| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 71 [0] | [0] 70 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 69 (0.950) | 38/68 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
ATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601167‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTG > NC_000913/2614796‑2614828 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:3619837/1‑35ATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:6882530/1‑35ATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:6684753/1‑35 TGCAATGTTTCATATCATTTTCAAGGAGCCGACCG > 1:30256/1‑35 GCAATGTTTCATATCATTTTCAAGGAGCCGACCGA < 1:4023998/35‑1 CAATGTTTCATATCATTTTCAAGGAGCCGACCGAA > 1:1825134/1‑35 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAA < 1:3263223/35‑1 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAA < 1:4943898/35‑1 ATGTTTCATATCATTTTCAAGGAGCCGACCGAAAC > 1:21456/1‑35 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGT < 1:1983866/35‑1 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGT < 1:4420792/35‑1 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGT > 1:4906785/1‑35 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTT < 1:2500171/35‑1 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTT < 1:3628771/35‑1 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTT < 1:2799678/35‑1 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTT < 1:145290/35‑1 TCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:258750/35‑1 TCATATCATTTTCAAGGAGCCGACCGAAACAGTTC > 1:2559814/1‑35 TCATATCATTTTCAAGGAGCCGACCGAAACAGTTC > 1:7470292/1‑35 CATATTATTTTCAAGGAGCCGACCGAAACAGTTCG > 1:1498092/1‑35 CATATCATTTTCAAGGAGCCGACCGAGACAGTTCG > 1:781127/1‑35 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCG > 1:596675/1‑35 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGT > 1:1407976/1‑35 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGT > 1:606477/1‑35 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC > 1:6190184/1‑35 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC > 1:1805451/1‑35 ATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG > 1:3832740/1‑35 ATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG > 1:5507757/1‑35 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG > 1:5976207/1‑35 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG > 1:670447/1‑35 CATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGG > 1:2172744/1‑35 TTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT < 1:7773319/35‑1 TTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT > 1:6357858/1‑35 TTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT > 1:2665284/1‑35 TTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG < 1:5961492/35‑1 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGA > 1:4504735/1‑35 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGA > 1:4842999/1‑35 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGA > 1:4022957/1‑35 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAG < 1:2078925/35‑1 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAG > 1:5549832/1‑35 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA < 1:5681695/35‑1 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA > 1:6311820/1‑35 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA > 1:7551142/1‑35 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA > 1:6042019/1‑35 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA < 1:4496717/35‑1 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA > 1:4330664/1‑35 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA < 1:2837678/35‑1 AAGGAGCCGACCGAAACAGTTCGCCGGGCTGAAGA > 1:4208447/1‑35 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAc > 1:4216904/1‑34 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT < 1:5632337/35‑1 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT < 1:5220013/35‑1 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:650075/1‑35 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT < 1:6085176/35‑1 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:6161259/1‑35 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:6450218/1‑35 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:708330/1‑35 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATT < 1:7306317/35‑1 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATT > 1:3110220/1‑35 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA < 1:5177212/35‑1 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA < 1:5177173/35‑1 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:1753585/1‑35 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA < 1:1142490/35‑1 AGCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT < 1:5106875/35‑1 CCGACCGAAACAGTTCGTCGGGCTGAAGATTATTC < 1:2825663/35‑1 CCGACCGAAACAGTTCGTCGGGCTGAAGATTATTC > 1:2912613/1‑35 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT < 1:6280239/35‑1 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT > 1:2854108/1‑35 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT < 1:3567755/35‑1 ACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG < 1:1870617/35‑1 ATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601167‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTG > NC_000913/2614796‑2614828 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |