| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908 | 258683 | 776 | 105 [0] | [0] 109 | insB9–[crl] | insB9,insA9,[crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 77 (1.390) | 30/52 | 0.0 | 100% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
Only 100 of 120 total aligned reads displayed.
TCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257866‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCT > NC_000913/258684‑258717 TCAAAAAATTTACCGCACTAGGCCCGTATATTCGT < 1:1738280/35‑1TCAAAAAATTTACCGCACTAGGCCCGTATATTCGT < 1:3081032/35‑1 CAAAAAATTTACCGCACTAGGCCCGTATATTCGTG < 1:6674714/35‑1 CAAAAAATTTACCGCACTAGGCCCGTATATTCGTG < 1:1311228/35‑1 CAAAAAATTTACCGCACTAGGCCCGTATATTCGTG < 1:6647632/35‑1 CAAAAAATTTACCGCACTAGGCCCGTATATTCGTG < 1:4318242/35‑1 CAAAAAATTTACCGCACTAGGCCCGTATATTCGTG < 1:2452962/35‑1 AAAAAATTTACCGCACTAGGCCCGTATATTCGTGA > 1:7798881/1‑35 AAAAATTTACCGCACTAGGCCCGTATATTCGTGAA < 1:2421704/35‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGG < 1:7183433/35‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGG < 1:7156387/35‑1 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 1:6481501/1‑35 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 1:4130532/1‑35 ATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA > 1:570815/1‑35 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAA > 1:1064838/1‑35 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAA < 1:456687/35‑1 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAA > 1:2355824/1‑35 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAA > 1:1056481/1‑35 TTACCGCACTAGGCCCGTATATTCGTGAAGGTAAG > 1:3580367/1‑35 ACCGCACTAGGCCCGTATATTTGTGAAGGTAAGTG < 1:5464584/35‑1 ACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG < 1:4645693/35‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC < 1:5830597/35‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC < 1:3899389/35‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC > 1:2900797/1‑35 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC < 1:677951/35‑1 CGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA < 1:6906599/35‑1 CGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA < 1:4013945/35‑1 GCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAA < 1:1810299/35‑1 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAA < 1:77497/35‑1 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAA < 1:3497495/35‑1 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAA < 1:3497494/35‑1 CACTAGGCCCGTATATTCCTGAAGGTAAGTGCAAA > 1:2457945/1‑35 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAG > 1:4416320/1‑35 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAG > 1:3460313/1‑35 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGA < 1:4334652/35‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGA < 1:7378425/35‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGA < 1:5777344/35‑1 TAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGAT < 1:1866758/35‑1 AGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATA < 1:1376231/35‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:4444914/35‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA > 1:529061/1‑35 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:4839953/35‑1 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATC < 1:7747705/35‑1 CGTATATTCGTGAAGGTAAGTGCAAAGATAATCGA > 1:5254933/1‑35 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATn < 1:2305561/35‑2 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATT > 1:4798433/1‑35 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATT > 1:4743588/1‑35 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 1:2381040/35‑1 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 1:5657824/35‑1 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 1:3544806/35‑1 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATT > 1:3152955/1‑35 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 1:2502635/35‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT < 1:890388/35‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT > 1:601254/1‑35 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT < 1:6023951/35‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT < 1:6871173/35‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT > 1:7311629/1‑35 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT > 1:4023871/1‑35 ATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT < 1:2960273/35‑1 ATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT < 1:1154560/35‑1 ATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT < 1:362240/35‑1 ATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT < 1:3634310/35‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT < 1:6389073/35‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT < 1:2897708/35‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT < 1:3472333/35‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT > 1:6901664/1‑35 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT < 1:1138963/35‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT < 1:2498604/35‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT > 1:2479607/1‑35 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT < 1:1945250/35‑1 TCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 1:6983723/35‑1 TCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 1:2382220/35‑1 TCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 1:4612844/35‑1 CGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 1:3521884/35‑1 CGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 1:2665266/35‑1 CGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 1:4332026/35‑1 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:4069329/1‑35 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:5094629/1‑35 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:6934485/1‑35 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCG < 1:6352948/35‑1 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCG > 1:1886446/1‑35 GAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGA < 1:2620838/35‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGAT > 1:6325461/1‑35 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGAT > 1:4829723/1‑35 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT > 1:878776/1‑35 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT > 1:2395845/1‑35 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT > 1:2480113/1‑35 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG < 1:1361985/35‑1 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG < 1:579471/35‑1 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG > 1:2503521/1‑35 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG < 1:4846225/35‑1 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG < 1:4810694/35‑1 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT > 1:7100334/1‑35 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT < 1:145162/35‑1 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT > 1:4118815/1‑35 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT > 1:5701832/1‑35 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT < 1:145115/35‑1 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT < 1:6750737/35‑1 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC < 1:4695503/35‑1 AAGTGCAAAGATAATCGATTCTTTTTCGATTGTCT < 1:1082704/35‑1 TCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257866‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCT > NC_000913/258684‑258717 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |