| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 72 [0] | [0] 73 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 70 (0.970) | 40/68 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGC > NC_000913/2204315‑2204383 | ccGATCCGGCGCAACGTCCCAATGGCCTGGATtat < 1:1879289/35‑1 (MQ=255)ccGATCCGGCGCAACGTCCCAATGGCCTGGATtat < 1:6538302/35‑1 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:3546483‑M1/1‑34 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:3489481‑M1/1‑34 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATt > 1:5764781‑M1/1‑34 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATt < 1:2551858‑M1/35‑2 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATt < 1:2292678‑M1/35‑2 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtga < 1:4243458‑M1/35‑4 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtga > 1:3679364‑M1/1‑32 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtga > 1:241348‑M1/1‑32 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtga < 1:6333650‑M1/35‑4 (MQ=255) tCCGGCGCAACGTCCCAATGGCCTGGATTATtgac < 1:7737059‑M1/35‑5 (MQ=255) ccGGCGCAACGTCCCAATGGCCTGGATTATtgacc < 1:2374797‑M1/35‑6 (MQ=255) ccGGCGCAACGTCCCAATGGCCTGGATTATtgacc < 1:5496712‑M1/35‑6 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccg < 1:1946583‑M1/35‑7 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccg < 1:1946547‑M1/35‑7 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccg < 1:7532087‑M1/35‑7 (MQ=255) gcgcAACGTCCCAATGGCCTGGATTATtgaccgaa < 1:5566840‑M1/35‑9 (MQ=255) gcgcAACGTCCCAATGGCCTGGATTATtgaccgaa < 1:6575030‑M1/35‑9 (MQ=255) gcgcAACGTCCCAATGGCCTGGATTATtgaccgaa < 1:2437463‑M1/35‑9 (MQ=255) gcAACGTCCCAATGGCCTGGATTATtgaccgaatg < 1:5012894‑M1/35‑11 (MQ=255) cAACGTCCCAATGGCCTGGATTATtgaccgaatgc > 1:215869‑M1/1‑24 (MQ=255) cAACGTCCCAATGGCCTGGATTATtgaccgaatgc > 1:1476639‑M1/1‑24 (MQ=255) aaCGTCCCAATGGCCTGGATTATtgaccgaatgcg < 1:6298964‑M1/35‑13 (MQ=255) aaCGTCCCAATGGCCTGGATTATtgaccgaatgcg < 1:727185‑M1/35‑13 (MQ=255) aCGTCCCAATGGCCTGGATTATtgaccgaatgcgg > 1:1175632‑M1/1‑22 (MQ=255) aCGTCCCAATGGCCTGGATTATtgaccgaatgcgg > 1:1216167‑M1/1‑22 (MQ=255) aCGTCCCAATGGCCTGGATTATtgaccgaatgcgg > 1:522822‑M1/1‑22 (MQ=255) cGTCCCAATGGCCTGGATTATtgaccgaatgcgga < 1:6206806‑M1/35‑15 (MQ=255) gTCCCAATGGCCTGGATTATtgaccgaatgcggac < 1:3458103‑M1/35‑16 (MQ=255) gTCCCAATGGCCTGGATTATtgaccgaatgcggac < 1:1466744‑M1/35‑16 (MQ=255) gTCCCAATGGCCTGGATTATtgaccgaatgcggac < 1:5258380‑M1/35‑16 (MQ=255) tCCCAATGGCCTGGATTATtgaccgaatgcggacc > 1:4462214‑M1/1‑19 (MQ=255) tCCCAATGGCCTGGATTATtgaccgaatgcggacc < 1:4184370‑M1/35‑17 (MQ=255) tCCCAATGGCCTGGATTATtgaccgaatgcggacc > 1:1607386‑M1/1‑19 (MQ=255) cccAATGGCCTGGATTATtgaccgaatgcggacca < 1:1208184‑M1/35‑18 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccac < 1:7775110‑M1/35‑19 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccac > 1:120530‑M1/1‑17 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccac > 1:3955295‑M1/1‑17 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacat < 1:7001638‑M1/35‑21 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacat > 1:4733372‑M1/1‑15 (MQ=255) aTGGCCTGGATTATtgaccgaatgcggaccacatt < 1:2043295‑M1/35‑22 (MQ=255) aTGGCCTGGATTATtgaccgaatgcggaccacatt > 1:2092232‑M1/1‑14 (MQ=255) gCCTGGATTATtgaccgaatgcggaccacattcac > 1:715481‑M1/1‑11 (MQ=255) gCCTGGATTATtgaccgaatgcggaccacattcac > 1:3454482‑M1/1‑11 (MQ=255) ccTGGATTATtgaccgaatgcggaccacattcaca < 1:3483210‑M1/35‑26 (MQ=255) cTGGATTATtgaccgaatgcggaccacattcacat < 1:663027‑M1/35‑27 (MQ=255) cTGGATTATtgaccgaatgcggaccacattcacat < 1:7311115‑M1/35‑27 (MQ=255) cTGGATTATtgaccgaatgcggaccacattcacat > 1:2829230‑M1/1‑9 (MQ=255) tGGATTATtgaccgaatgcggaccacattcacatc < 1:4639329‑M1/35‑28 (MQ=255) ggATTATtgaccgaatgcggaccacattcacatca < 1:2433008‑M1/35‑29 (MQ=255) ggATTATtgaccgaatgcggaccacattcacatca < 1:4384433‑M1/35‑29 (MQ=255) ggATTATtgaccgaatgcggaccacattcacatca < 1:3377978‑M1/35‑29 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcat > 1:5158895‑M1/1‑6 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcat > 1:7489831‑M1/1‑6 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcat < 1:1763813‑M1/35‑30 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcat > 1:7536411‑M1/1‑6 (MQ=255) attattgaccgaatgcggaccacattcacatcatt > 1:6169894‑M1/1‑5 (MQ=255) attattgaccgaatgcggaccacattcacatcatt < 1:6194978‑M1/35‑31 (MQ=255) ttattgaccgaatgcggaccacattcacatcattt < 1:3143767‑M1/35‑32 (MQ=255) ttattgaccgaatgcggaccacattcacatcattt > 1:6491374‑M1/1‑4 (MQ=255) ttattgaccgaatgcggaccacattcacatcattt > 1:1587490‑M1/1‑4 (MQ=255) tattgaccgaatgcggaccacattcacatcatttc > 1:5097825‑M1/1‑3 (MQ=255) attgaccgaatgcggaccacattcacatcatttct > 1:1000175‑M1/1‑2 (MQ=255) attgaccgaatgcggaccacattcacatcatttct > 1:7263389‑M1/1‑2 (MQ=255) attgaccgaatgcggaccacattcacatcatttct > 1:638163‑M1/1‑2 (MQ=255) attgaccgaatgcggaccacattcacatcatttct < 1:2123665‑M1/35‑34 (MQ=255) attgaccgaatgcggaccacattcacatcatttct > 1:550444‑M1/1‑2 (MQ=255) attgaccgaatgcggaccacattcacatcatttct < 1:4278037‑M1/35‑34 (MQ=255) ttgaccgaatgcggaccacattcacatcatttctt < 1:2430355‑M1/35‑35 (MQ=255) ttgaccgaatgcggaccacattcacatcatttctt > 1:4030818‑M1/1‑1 (MQ=255) ttgaccgaatgcggaccacattcacatcatttctt > 1:4218287‑M1/1‑1 (MQ=255) | CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGC > NC_000913/2204315‑2204383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |