| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908 | 258683 | 776 | 105 [0] | [0] 109 | insB9–[crl] | insB9,insA9,[crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 77 (1.390) | 30/52 | 0.0 | 100% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
Only 100 of 105 total aligned reads displayed.
ATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATG > NC_000913/257873‑257941 | aTTTACCGCACTAGGCCCGTATATTCGTGAAGGTA > 1:570815‑M1/1‑35 (MQ=255) tttACCGCACTAGGCCCGTATATTCGTGAAGGTAa > 1:1064838‑M1/1‑34 (MQ=255) tttACCGCACTAGGCCCGTATATTCGTGAAGGTAa > 1:2355824‑M1/1‑34 (MQ=255) tttACCGCACTAGGCCCGTATATTCGTGAAGGTAa < 1:456687‑M1/35‑2 (MQ=255) tttACCGCACTAGGCCCGTATATTCGTGAAGGTAa > 1:1056481‑M1/1‑34 (MQ=255) ttACCGCACTAGGCCCGTATATTCGTGAAGGTAag > 1:3580367‑M1/1‑33 (MQ=255) ttACCGCACTAGGCCCGTATATTCGTGAAGGTAag > 1:2105391‑M1/1‑33 (MQ=255) aCCGCACTAGGCCCGTATATTTGTGAAGGTAagtg < 1:5464584‑M1/35‑5 (MQ=255) aCCGCACTAGGCCCGTATATTCGTGAAGGTAagtg < 1:4645693‑M1/35‑5 (MQ=255) ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgc < 1:7557793‑M1/35‑6 (MQ=255) ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgc < 1:5830597‑M1/35‑6 (MQ=255) ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgc > 1:2900797‑M1/1‑30 (MQ=255) ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgc > 1:6424722‑M1/1‑30 (MQ=255) ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgc < 1:677951‑M1/35‑6 (MQ=255) ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgc < 1:3899389‑M1/35‑6 (MQ=255) cGCACTAGGCCCGTATATTCGTGAAGGTAagtgca < 1:6906599‑M1/35‑7 (MQ=255) cGCACTAGGCCCGTATATTCGTGAAGGTAagtgca < 1:7033967‑M1/35‑7 (MQ=255) cGCACTAGGCCCGTATATTCGTGAAGGTAagtgca < 1:4013945‑M1/35‑7 (MQ=255) gCACTAGGCCCGTATATTCGTGAAGGTAagtgcaa < 1:1810299‑M1/35‑8 (MQ=255) cACTAGGCCCGTATATTCGTGAAGGTAagtgcaaa < 1:3949781‑M1/35‑9 (MQ=255) cACTAGGCCCGTATATTCGTGAAGGTAagtgcaaa < 1:3497495‑M1/35‑9 (MQ=255) cACTAGGCCCGTATATTCGTGAAGGTAagtgcaaa < 1:3497494‑M1/35‑9 (MQ=255) cACTAGGCCCGTATATTCGTGAAGGTAagtgcaaa < 1:77497‑M1/35‑9 (MQ=255) cACTAGGCCCGTATATTCCTGAAGGTAagtgcaaa > 1:2457945‑M1/1‑27 (MQ=255) aCTAGGCCCGTATATTCGTGAAGGTAagtgcaaag > 1:3460313‑M1/1‑26 (MQ=255) aCTAGGCCCGTATATTCGTGAAGGTAagtgcaaag > 1:4416320‑M1/1‑26 (MQ=255) cTAGGCCCGTATATTCGTGAAGGTAagtgcaaaga < 1:4334652‑M1/35‑11 (MQ=255) cTAGGCCCGTATATTCGTGAAGGTAagtgcaaaga < 1:5777344‑M1/35‑11 (MQ=255) cTAGGCCCGTATATTCGTGAAGGTAagtgcaaaga < 1:7378425‑M1/35‑11 (MQ=255) tAGGCCCGTATATTCGTGAAGGTAagtgcaaagat < 1:1866758‑M1/35‑12 (MQ=255) aGGCCCGTATATTCGTGAAGGTAagtgcaaagata < 1:1376231‑M1/35‑13 (MQ=255) aGGCCCGTATATTCGTGAAGGTAagtgcaaagata < 1:2419828‑M1/35‑13 (MQ=255) ggCCCGTATATTCGTGAAGGTAagtgcaaagataa > 1:2848238‑M1/1‑22 (MQ=255) ggCCCGTATATTCGTGAAGGTAagtgcaaagataa < 1:4444914‑M1/35‑14 (MQ=255) ggCCCGTATATTCGTGAAGGTAagtgcaaagataa > 1:529061‑M1/1‑22 (MQ=255) ggCCCGTATATTCGTGAAGGTAagtgcaaagataa < 1:4839953‑M1/35‑14 (MQ=255) cccGTATATTCGTGAAGGTAagtgcaaagataatc < 1:7747705‑M1/35‑16 (MQ=255) cGTATATTCGTGAAGGTAagtgcaaagataatcga > 1:5254933‑M1/1‑18 (MQ=255) tataTTCGTGAAGGTAagtgcaaagataatcgatt < 1:2502635‑M1/35‑20 (MQ=255) tataTTCGTGAAGGTAagtgcaaagataatcgatt > 1:4743588‑M1/1‑16 (MQ=255) tataTTCGTGAAGGTAagtgcaaagataatcgatt > 1:4798433‑M1/1‑16 (MQ=255) tataTTCGTGAAGGTAagtgcaaagataatcgatt < 1:3544806‑M1/35‑20 (MQ=255) tataTTCGTGAAGGTAagtgcaaagataatcgatt < 1:2381040‑M1/35‑20 (MQ=255) tataTTCGTGAAGGTAagtgcaaagataatcgatt > 1:3152955‑M1/1‑16 (MQ=255) tataTTCGTGAAGGTAagtgcaaagataatcgatt < 1:5657824‑M1/35‑20 (MQ=255) tataTTCGTGAAGGTAagtgcaaagataatcgatt > 1:5677555‑M1/1‑16 (MQ=255) tataTTCGTGAAGGTAagtgcaaagataatcgatn < 1:2305561‑M1/35‑20 (MQ=255) atatTCGTGAAGGTAagtgcaaagataatcgattc > 1:2486945‑M1/1‑15 (MQ=255) tatTCGTGAAGGTAagtgcaaagataatcgattct < 1:6871173‑M1/35‑22 (MQ=255) tatTCGTGAAGGTAagtgcaaagataatcgattct < 1:6023951‑M1/35‑22 (MQ=255) tatTCGTGAAGGTAagtgcaaagataatcgattct > 1:7311629‑M1/1‑14 (MQ=255) tatTCGTGAAGGTAagtgcaaagataatcgattct > 1:601254‑M1/1‑14 (MQ=255) tatTCGTGAAGGTAagtgcaaagataatcgattct < 1:890388‑M1/35‑22 (MQ=255) tatTCGTGAAGGTAagtgcaaagataatcgattct > 1:4023871‑M1/1‑14 (MQ=255) atTCGTGAAGGTAagtgcaaagataatcgattctt < 1:1154560‑M1/35‑23 (MQ=255) atTCGTGAAGGTAagtgcaaagataatcgattctt < 1:3634310‑M1/35‑23 (MQ=255) atTCGTGAAGGTAagtgcaaagataatcgattctt < 1:362240‑M1/35‑23 (MQ=255) atTCGTGAAGGTAagtgcaaagataatcgattctt < 1:2960273‑M1/35‑23 (MQ=255) ttCGTGAAGGTAagtgcaaagataatcgattcttt > 1:4205773‑M1/1‑12 (MQ=255) ttCGTGAAGGTAagtgcaaagataatcgattcttt < 1:1138963‑M1/35‑24 (MQ=255) ttCGTGAAGGTAagtgcaaagataatcgattcttt > 1:6901664‑M1/1‑12 (MQ=255) ttCGTGAAGGTAagtgcaaagataatcgattcttt < 1:1945250‑M1/35‑24 (MQ=255) ttCGTGAAGGTAagtgcaaagataatcgattcttt < 1:6389073‑M1/35‑24 (MQ=255) ttCGTGAAGGTAagtgcaaagataatcgattcttt > 1:2479607‑M1/1‑12 (MQ=255) ttCGTGAAGGTAagtgcaaagataatcgattcttt < 1:2498604‑M1/35‑24 (MQ=255) ttCGTGAAGGTAagtgcaaagataatcgattcttt < 1:2897708‑M1/35‑24 (MQ=255) ttCGTGAAGGTAagtgcaaagataatcgattcttt < 1:3472333‑M1/35‑24 (MQ=255) tCGTGAAGGTAagtgcaaagataatcgattctttt < 1:6983723‑M1/35‑25 (MQ=255) tCGTGAAGGTAagtgcaaagataatcgattctttt < 1:4612844‑M1/35‑25 (MQ=255) tCGTGAAGGTAagtgcaaagataatcgattctttt < 1:2382220‑M1/35‑25 (MQ=255) cGTGAAGGTAagtgcaaagataatcgattcttttt < 1:2665266‑M1/35‑26 (MQ=255) cGTGAAGGTAagtgcaaagataatcgattcttttt < 1:4332026‑M1/35‑26 (MQ=255) gTGAAGGTAagtgcaaagataatcgattctttttc > 1:6934485‑M1/1‑9 (MQ=255) gTGAAGGTAagtgcaaagataatcgattctttttc < 1:6806132‑M1/35‑27 (MQ=255) gTGAAGGTAagtgcaaagataatcgattctttttc > 1:4069329‑M1/1‑9 (MQ=255) gTGAAGGTAagtgcaaagataatcgattctttttc > 1:5094629‑M1/1‑9 (MQ=255) tGAAGGTAagtgcaaagataatcgattctttttcg < 1:3319182‑M1/35‑28 (MQ=255) tGAAGGTAagtgcaaagataatcgattctttttcg > 1:1886446‑M1/1‑8 (MQ=255) tGAAGGTAagtgcaaagataatcgattctttttcg < 1:6352948‑M1/35‑28 (MQ=255) gAAGGTAagtgcaaagataatcgattctttttcga < 1:2620838‑M1/35‑29 (MQ=255) aaGGTAagtgcaaagataatcgattctttttcgat < 1:5903551‑M1/35‑30 (MQ=255) aaGGTAagtgcaaagataatcgattctttttcgat > 1:4829723‑M1/1‑6 (MQ=255) aGGTAagtgcaaagataatcgattctttttcgatt > 1:2480113‑M1/1‑5 (MQ=255) aGGTAagtgcaaagataatcgattctttttcgatt > 1:878776‑M1/1‑5 (MQ=255) ggTAagtgcaaagataatcgattctttttcgattg < 1:4810694‑M1/35‑32 (MQ=255) ggTAagtgcaaagataatcgattctttttcgattg < 1:579471‑M1/35‑32 (MQ=255) ggTAagtgcaaagataatcgattctttttcgattg > 1:2503521‑M1/1‑4 (MQ=255) ggTAagtgcaaagataatcgattctttttcgattg < 1:4846225‑M1/35‑32 (MQ=255) ggTAagtgcaaagataatcgattctttttcgattg > 1:15353‑M1/1‑4 (MQ=255) ggTAagtgcaaagataatcgattctttttcgattg > 1:4851888‑M1/1‑4 (MQ=255) ggTAagtgcaaagataatcgattctttttcgattg < 1:1361985‑M1/35‑32 (MQ=255) gTAagtgcaaagataatcgattctttttcgattgt < 1:6750737‑M1/35‑33 (MQ=255) gTAagtgcaaagataatcgattctttttcgattgt > 1:4118815‑M1/1‑3 (MQ=255) gTAagtgcaaagataatcgattctttttcgattgt < 1:1258843‑M1/35‑33 (MQ=255) gTAagtgcaaagataatcgattctttttcgattgt < 1:145115‑M1/35‑33 (MQ=255) gTAagtgcaaagataatcgattctttttcgattgt > 1:7100334‑M1/1‑3 (MQ=255) gTAagtgcaaagataatcgattctttttcgattgt < 1:145162‑M1/35‑33 (MQ=255) gTAagtgcaaagataatcgattctttttcgattgt > 1:5701832‑M1/1‑3 (MQ=255) tAagtgcaaagataatcgattctttttcgattgtc < 1:4695503‑M1/35‑34 (MQ=255) aagtgcaaagataatcgattctttttcgattgtct < 1:1082704‑M1/35‑35 (MQ=255) | ATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATG > NC_000913/257873‑257941 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |