| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,400,289 | Δ7 bp | coding (2‑8/309 nt) | hfq → | RNA‑binding protein Hfq |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4400288 | 1 (0.010) | 92 (1.350) | 45/64 | 0.0 | 99.0% | coding (1/309 nt) | hfq | RNA‑binding protein Hfq |
| ? | NC_000913 | 4400296 = | 1 (0.010) | coding (9/309 nt) | hfq | RNA‑binding protein Hfq | |||||
CAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCC > NC_000913/4400254‑4400321 | cAAAGTACAAATAAGCATATAAGGAAAAGAGAGAA > 1:6052577‑M1/1‑35 (MQ=255)cAAAGTACAAATAAGCATATAAGGAAAAGAGAGAA > 1:4131585‑M1/1‑35 (MQ=255) aaaGTACAAATAAGCATATAAGGAAAAGAGAGAAg > 1:6065720‑M1/1‑34 (MQ=255) aaaGTACAAATAAGCATATAAGGAAAAGAGAGAAg > 1:5798420‑M1/1‑34 (MQ=255) aaaGTACAAATAAGCATATAAGGAAAAGAGAGAAg > 1:7678519‑M1/1‑34 (MQ=255) aaGTACAAATAAGCATATAAGGAAAAGAGAGAAgg > 1:611600‑M1/1‑33 (MQ=255) aaGTACAAATAAGCATATAAGGAAAAGAGAGAAgg > 1:3082850‑M1/1‑33 (MQ=255) aGTACAAATAAGCATATAAGGAAAAGAGAGAAggg > 1:4455807‑M1/1‑32 (MQ=255) aGTACAAATAAGCATATAAGGAAAAGAGAGAAggg > 1:5740188‑M1/1‑32 (MQ=255) gTACAAATAAGCATATAAGGAAAAGAGAGAAgggg > 1:4791862‑M1/1‑31 (MQ=255) tACAAATAAGCATATAAGGAAAAGAGAGAAggggc > 1:1665598‑M1/1‑30 (MQ=255) tACAAATAAGCATATAAGGAAAAGAGAGAAggggc < 1:76488‑M1/35‑6 (MQ=255) tACAAATAAGCATATAAGGAAAAGAGAGAAggggc < 1:7620168‑M1/35‑6 (MQ=255) tACAAATAAGCATATAAGGAAAAGAGAGAAggggc > 1:4915839‑M1/1‑30 (MQ=255) tACAAATAAGCATATAAGGAAAAGAGAGAAggggc > 1:635290‑M1/1‑30 (MQ=255) aCAAATAAGCATATAAGGAAAAGAGAGAAggggca < 1:7728317‑M1/35‑7 (MQ=255) cAAATAAGCATATAAGGAAAAGAGAGAAggggcaa < 1:5150322‑M1/35‑8 (MQ=255) cAAATAAGCATATAAGGAAAAGAGAGAAggggcaa > 1:4069787‑M1/1‑28 (MQ=255) cAAATAAGCATATAAGGAAAAGAGAGAAggggcaa > 1:4185037‑M1/1‑28 (MQ=255) cAAATAAGCATATAAGGAAAAGAGAGAAggggcaa < 1:4230038‑M1/35‑8 (MQ=255) aaaTAAGCATATAAGGAAAAGAGAGAAggggcaat < 1:1989553‑M1/35‑9 (MQ=255) aaaTAAGCATATAAGGAAAAGAGAGAAggggcaat < 1:6621646‑M1/35‑9 (MQ=255) aaTAAGCATATAAGGAAAAGAGAGAAggggcaatc < 1:2933936‑M1/35‑10 (MQ=255) aaTAAGCATATAAGGAAAAGAGAGAAggggcaatc < 1:4188361‑M1/35‑10 (MQ=255) aaTAAGCATATAAGGAAAAGAGAGAAggggcaatc < 1:1160428‑M1/35‑10 (MQ=255) aaTAAGCATATAAGGAAAAGAGAGAAggggcaatc > 1:6411358‑M1/1‑26 (MQ=255) aaTAAGCATATAAGGAAAAGAGAGAAggggcaatc > 1:6135693‑M1/1‑26 (MQ=255) aTAAGCATATAAGGAAAAGAGAGAAggggcaatct < 1:833061‑M1/35‑11 (MQ=255) aTAAGCATATAAGGAAAAGAGAGAAggggcaatct > 1:1644922‑M1/1‑25 (MQ=255) aTAAGCATATAAGGAAAAGAGAGAAggggcaatct > 1:362454‑M1/1‑25 (MQ=255) aTAAGCATATAAGGAAAAGAGAGAAggggcaatct > 1:4852386‑M1/1‑25 (MQ=255) tAAGCATATAAGGAAAAGAGAGAAggggcaatctt < 1:7598440‑M1/35‑12 (MQ=255) tAAGCATATAAGGAAAAGAGAGAAggggcaatctt > 1:4714727‑M1/1‑24 (MQ=255) tAAGCATATAAGGAAAAGAGAGAAggggcaatctt > 1:1430207‑M1/1‑24 (MQ=255) tAAGCATATAAGGAAAAGAGAGAAggggcaatctt > 1:160655‑M1/1‑24 (MQ=255) tAAGCATATAAGGAAAAGAGAGAAggggcaatctt < 1:4110701‑M1/35‑12 (MQ=255) tAAGCATATAAGGAAAAGAGAGAAggggcaatctt > 1:2436574‑M1/1‑24 (MQ=255) aaGCATATAAGGAAAAGAGAGAAggggcaatcttt < 1:1648324‑M1/35‑13 (MQ=255) aaGCATATAAGGAAAAGAGAGAAggggcaatcttt > 1:7412165‑M1/1‑23 (MQ=255) aaGCATATAAGGAAAAGAGAGAAggggcaatcttt > 1:5652314‑M1/1‑23 (MQ=255) aaGCATATAAGGAAAAGAGAGAAggggcaatcttt < 1:7066159‑M1/35‑13 (MQ=255) aGCATATAAGGAAAAGAGAGAAggggcaatcttta > 1:7121086‑M1/1‑22 (MQ=255) aGCATATAAGGAAAAGAGAGAAggggcaatcttta > 1:947290‑M1/1‑22 (MQ=255) aGCATATAAGGAAAAGAGAGAAggggcaatcttta > 1:4657907‑M1/1‑22 (MQ=255) aGCATATAAGGAAAAGAGAGAAggggcaatcttta > 1:1189419‑M1/1‑22 (MQ=255) aGCATATAAGGAAAAGAGAGAAggggcaatcttta < 1:2562614‑M1/35‑14 (MQ=255) aGCATATAAGGAAAAGAGAGAAggggcaatcttta > 1:1867279‑M1/1‑22 (MQ=255) aGCATATAAGGAAAAGAGAGAAggggcaatcttta > 1:2291352‑M1/1‑22 (MQ=255) gCATATAAGGAAAAGAGAGAAggggcaatctttac < 1:855785‑M1/35‑15 (MQ=255) gCATATAAGGAAAAGAGAGAAggggcaatctttac > 1:687092‑M1/1‑21 (MQ=255) gCATATAAGGAAAAGAGAGAAggggcaatctttac < 1:2221835‑M1/35‑15 (MQ=255) cATATAAGGAAAAGAGAGAAggggcaatctttaca > 1:74275‑M1/1‑20 (MQ=255) atatAAGGAAAAGAGAGAAggggcaatctttacaa < 1:4543617‑M1/35‑17 (MQ=255) atatAAGGAAAAGAGAGAAggggcaatctttacaa > 1:2760355‑M1/1‑19 (MQ=255) atatAAGGAAAAGAGAGAAggggcaatctttacaa > 1:2391912‑M1/1‑19 (MQ=255) atatAAGGAAAAGAGAGAAggggcaatctttacaa < 1:5179570‑M1/35‑17 (MQ=255) atatAAGGAAAAGAGAGAAggggcaatctttacaa < 1:7197360‑M1/35‑17 (MQ=255) tataAGGAAAAGAGAGAAggggcaatctttacaag < 1:213325‑M1/35‑18 (MQ=255) tataAGGAAAAGAGAGAAggggcaatctttacaag > 1:6475101‑M1/1‑18 (MQ=255) tataAGGAAAAGAGAGAAggggcaatctttacaag > 1:1389536‑M1/1‑18 (MQ=255) tataAGGAAAAGAGAGAAggggcaatctttacaag > 1:2656376‑M1/1‑18 (MQ=255) ataAGGAAAAGAGAGAAggggcaatctttacaaga < 1:7646504‑M1/35‑19 (MQ=255) ataAGGAAAAGAGAGAAggggcaatctttacaaga > 1:4530341‑M1/1‑17 (MQ=255) ataAGGAAAAGAGAGAATGGCTAAGGGGCAATCtt < 1:6400996/35‑1 (MQ=255) taAGGAAAAGAGAGAAggggcaatctttacaagat > 1:7299442‑M1/1‑16 (MQ=255) taAGGAAAAGAGAGAAggggcaatctttacaagat > 1:6487169‑M1/1‑16 (MQ=255) taAGGAAAAGAGAGAAggggcaatctttacaagat > 1:7107150‑M1/1‑16 (MQ=255) aaGGAAAAGAGAGAAggggcaatctttacaagatc > 1:6293014‑M1/1‑15 (MQ=255) aaGGAAAAGAGAGAAggggcaatctttacaagatc < 1:7116214‑M1/35‑21 (MQ=255) aGGAAAAGAGAGAAggggcaatctttacaagatcc > 1:2220790‑M1/1‑14 (MQ=255) aGGAAAAGAGAGAAggggcaatctttacaagatcc > 1:325349‑M1/1‑14 (MQ=255) aGGAAAAGAGAGAAggggcaatctttacaagatcc > 1:3280517‑M1/1‑14 (MQ=255) ggAAAAGAGAGAAggggcaatctttacaagatccg > 1:4815081‑M1/1‑13 (MQ=255) ggAAAAGAGAGAAggggcaatctttacaagatccg < 1:3790408‑M1/35‑23 (MQ=255) ggAAAAGAGAGAAggggcaatctttacaagatccg < 1:1884727‑M1/35‑23 (MQ=255) ggAAAAGAGAGAAggggcaatctttacaagatccg < 1:2501470‑M1/35‑23 (MQ=255) aaaaGAGAGAAggggcaatctttacaagatccgtt > 1:3328611‑M1/1‑11 (MQ=255) aaaGAGAGAAggggcaatctttacaagatccgttc > 1:3256300‑M1/1‑10 (MQ=255) aaaGAGAGAAggggcaatctttacaagatccgttc > 1:6287766‑M1/1‑10 (MQ=255) aaaGAGAGAAggggcaatctttacaagatccgttc > 1:2008692‑M1/1‑10 (MQ=255) aaGAGAGAAggggcaatctttacaagatccgttcc < 1:4909262‑M1/35‑27 (MQ=255) gagagaAggggcaatctttacaagatccgttcctg < 1:1034502‑M1/35‑29 (MQ=255) gagagaAggggcaatctttacaagatccgttcctg > 1:6601228‑M1/1‑7 (MQ=255) gagagaAggggcaatctttacaagatccgttcctg < 1:729954‑M1/35‑29 (MQ=255) gagagaAggggcaatctttacaagatccgttcctg < 1:2820633‑M1/35‑29 (MQ=255) gagagaAggggcaatctttacaagatccgttcctg > 1:4932146‑M1/1‑7 (MQ=255) gagagaAggggcaatctttacaagatccgttcctg < 1:7611576‑M1/35‑29 (MQ=255) agagaAggggcaatctttacaagatccgttcctga > 1:7103950‑M1/1‑6 (MQ=255) agagaAggggcaatctttacaagatccgttcctga > 1:5729134‑M1/1‑6 (MQ=255) agagaAggggcaatctttacaagatccgttcctga < 1:5411070‑M1/35‑30 (MQ=255) gagaAggggcaatctttacaagatccgttcctgaa < 1:4017509‑M1/35‑31 (MQ=255) gagaAggggcaatctttacaagatccgttcctgaa > 1:5411649‑M1/1‑5 (MQ=255) gagaAggggcaatctttacaagatccgttcctgaa > 1:4468562‑M1/1‑5 (MQ=255) gaAggggcaatctttacaagatccgttcctgaacg > 1:7187557‑M1/1‑3 (MQ=255) gaAggggcaatctttacaagatccgttcctgaacg > 1:2725852‑M1/1‑3 (MQ=255) aaggggcaatctttacaagatccgttcctgaacgc > 1:738267‑M1/1‑2 (MQ=255) aaggggcaatctttacaagatccgttcctgaacgc > 1:2705057‑M1/1‑2 (MQ=255) | CAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCC > NC_000913/4400254‑4400321 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |