| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 123 [0] | [0] 122 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 120 (1.660) | 48/68 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
Only 100 of 120 total aligned reads displayed.
GCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675518‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATAT > NC_000913/683371‑683404 GCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:5797313/1‑35GCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:2632749/1‑35GCAATAAAGAGAATATGGGCCGAATGAAATTCCCA < 1:3827440/35‑1GCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:5007291/1‑35GCAATAAAGAGAATATGGGCCGAATGAAATTCCCA < 1:537682/35‑1GCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:7012146/1‑35 CAATAAAGAGAATATGGGCCGAATGAAATTCCCAT > 1:5834105/1‑35 CAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:349902/35‑1 CAATAAAGAGAATATGGGCCGAATGAAATTCCCAT > 1:5571495/1‑35 tATAAAGAGAATATGGGCCGAATGAAATTCCCATG > 1:6679522/2‑35 AATAAAGAGAATATGGGCCGAATGAAATTCCCATG > 1:2145038/1‑35 AATAAAGAGAATATGGGCCGAATGAAATTCCCATG < 1:1705847/35‑1 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGG < 1:6079916/35‑1 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGG > 1:356932/1‑35 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGG > 1:624600/1‑35 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:2634886/1‑35 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:2678832/1‑35 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:4081957/1‑35 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGC < 1:4154764/35‑1 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:1365981/1‑35 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:3699450/1‑35 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGA > 1:6336575/1‑35 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGA > 1:2574048/1‑35 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGA > 1:1604000/1‑35 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGA > 1:5357634/1‑35 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGA > 1:3523960/1‑35 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAG < 1:3846870/35‑1 GAGAATATGGGCCGAATGAAATTCCCATGGCGAGT > 1:20234/1‑35 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTC < 1:2302534/35‑1 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTC > 1:6451961/1‑35 AATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:616573/1‑35 AATATGGGCCGAATGAAATTCCCATGGCGAGTTCT < 1:7414832/35‑1 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:5348071/1‑35 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:3212527/1‑35 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:3135122/1‑35 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG < 1:522623/35‑1 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG < 1:7081776/35‑1 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG < 1:7102132/35‑1 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:7158080/1‑35 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:4354829/1‑35 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:4503223/1‑35 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:4698689/1‑35 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGC < 1:320235/35‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGC > 1:3293185/1‑35 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGC > 1:3817495/1‑35 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGC > 1:1110829/1‑35 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT < 1:2800196/35‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT < 1:3477837/35‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT < 1:3064683/35‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:6081495/1‑35 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT < 1:2306114/35‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:2112957/1‑35 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT < 1:1233874/35‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT < 1:1020915/35‑1 GGGCCGAATGAAATTCCCATGGCGAGTTCTGCATT > 1:7534661/1‑35 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA < 1:7687149/35‑1 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA < 1:6765494/35‑1 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA < 1:4880401/35‑1 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATC > 1:4334691/1‑35 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATC < 1:6097763/35‑1 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATC < 1:5835938/35‑1 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATC < 1:5417025/35‑1 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCC < 1:4064521/35‑1 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCA > 1:3174857/1‑35 AATGAAATTCCCATGGCGAGTTCTGCATTATCCAT > 1:4639124/1‑35 AATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:3251096/35‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:7413304/35‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:7598978/35‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATT > 1:6746317/1‑35 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATT < 1:6751373/35‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATT > 1:2216073/1‑35 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATT < 1:2475441/35‑1 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTG < 1:2125426/35‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCAT < 1:5426803/35‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCAT > 1:5871753/1‑35 AATTCCCATGGCGAGTTCTGCATTATCCATTGCAT < 1:2957075/35‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:196894/35‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:6631042/35‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATT > 1:6212687/1‑35 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:3313502/35‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:37960/35‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTT > 1:351624/1‑35 TCCCATGGCGAGTTCTGCATTATCCATTGCATTTA < 1:5229402/35‑1 TCCCATGGCGAGTTCTGCATTATCCATTGCATTTA < 1:5320370/35‑1 TCCCATGGCGAGTTCTGCATTATCCATTGCATTTA < 1:6941200/35‑1 TCCCATGGCGAGTTCTGCATTATCCATTGCATTTA < 1:1821804/35‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTAT > 1:6230855/1‑35 CCCATGGCGAGTTCTGCATTATCCATTGCATTTAT < 1:2996091/35‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTAT < 1:2056164/35‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATA < 1:1966438/35‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATA < 1:1197915/35‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATA < 1:1341015/35‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATA < 1:1461312/35‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATA > 1:1637169/1‑35 CCATGGCGAGTTCTGCATTATCCATTGCATTTATA > 1:2454974/1‑35 CCATGGCGAGTTCTGCATTATCCATTGCATTTATA > 1:5449506/1‑35 CCATGGCGAGTTCTGCATTATCCATTGCATTTATA > 1:5457671/1‑35 CATGGCGAGTTCTGCATTATCCATTGCATTTATAT < 1:1430674/35‑1 CATGGCGAGTTCTGCATTATCCATTGCATTTATAT < 1:659337/35‑1 CATGGCGAGTTCTGCATTATCCATTGCATTTATAT < 1:1003469/35‑1 GCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675518‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATAT > NC_000913/683371‑683404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |