| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3950464 = | 71 (0.980) | 17 (0.240) | 9/68 | 2.8 | 25.6% | intergenic (+44/‑43) | ilvL/ilvX | ilvXGMEDA operon leader peptide/uncharacterized protein IlvX |
| ? | NC_000913 | = 4631789 | 28 (0.390) | coding (1057/1938 nt) | slt | soluble lytic murein transglycosylase | |||||
CAAAAAAAACCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3950477‑3950464‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTGCCAGTAACGCCATTCATCTTTCTCTTTCG < NC_000913/4631789‑4631757 CAAAAAAACCCCCGCCTGCCAGTAACGCCATTCAT < 1:5457279/35‑1CAAAAAAAACCCCCCCTGCCAGTAACGCCATTCAT < 1:5557622/35‑1 AAAAATAAACCCCCCTGCCAGTAACGCCATTCATC < 1:184535/35‑1 AAAAAAAACCCCCCCTGCCAGTAACGCCATTCATC < 1:5529506/35‑1 cAAAAACACCCCCCTGCCAGTAACGCCATTCATCT < 1:7748630/34‑1 AAAAAACCCCCCCTGCCAGTAACGCCATTCATCTT < 1:6907900/35‑1 AAAAACCCCCCCTGCCAGTAACGCCATTCATCTTT < 1:7226863/35‑1 AAACCCCCCCCTGCCAGTAACGCCATTCATCTTTC < 1:2684545/35‑1 cCCCCCCCTGCCAGTAACGCCATTCATCTTTCTCT < 1:4381184/34‑1 cCCCCCCCTGCCAGTAACGCCATCCATCTTTCTCT < 1:5394456/34‑1 CCCCCCCTGCCAGTAACGCCATTCATCTTTCTCTT < 1:5644267/35‑1 CCCCCCCTGCCAGTAACGCCATTCATCTTTCTCTT < 1:7116817/35‑1 CCCCCCTGCCAGTAACGCCATTCATCTTTCTCTTT < 1:444287/35‑1 CCCCCCTGCCAGTAACGCCATTCATCTTTCTCTTT < 1:4191996/35‑1 CCCCCCTGCCAGTAACGCCATTCATCTTTCTCTTT < 1:6487079/35‑1 CCCCCTGCCAGTAACGCCATTCATCTTTCTCTTTC < 1:449134/35‑1 CCCCTGCCAGTAACGCCATTCATCTTTCTCTTTCG < 1:7557459/35‑1 CAAAAAAAACCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3950477‑3950464‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTGCCAGTAACGCCATTCATCTTTCTCTTTCG < NC_000913/4631789‑4631757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |