TCATTCACTTTACATCAGAGATATACCATTCCATA > 1:499122/1‑35 TCATTCACTTTACATCAGAGATATACCATTCCATA < 1:6446304/35‑1 TCATTCACTTTACATCAGAGATATACCATTCCATA < 1:4007746/35‑1 TCATTCACTTTACATCAGAGATATACCATTCCATA < 1:909975/35‑1 TCATTCACTTTACATCAGAGATATACCATTCCATA < 1:1929549/35‑1 TCATTCACTTTACATCAGAGATATACCATTCCATA > 1:226482/1‑35 CATTCACTTTACATCAGAGATATACCATTCCATAT < 1:360509/35‑1 CATTCACTTTACATCAGAGATATACCATTCCATAT < 1:5844235/35‑1 CATTCACTTTACATCAGAGATATACCATTCCATAT < 1:2879095/35‑1 CATTCACTTTACATCAGAGATATACCATTCCATAT < 1:15408/35‑1 CATTCACTTTACATCAGAGATATACCATTCCATAT < 1:7461391/35‑1 CATTCACTTTACATCAGAGATATACCATTCCATAT < 1:7523978/35‑1 CATTCACTTTACATCAGAGATATACCATTCCATAT < 1:7726399/35‑1 ATTCACTTTACATCAGAGATATACCATTCCATATA < 1:3485457/35‑1 ATTCACTTTACATCAGAGATATACCATTCCATATA > 1:6807380/1‑35 ATTCACTTTACATCAGAGATATACCATTCCATATA > 1:2639258/1‑35 ATTCACTTTACATCAGAGATATACCATTCCATATA > 1:485998/1‑35 TTCACTTTACATCAGAGATATACCATTCCATATAA > 1:4199776/1‑35 TCACTTTACATCAGAGATATACCATTCCATATAAC < 1:3836532/35‑1 CACTTTACATCAGAGATATACCATTCCATATAACG > 1:5238148/1‑35 CACTTTACATCAGAGATATACCATTCCATATAACG > 1:6088159/1‑35 ACTTTACATCAGAGATATACCATTCCATATAACGG < 1:3786678/35‑1 ACTTTACATCAGAGATATACCATTCCATATAACGG > 1:6412912/1‑35 TTACATCAGAGATATACCATTCCATATAACGGCCC > 1:1809240/1‑35 TTACATCAGAGATATACCATTCCATATAACGGCCC < 1:209834/35‑1 TTACATCAGAGATATACCATTCCATATAACGGCCC < 1:4275685/35‑1 TTACATCAGAGATATACCATTCCATATAACGGCCC < 1:3634752/35‑1 TACATCAGAGATATACCATTCCATATAACGGCCCT > 1:215312/1‑35 TACATCAGAGATATACCATTCCATATAACGGCCCT > 1:7058580/1‑35 TACATCAGAGATATACCATTCCATATAACGGCCCT > 1:7889405/1‑35 TACATCAGAGATATACCATTCCATATAACGGCCCT > 1:1052789/1‑35 TACATCAGAGATATACCATTCCATATAACGGCCCT > 1:2859072/1‑35 TACATCAGAGATATACCATTCCATATAACGGCCCT > 1:3222768/1‑35 ACATCAGAGATATACCATTCCATATAACGGCCCTG < 1:1845089/35‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:83988/1‑35 ACATCAGAGATATACCATTCCATATAACGGCCCTG < 1:1122138/35‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:1218031/1‑35 ACATCAGAGATATACCATTCCATATAACGGCCCTG < 1:7387962/35‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTG < 1:2524571/35‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:5692149/35‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:421526/35‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:4706445/35‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:3076292/1‑35 ATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:2216137/35‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTAC > 1:6333388/1‑35 AGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:6802939/1‑35 AGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:7707715/1‑35 GAGATATACCATTCCATATAACGGCCCTGTACGCC > 1:3240651/1‑35 GAGATATACCATTCCATATAACGGCCCTGTACGCC < 1:6202482/35‑1 AGATATACCATTCCATATAACGGCCCTGTACGCCT > 1:2571893/1‑35 GATATACCATTCCATATAACGGCCCTGTACGCCTG < 1:5579901/35‑1 GATATACCATTCCATATAACGGCCCTGTACGCCTG < 1:1212384/35‑1 GATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:1823348/1‑35 ATATACCATTCCATATAACGGCCCTGTACGCCTGG < 1:2746617/35‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGG > 1:2355967/1‑35 ATATACCATTCCATATAACGGCCCTGTACGCCTGG > 1:4855304/1‑35 TATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:2277522/1‑35 TATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:5089491/1‑35 TATACCATTCCATATAACGGCCCTGTACGCCTGGA < 1:5540371/35‑1 TATACCATTCCATATAACGGCCCTGTACGCCTGGA < 1:1654682/35‑1 TATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:3570468/1‑35 TATACCATTCCATATAACGGCCCTGTACGCCTGGA < 1:674335/35‑1 TATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:6030497/1‑35 ATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:1988971/1‑35 ATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:2508145/1‑35 TACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:3607747/1‑35 TACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:2337353/35‑1 ACCATTCCATATAACGGCCCTGTACGCCTGGACGG > 1:1291866/1‑35 ACCATTCCATATAACGGCCCTGTACGCCTGGACGG < 1:2980793/35‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:3854803/1‑35 CCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:4713891/35‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:4430136/1‑35 CCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:4757747/35‑1 ATTCCATATAACGGCCCTGTACGCCTGGACGGATA < 1:7316937/35‑1 ACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167450‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATA > NC_000913/173448‑173481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |