| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 123 [0] | [0] 122 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 120 (1.660) | 48/68 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
Only 100 of 123 total aligned reads displayed.
AGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCA > NC_000913/675517‑675585 | aGCAATAAAGAGAATATGGGCCGAATGAAATTccc < 1:5912413/35‑1 (MQ=255)aGCAATAAAGAGAATATGGGCCGAATGAAATTccc < 1:3725966/35‑1 (MQ=255)aGCAATAAAGAGAATATGGGCCGAATGAAATTccc > 1:1694435/1‑35 (MQ=255) gCAATAAAGAGAATATGGGCCGAATGAAATTCCCa > 1:4051248‑M1/1‑34 (MQ=255) gCAATAAAGAGAATATGGGCCGAATGAAATTCCCa > 1:5007291‑M1/1‑34 (MQ=255) gCAATAAAGAGAATATGGGCCGAATGAAATTCCCa > 1:5797313‑M1/1‑34 (MQ=255) gCAATAAAGAGAATATGGGCCGAATGAAATTCCCa < 1:3827440‑M1/35‑2 (MQ=255) cAATAAAGAGAATATGGGCCGAATGAAATTCCCat < 1:349902‑M1/35‑3 (MQ=255) cAATAAAGAGAATATGGGCCGAATGAAATTCCCat > 1:5571495‑M1/1‑33 (MQ=255) cAATAAAGAGAATATGGGCCGAATGAAATTCCCat > 1:5834105‑M1/1‑33 (MQ=255) aaTAAAGAGAATATGGGCCGAATGAAATTCCCatg < 1:1705847‑M1/35‑4 (MQ=255) aaTAAAGAGAATATGGGCCGAATGAAATTCCCatg > 1:446691‑M1/1‑32 (MQ=255) aaTAAAGAGAATATGGGCCGAATGAAATTCCCatg > 1:2145038‑M1/1‑32 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatgg > 1:624600‑M1/1‑31 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatgg > 1:6217602‑M1/1‑31 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatgg < 1:6079916‑M1/35‑5 (MQ=255) tAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 1:3699450‑M1/1‑30 (MQ=255) tAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 1:2634886‑M1/1‑30 (MQ=255) tAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 1:2678832‑M1/1‑30 (MQ=255) tAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 1:4081957‑M1/1‑30 (MQ=255) tAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 1:1365981‑M1/1‑30 (MQ=255) aaaGAGAATATGGGCCGAATGAAATTCCCatggcg > 1:6624443‑M1/1‑29 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcga > 1:3523960‑M1/1‑28 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcga > 1:3676606‑M1/1‑28 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcga > 1:5357634‑M1/1‑28 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcga > 1:2574048‑M1/1‑28 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcga > 1:592724‑M1/1‑28 (MQ=255) agagAATATGGGCCGAATGAAATTCCCatggcgag > 1:5359067‑M1/1‑27 (MQ=255) agagAATATGGGCCGAATGAAATTCCCatggcgag < 1:3846870‑M1/35‑9 (MQ=255) gagaATATGGGCCGAATGAAATTCCCatggcgagt > 1:20234‑M1/1‑26 (MQ=255) gaATATGGGCCGAATGAAATTCCCatggcgagttc > 1:6451961‑M1/1‑24 (MQ=255) aaTATGGGCCGAATGAAATTCCCatggcgagttct < 1:7414832‑M1/35‑13 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctg > 1:3212527‑M1/1‑22 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctg > 1:7158080‑M1/1‑22 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctg < 1:7102132‑M1/35‑14 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctg < 1:7081776‑M1/35‑14 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctg > 1:5348071‑M1/1‑22 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctg > 1:3135122‑M1/1‑22 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctg > 1:4354829‑M1/1‑22 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctg > 1:4503223‑M1/1‑22 (MQ=255) atatGGGCCGAATGAAATTCCCatggcgagttctg > 1:4698689‑M1/1‑22 (MQ=255) tatGGGCCGAATGAAATTCCCatggcgagttctgc > 1:3293185‑M1/1‑21 (MQ=255) tatGGGCCGAATGAAATTCCCatggcgagttctgc < 1:320235‑M1/35‑15 (MQ=255) tatGGGCCGAATGAAATTCCCatggcgagttctgc > 1:1110829‑M1/1‑21 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcat > 1:6081495‑M1/1‑19 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcat < 1:1020915‑M1/35‑17 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcat < 1:3477837‑M1/35‑17 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcat < 1:1233874‑M1/35‑17 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcat < 1:3064683‑M1/35‑17 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcat < 1:2306114‑M1/35‑17 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcat < 1:2800196‑M1/35‑17 (MQ=255) gggCCGAATGAAATTCCCatggcgagttctgcatt > 1:7534661‑M1/1‑18 (MQ=255) ggCCGAATGAAATTCCCatggcgagttctgcatta < 1:7687149‑M1/35‑19 (MQ=255) ggCCGAATGAAATTCCCatggcgagttctgcatta < 1:7223720‑M1/35‑19 (MQ=255) ggCCGAATGAAATTCCCatggcgagttctgcatta < 1:6765494‑M1/35‑19 (MQ=255) ggCCGAATGAAATTCCCatggcgagttctgcatta < 1:4880401‑M1/35‑19 (MQ=255) ccGAATGAAATTCCCatggcgagttctgcattatc < 1:5835938‑M1/35‑21 (MQ=255) ccGAATGAAATTCCCatggcgagttctgcattatc < 1:6097763‑M1/35‑21 (MQ=255) ccGAATGAAATTCCCatggcgagttctgcattatc < 1:5417025‑M1/35‑21 (MQ=255) ccGAATGAAATTCCCatggcgagttctgcattatc > 1:4334691‑M1/1‑15 (MQ=255) ccGAATGAAATTCCCatggcgagttctgcattatc < 1:2888666‑M1/35‑21 (MQ=255) cGAATGAAATTCCCatggcgagttctgcattatcc < 1:4064521‑M1/35‑22 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatcca > 1:3174857‑M1/1‑13 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccat < 1:3251096‑M1/35‑24 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccat < 1:7598978‑M1/35‑24 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccat < 1:2162150‑M1/35‑24 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccat < 1:1971948‑M1/35‑24 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccat > 1:1630773‑M1/1‑12 (MQ=255) aTGAAATTCCCatggcgagttctgcattatccatt < 1:2475441‑M1/35‑25 (MQ=255) aTGAAATTCCCatggcgagttctgcattatccatt > 1:2216073‑M1/1‑11 (MQ=255) aTGAAATTCCCatggcgagttctgcattatccatt < 1:6751373‑M1/35‑25 (MQ=255) aTGAAATTCCCatggcgagttctgcattatccatt > 1:6746317‑M1/1‑11 (MQ=255) aTGAAATTCCCatggcgagttctgcattatccatt > 1:5181803‑M1/1‑11 (MQ=255) tGAAATTCCCatggcgagttctgcattatccattg > 1:6902104‑M1/1‑10 (MQ=255) tGAAATTCCCatggcgagttctgcattatccattg < 1:2125426‑M1/35‑26 (MQ=255) aaTTCCCatggcgagttctgcattatccattgcat < 1:5426803‑M1/35‑29 (MQ=255) aTTCCCatggcgagttctgcattatccattgcatt < 1:3313502‑M1/35‑30 (MQ=255) aTTCCCatggcgagttctgcattatccattgcatt < 1:37960‑M1/35‑30 (MQ=255) aTTCCCatggcgagttctgcattatccattgcatt < 1:6631042‑M1/35‑30 (MQ=255) aTTCCCatggcgagttctgcattatccattgcatt < 1:196894‑M1/35‑30 (MQ=255) aTTCCCatggcgagttctgcattatccattgcatt > 1:6212687‑M1/1‑6 (MQ=255) ttCCCatggcgagttctgcattatccattgcattt > 1:351624‑M1/1‑5 (MQ=255) tCCCatggcgagttctgcattatccattgcattta < 1:1821804‑M1/35‑32 (MQ=255) tCCCatggcgagttctgcattatccattgcattta < 1:5229402‑M1/35‑32 (MQ=255) tCCCatggcgagttctgcattatccattgcattta < 1:5320370‑M1/35‑32 (MQ=255) tCCCatggcgagttctgcattatccattgcattta < 1:6941200‑M1/35‑32 (MQ=255) cccatggcgagttctgcattatccattgcatttat > 1:6230855‑M1/1‑3 (MQ=255) cccatggcgagttctgcattatccattgcatttat < 1:2056164‑M1/35‑33 (MQ=255) cccatggcgagttctgcattatccattgcatttat < 1:2996091‑M1/35‑33 (MQ=255) ccatggcgagttctgcattatccattgcatttata > 1:5457671‑M1/1‑2 (MQ=255) ccatggcgagttctgcattatccattgcatttata > 1:2484629‑M1/1‑2 (MQ=255) ccatggcgagttctgcattatccattgcatttata > 1:2454974‑M1/1‑2 (MQ=255) ccatggcgagttctgcattatccattgcatttata < 1:1197915‑M1/35‑34 (MQ=255) ccatggcgagttctgcattatccattgcatttata < 1:1341015‑M1/35‑34 (MQ=255) ccatggcgagttctgcattatccattgcatttata > 1:5449506‑M1/1‑2 (MQ=255) ccatggcgagttctgcattatccattgcatttata < 1:1461312‑M1/35‑34 (MQ=255) ccatggcgagttctgcattatccattgcatttata > 1:1637169‑M1/1‑2 (MQ=255) catggcgagttctgcattatccattgcatttatat < 1:1430674‑M1/35‑35 (MQ=255) catggcgagttctgcattatccattgcatttatat < 1:1003469‑M1/35‑35 (MQ=255) catggcgagttctgcattatccattgcatttatat < 1:659337‑M1/35‑35 (MQ=255) | AGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCA > NC_000913/675517‑675585 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |