| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 103 (1.420) | 45/68 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
Only 100 of 103 total aligned reads displayed.
GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066271‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT > NC_000913/2080592‑2080625 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG < 1:5396045/35‑1 TTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGC > 1:6604853/1‑35 TTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCA < 1:4567090/35‑1 TTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCA < 1:2009623/35‑1 TTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCA > 1:1322184/1‑35 TCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG > 1:1026606/1‑35 TCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG > 1:3770815/1‑35 TCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG > 1:2948346/1‑35 TCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG < 1:6376330/35‑1 TCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG > 1:145358/1‑35 TCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG < 1:6358724/35‑1 TCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG > 1:7151173/1‑35 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA < 1:4702605/35‑1 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA < 1:2279743/35‑1 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA < 1:7570795/35‑1 CGCCATTTAAGGCGTTATCCCCAGTTTGGAGAAAC < 1:3967608/35‑1 CGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAAC < 1:4366136/35‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT < 1:1096403/35‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT < 1:7208939/35‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT < 1:5211825/35‑1 CCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTC < 1:3828431/35‑1 ATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG < 1:6034193/35‑1 ATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG < 1:1159293/35‑1 ATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG < 1:3612401/35‑1 ATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG < 1:504736/35‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT < 1:184798/35‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT < 1:4005873/35‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT > 1:777356/1‑35 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT < 1:4652015/35‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT > 1:1193743/1‑35 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT < 1:1442050/35‑1 TTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTA > 1:708651/1‑35 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA > 1:5231692/1‑35 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA < 1:5301423/35‑1 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA < 1:4645667/35‑1 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA > 1:1796538/1‑35 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA < 1:2085736/35‑1 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA < 1:6659331/35‑1 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA < 1:4023339/35‑1 AAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:5320951/1‑35 AAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT < 1:7374445/35‑1 AAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:896274/1‑35 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG > 1:6421051/1‑35 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG > 1:7173813/1‑35 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG > 1:5240949/1‑35 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG > 1:1265343/1‑35 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG > 1:3034996/1‑35 GGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGA > 1:839492/1‑35 GGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGA > 1:6633211/1‑35 GGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGA < 1:7668158/35‑1 GCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAG < 1:267322/35‑1 GCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAG > 1:5953843/1‑35 GCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAG < 1:5815338/35‑1 GCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAG > 1:234342/1‑35 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGAT < 1:481006/35‑1 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGAT < 1:6226027/35‑1 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGAT < 1:7609119/35‑1 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATT > 1:2365172/1‑35 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATT > 1:7677311/1‑35 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATT > 1:60044/1‑35 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATT > 1:6185755/1‑35 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATT < 1:1958277/35‑1 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATT < 1:2614183/35‑1 TATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA < 1:1607213/35‑1 TATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA < 1:2155683/35‑1 TATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA < 1:4869051/35‑1 TATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA < 1:6093226/35‑1 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:4617501/1‑35 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA < 1:618583/35‑1 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA < 1:5822766/35‑1 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA < 1:7541986/35‑1 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAA < 1:5455347/35‑1 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAA > 1:1661532/1‑35 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAA > 1:5460978/1‑35 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAA > 1:7325539/1‑35 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAA > 1:7406791/1‑35 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAA < 1:7543274/35‑1 CCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAA > 1:4517716/1‑35 CCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAG < 1:2163212/35‑1 CCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAG > 1:5963048/1‑35 CCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAG > 1:530027/1‑35 CAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCG < 1:2431198/35‑1 AGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGC > 1:1936460/1‑35 AGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGC < 1:6905958/35‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT < 1:5312114/35‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT > 1:3941312/1‑35 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT < 1:7431665/35‑1 TTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTC > 1:1566432/1‑35 TTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTC < 1:4988057/35‑1 TTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCA < 1:5401928/35‑1 TTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCA < 1:1613772/35‑1 TTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCA < 1:1151648/35‑1 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT > 1:1096624/1‑35 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT < 1:429479/35‑1 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT < 1:4627551/35‑1 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT < 1:309469/35‑1 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT < 1:2750247/35‑1 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT > 1:2477725/1‑35 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT < 1:6936903/35‑1 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT > 1:2210744/1‑35 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066271‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT > NC_000913/2080592‑2080625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |