| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 71 [0] | [0] 70 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 69 (0.950) | 38/68 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
AATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGG > NC_000913/2601166‑2601233 | aaTGCAATGTTTCATATCATTTTCAAGGAGCCGAc < 1:7881269/35‑1 (MQ=255)aaTGCAATGTTTCATATCATTTTCAAGGAGCCGAc < 1:5751214/35‑1 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:3619837‑M1/1‑34 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:6684753‑M1/1‑34 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:6882530‑M1/1‑34 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcg > 1:30256‑M1/1‑33 (MQ=255) gCAATGTTTCATATCATTTTCAAGGAGCCGACcga < 1:4023998‑M1/35‑4 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaa > 1:1825134‑M1/1‑31 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaa < 1:3263223‑M1/35‑6 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaa < 1:4943898‑M1/35‑6 (MQ=255) aTGTTTCATATCATTTTCAAGGAGCCGACcgaaac > 1:21456‑M1/1‑29 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:4906785‑M1/1‑26 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagt < 1:4420792‑M1/35‑10 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagt < 1:1983866‑M1/35‑10 (MQ=255) ttCATATCATTTTCAAGGAGCCGACcgaaacagtt < 1:3628771‑M1/35‑11 (MQ=255) ttCATATCATTTTCAAGGAGCCGACcgaaacagtt < 1:2500171‑M1/35‑11 (MQ=255) ttCATATCATTTTCAAGGAGCCGACcgaaacagtt < 1:2799678‑M1/35‑11 (MQ=255) ttCATATCATTTTCAAGGAGCCGACcgaaacagtt < 1:145290‑M1/35‑11 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttc > 1:2559814‑M1/1‑24 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:258750‑M1/35‑12 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttc > 1:7470292‑M1/1‑24 (MQ=255) cATATTATTTTCAAGGAGCCGACcgaaacagttcg > 1:1498092‑M1/1‑23 (MQ=255) cATATCATTTTCAAGGAGCCGACcgagacagttcg > 1:781127‑M1/1‑23 (MQ=255) cATATCATTTTCAAGGAGCCGACcgaaacagttcg > 1:596675‑M1/1‑23 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgt > 1:606477‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgt > 1:1407976‑M1/1‑22 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtc > 1:1805451‑M1/1‑21 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtc > 1:6190184‑M1/1‑21 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcg > 1:3832740‑M1/1‑20 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcg > 1:5507757‑M1/1‑20 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgg > 1:670447‑M1/1‑19 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgg > 1:5976207‑M1/1‑19 (MQ=255) cATTTTCAAGGAGCCGACcgaaacagttcgtcggg > 1:2172744‑M1/1‑18 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggct < 1:7773319‑M1/35‑20 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggct > 1:6357858‑M1/1‑16 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggct > 1:2665284‑M1/1‑16 (MQ=255) tttCAAGGAGCCGACcgaaacagttcgtcgggctg < 1:5961492‑M1/35‑21 (MQ=255) ttCAAGGAGCCGACcgaaacagttcgtcgggctga > 1:4022957‑M1/1‑14 (MQ=255) ttCAAGGAGCCGACcgaaacagttcgtcgggctga > 1:4504735‑M1/1‑14 (MQ=255) ttCAAGGAGCCGACcgaaacagttcgtcgggctga > 1:4842999‑M1/1‑14 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaag > 1:5549832‑M1/1‑12 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:2078925‑M1/35‑24 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaaga > 1:4330664‑M1/1‑11 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaaga > 1:6311820‑M1/1‑11 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaaga > 1:6042019‑M1/1‑11 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaaga < 1:4496717‑M1/35‑25 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaaga < 1:5681695‑M1/35‑25 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaaga > 1:7551142‑M1/1‑11 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaaga < 1:2837678‑M1/35‑25 (MQ=255) aaGGAGCCGACcgaaacagttcgccgggctgaaga > 1:4208447‑M1/1‑11 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:650075‑M1/1‑10 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:6450218‑M1/1‑10 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:708330‑M1/1‑10 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:6161259‑M1/1‑10 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagat < 1:6085176‑M1/35‑26 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagat < 1:5220013‑M1/35‑26 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagat < 1:5632337‑M1/35‑26 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagac > 1:4216904‑M1/1‑10 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagatt < 1:7306317‑M1/35‑27 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagatt > 1:3110220‑M1/1‑9 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagatta < 1:5177212‑M1/35‑28 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagatta < 1:5177173‑M1/35‑28 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagatta > 1:1753585‑M1/1‑8 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagatta < 1:1142490‑M1/35‑28 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattat < 1:5106875‑M1/35‑29 (MQ=255) ccgaccgaaacagttcgtcgggctgaagattattc > 1:2912613‑M1/1‑5 (MQ=255) ccgaccgaaacagttcgtcgggctgaagattattc < 1:2825663‑M1/35‑31 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattct < 1:6280239‑M1/35‑32 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattct > 1:2854108‑M1/1‑4 (MQ=255) gaccgaaacagttcgtcgggctgaagattattctt < 1:3567755‑M1/35‑33 (MQ=255) accgaaacagttcgtcgggctgaagattattcttg < 1:1870617‑M1/35‑34 (MQ=255) | AATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGG > NC_000913/2601166‑2601233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |