| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 175 [0] | [0] 172 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 162 (2.380) | 52/64 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
Only 100 of 181 total aligned reads displayed.
CTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651257‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAA > NC_000913/3653715‑3653748 CTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:3851807/1‑35CTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:1328995/35‑1CTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:3244025/35‑1CTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:244981/35‑1CTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:7172159/35‑1 TTAGCATAAAACAAATGATGAATAAGGAATTTTAT > 1:1444573/1‑35 TTAGCATAAAACAAATGATGAATAAGGAATTTTAT > 1:3123473/1‑35 TTAGCATAAAACAAATGATGAATAAGGAATTTTAT > 1:4294894/1‑35 TAGCATAAAACAAATGATGAATAAGGAATTTTATA < 1:6953480/35‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATAT > 1:6090800/1‑35 GCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:4006023/35‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:613541/35‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:2403963/35‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:3081600/1‑35 TAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:2827467/35‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:251403/1‑35 TAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:797976/35‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:1477813/1‑35 AAACAAATGATGAATAAGGAATTTTATATTGATTA > 1:5197816/1‑35 AAACAAATGATGAATAAGGAATTTTATATTGATTA > 1:7206653/1‑35 AAACAAATGATGAATAAGGAATTTTATATTGATTA > 1:1933600/1‑35 AAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:2050466/35‑1 AACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:2370910/35‑1 AACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:5142570/35‑1 AACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:1714034/35‑1 AACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:4764390/35‑1 AACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:4903475/35‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:7256648/35‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:3672500/35‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:2156670/35‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTA > 1:727862/1‑35 CAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:1707484/35‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:1874466/35‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:7052008/35‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCAC > 1:2004227/1‑35 GATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:56010/35‑1 GATGAATAAGGAATTTTATATTGATTATTAGCACT > 1:6773435/1‑35 GATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:3379652/35‑1 GATGAATAAGGAATTTTATATTGATTATTAGCACT > 1:1133448/1‑35 ATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:6812759/35‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:2060172/35‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:7382270/35‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:1311318/35‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:1211339/35‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:4277344/35‑1 GAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:5783718/35‑1 GAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:531761/1‑35 GAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:42029/35‑1 GAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:746811/35‑1 GAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:2899996/35‑1 GAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:2899997/35‑1 GAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:339416/35‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:1056013/35‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTAT > 1:3606521/1‑35 AATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:2000929/35‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:1808012/35‑1 ATAAGGAATTTTATATTGATTATTAGCACTTTATA > 1:2986301/1‑35 ATAAGGAATTTTATATTGATTATTAGCACTTTATA > 1:3083440/1‑35 TAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:3916300/1‑35 TAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:5242202/1‑35 AAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:5387865/35‑1 AAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:6447025/35‑1 AAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:5387745/35‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:6627396/35‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATC > 1:594962/1‑35 GGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:6974297/35‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:35400/1‑35 GAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:2267312/35‑1 GAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:6531237/35‑1 GAATTTTATATTGATTATTAGCACTTTATAATCAT > 1:6515757/1‑35 GAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:7616048/35‑1 GAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:6355388/35‑1 GAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:6285539/35‑1 AATTTTATATTGATTATTAGCACTTTATAATCATT < 1:5900594/35‑1 AATTTTATATTGATTATTAGCACTTTATAATCATT < 1:986940/35‑1 AATTTTATATTGATTATTAGCACTTTATAATCATT < 1:1184782/35‑1 AATTTTATATTGATTATTAGCACTTTATAATCATT < 1:770355/35‑1 AATTTTATATTGATTATTAGCACTTTATAATCATT < 1:3769021/35‑1 AATTTTATATTGATTATTAGCACTTTATAATCATT < 1:3661029/35‑1 AATTTTATATTGATTATTAGCACTTTATAATCATT < 1:4597236/35‑1 AATTTTATATTGATTATTAGCACTTTATAATCATT < 1:7008863/35‑1 AATTTTATATTGATTATTAGCACTTTATAATCATT < 1:3474994/35‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTG > 1:7717737/1‑35 ATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:6472829/35‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:1692491/35‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:1893760/35‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGA > 1:2412472/1‑35 TTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:2492199/35‑1 TTATATTGATTATTAGCACTTTATAATCATTGAAT > 1:6247241/1‑35 TTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:7773635/35‑1 TTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:3441486/35‑1 TTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:2835128/35‑1 TATATTGATTATTAGCACTTTATAATCATTGAATA > 1:4304106/1‑35 TATATTGATTATTAGCACTTTATAATCATTGAATA > 1:7794724/1‑35 ATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:7094187/1‑35 ATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:5071205/35‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:2676870/1‑35 TATTGATTATTAGCACTTTATAATCATTGAATAAA > 1:1637490/1‑35 TATTGATTATTAGCACTTTATAATCATTGAATAAA > 1:5649649/1‑35 TATTGATTATTAGCACTTTATAATCATTGAATAAA < 1:5837883/35‑1 CTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651257‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAA > NC_000913/3653715‑3653748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |