| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,223,090 | Δ4 bp | coding (71‑74/174 nt) | ymgI ← | uncharacterized protein YmgI |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1223090 | 1223093 | 4 | 71 [0] | [0] 65 | ymgI | uncharacterized protein YmgI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1223089 | 0 (0.000) | 56 (0.800) | 19/66 | 0.9 | 100% | coding (75/174 nt) | ymgI | uncharacterized protein YmgI |
| ? | NC_000913 | 1223094 = | 0 (0.000) | coding (70/174 nt) | ymgI | uncharacterized protein YmgI | |||||
TTCAGATAATTCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1223075‑1223089‑‑‑‑‑‑‑‑‑‑‑‑‑‑aGCGTGGCTGTGATGATAGGAATTATGTTTTTTAC > NC_000913/1223094‑1223127 aTCAGATAATTCAAAGCGTGGCTGTGATGATAGGA > 1:1322301/2‑35aTCAGATAATTCAAAGCGTGGCTGTGATGATAGGA > 1:6098993/2‑35aTCAGATAATTCAAAGCGTGGCTGGGATGATAGGA > 1:1757663/2‑35 TCAGATAATTCAAAGCGTGGCTGTGATGATAGGAA < 1:535161/35‑1 TCAGATAATTCAAAGCGTGGCTGTGATGATAGGAA < 1:1163172/35‑1 TCAGATAATTCAAAGCGTGGCTGTGATGATAGGAA > 1:7293419/1‑35 TCAGATAATTCAAAGCGTGGCTGTGATGATAGGAA > 1:4724031/1‑35 TCAGATAATTCAAAGCGTGGCTGTGATGATAGGAA > 1:2109429/1‑35 TCAGATAATTCAAAGCGTGGCTGTGATGATAGGAA > 1:4431885/1‑35 TCAGATAATTCAAAGCGTGGCTGTGATGATAGGAA > 1:4228867/1‑35 TCAGATAATTCAAAGCGTGGCTGTGATGATAGGAA > 1:3499093/1‑35 CAGATAATTCAAAGCGTGGCTGTGATGATAGGAAT < 1:499972/35‑1 CAGATAATTCAAAGCGTGGCTGTGATGATAGGAAT < 1:3789439/35‑1 CAGATAATTCAAAGCGTGGCTGTGATGATAGGAAT < 1:684722/35‑1 AGATAATTCAAAGCGTGGCTGTGATGATAGGAATT < 1:1027277/35‑1 AGATAATTCAAAGCGTGGCTGTGATGATAGGAATT > 1:2296607/1‑35 AGATAATTCAAAGCGTGGCTGTGATGATAGGAATT < 1:2655770/35‑1 GATAATTCAAAGCGTGGCTGTGATGATAGGAATTA < 1:3071650/35‑1 GATAATTCAAAGCGTGGCTGTGATGATAGGAATTA < 1:5232949/35‑1 GATAATTCAAAGCGTGGCTGTGATGATAGGAATTA < 1:3472155/35‑1 GATAATTCAAAGCGTGGCTGTGATGATAGGAATTA < 1:3472221/35‑1 GATAATTCAAAGCGTGGCTGTGATGATAGGAATTA < 1:3472222/35‑1 GATAATTCAAAGCGTGGCTGTGATGATAGGAATTA < 1:6194133/35‑1 GATAATTCAAAGCGTGGCTGTGATGATAGGAATTA < 1:543449/35‑1 ATAATTCAAAGCGTGGCTGTGATGATAGGAATTAT < 1:7444659/35‑1 TAATTCAAAGCGTGGCTGTGATGATAGGAATTATG > 1:2525828/1‑35 TAATTCAAAGCGTGGCTGTGATGATAGGAATTATG > 1:720952/1‑35 TAATTCAAAGCGTGGCTGTGATGATAGGAATTATG > 1:4011341/1‑35 TAATTCAAAGCGTGGCTGTGATGATAGGAATTATG > 1:1842236/1‑35 AATTCAAAGCGTGGCTGTGATGATAGGAATTATGT < 1:4401517/35‑1 AATTCAAAGCGTGGCTGTGATGATAGGAATTATGT < 1:4670213/35‑1 ATTCAAAGCGTGGCTGTGATGATAGGAATTATGTT > 1:2873781/1‑35 TTCAAAGCGTGGCTGTGATGATAGGAATTATGTTT < 1:484903/35‑1 TTCAAAGCGTGGCTGTGATGATAGGAATTATGTTT < 1:4170254/35‑1 TTCAAAGCGTGGCTGTGATGATAGGAATTATGTTT < 1:4179727/35‑1 TTCAAAGCGTGGCTGTGATGATAGGAATTATGTTT < 1:2872815/35‑1 TTCAAAGCGTGGCTGTGATGATAGGAATTATGTTT < 1:3970626/35‑1 TCAAAGCGTGGCTGTGATGATAGGAATTATGTTTT < 1:6086735/35‑1 TCAAAGCGTGGCTGTGATGATAGGAATTATGTTTT < 1:4563477/35‑1 TCAAAGCGTGGCTGTGATGATAGGAATTATGTTTT > 1:6913812/1‑35 CAAAGCGTGGGTGTGATGATAGGAATTATGTTTTT < 1:6413468/35‑1 CAAAGCGTGGCTGTGATGATAGGAATTATGTTTTT > 1:7062281/1‑35 CAAAGCGTGGCTGTGATGATAGGAATTATGTTTTT > 1:972044/1‑35 CAAAGCGTGGCTGTGATGATAGGAATTATGTTTTT < 1:1390664/35‑1 CAAAGCGTGGCTGTGATGATAGGAATTATGTTTTT < 1:3377590/35‑1 CAAAGCGTGGCTGTGATGATAGGAATTATGTTTTT < 1:2362540/35‑1 AAAGCGTGGCTGTGATGATAGGAATTATGTTTTTT > 1:5377645/1‑35 AAAGCGTGGCTGTGATGATAGGAATTATGTTTTTT > 1:5629380/1‑35 AAAGCGTGGCTGTGATGATAGGAATTATGTTTTTT < 1:436814/35‑1 AAAGCGTGGCTGTGATGATAGGAATTATGTTTTTT > 1:3521376/1‑35 AAAGCGTGGCTGTGATGATAGGAATTATGTTTTTT < 1:2498296/35‑1 AAGCGTGGCTGTGATGATAGGAATTATGTTTTTTA < 1:5486904/35‑1 AAGCGTGGCTGTGATGATAGGAATTATGTTTTTTA < 1:7664555/35‑1 AAGCGTGGCTGTGATGATAGGAATTATGTTTTTTA > 1:1328035/1‑35 AAGCGTGGCTGTGATGATAGGAATTATGTTTTTTA < 1:2796061/35‑1 AAGCGTGGCTGTGATGATAGGAATTATGTTTTTTA < 1:698134/35‑1 AGCGTGGCTGTGATGATAGGAATTATGTTTTTTAC > 1:1088334/1‑35 AGCGTGGCTGTGATGATAGGAATTATGTTTTTTAC < 1:3803411/35‑1 AGCGTGGCTGTGATGATAGGAATTATGTTTTTTAC > 1:6169481/1‑35 AGCGTGGCTGTGATGATAGGAATTATGTTTTTTAC > 1:3982856/1‑35 AGCGTGGCTGTGATGATAGGAATTATGTTTTTTAC < 1:4769941/35‑1 TTCAGATAATTCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1223075‑1223089‑‑‑‑‑‑‑‑‑‑‑‑‑‑aGCGTGGCTGTGATGATAGGAATTATGTTTTTTAC > NC_000913/1223094‑1223127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |