| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 96 [0] | [0] 94 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 90 (1.240) | 37/68 | 0.0 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
CTGTTGCCGATTTTTCATCCAATGATGCTTTCACCAGGCGGCACTAACCCGGACGTAGACTGTATTACA > NC_000913/2517916‑2517984 | actaagtatctgaccccgcataaggaatagaacac > 1:1149019‑M2/35‑35 (MQ=255)actaagtatctgaccccgcataaggaatagaacac > 1:4942773‑M2/35‑35 (MQ=255)actaagtatctgaccccgcataaggaatagaacac > 1:5213927‑M2/35‑35 (MQ=255)actaagtatctgaccccgcataaggaatagaacac > 1:5237509‑M2/35‑35 (MQ=255) ctaagtatctgaccccgcataaggaatagaacaca > 1:460700‑M2/34‑35 (MQ=255) taagtatctgaccccgcataaggaatagaacaCAg > 1:565227‑M2/33‑35 (MQ=255) taagtatctgaccccgcataaggaatagaacaCAg > 1:587740‑M2/33‑35 (MQ=255) aagtatctgaccccgcataaggaatagaacaCAgg < 1:7391600‑M2/4‑1 (MQ=255) aagtatctgaccccgcataaggaatagaacaCAgg > 1:2310328‑M2/32‑35 (MQ=255) agtatctgaccccgcataaggaatagaacaCAggc > 1:7813574‑M2/31‑35 (MQ=255) agtatctgaccccgcataaggaatagaacaCAggc > 1:5722150‑M2/31‑35 (MQ=255) tatctgaccccgcataaggaatagaacaCAggcgg < 1:3367406‑M2/7‑1 (MQ=255) tatctgaccccgcataaggaatagaacaCAggcgg > 1:3681605‑M2/29‑35 (MQ=255) tatctgaccccgcataaggaatagaacaCAggcgg > 1:481761‑M2/29‑35 (MQ=255) tatctgaccccgcataaggaatagaacaCAggcgg > 1:6330066‑M2/29‑35 (MQ=255) tctgaccccgcataaggaatagaacaCAGGCGGCa > 1:7499754‑M2/27‑35 (MQ=255) tctgaccccgcataaggaatagaacaCAGGCGGCa > 1:826166‑M2/27‑35 (MQ=255) tctgaccccgcataaggaatagaacaCAGGCGGCa > 1:1126390‑M2/27‑35 (MQ=255) tctgaccccgcataaggaatagaacaCAGGCGGCa > 1:4498841‑M2/27‑35 (MQ=255) tctgaccccgcataaggaatagaacaCAGGCGGCa > 1:421483‑M2/27‑35 (MQ=255) tctgaccccgcataaggaatagaacaCAGGCGGCa > 1:971029‑M2/27‑35 (MQ=255) ctgaccccgcataaggaatagaacaCAGGCGGCAc < 1:6596596‑M2/10‑1 (MQ=255) ctgaccccgcataaggaatagaacaCAGGCGGCAc < 1:4471798‑M2/10‑1 (MQ=255) tgaccccgcataaggaatagaacaCAGGCGGCACt > 1:2611497‑M2/25‑35 (MQ=255) tgaccccgcataaggaatagaacaCAGGCGGCACt < 1:3162336‑M2/11‑1 (MQ=255) gaccccgcataaggaatagaacaCAGGCGGCACTa < 1:889224‑M2/12‑1 (MQ=255) gaccccgcataaggaatagaacaCAGGCGGCACTa < 1:513542‑M2/12‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTaa > 1:2244992‑M2/23‑35 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTaa > 1:4825716‑M2/23‑35 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTaa > 1:7002718‑M2/23‑35 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTaa > 1:758374‑M2/23‑35 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTaa > 1:4159565‑M2/23‑35 (MQ=255) cccgcataaggaatagaacaCAGGCGGCACTAAcc < 1:5323114‑M2/15‑1 (MQ=255) cccgcataaggaatagaacaCAGGCGGCACTAAcc < 1:5955452‑M2/15‑1 (MQ=255) cccgcataaggaatagaacaCAGGCGGCACTAAcc < 1:6046467‑M2/15‑1 (MQ=255) cccgcataaggaatagaacaCAGGCGGCACTAAcc < 1:1875888‑M2/15‑1 (MQ=255) cccgcataaggaatagaacaCAGGCGGCACTAAcc < 1:1110729‑M2/15‑1 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCg > 1:3864667‑M2/19‑35 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCg > 1:6550042‑M2/19‑35 (MQ=255) gcataaggaatagaacaCAGGCGGCACTAACCCgg > 1:1508613‑M2/18‑35 (MQ=255) ataaggaatagaacaCAGGCGGCACTAACCCGGAc > 1:3307685‑M2/16‑35 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:1913655‑M2/15‑35 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:6642719‑M2/15‑35 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACg < 1:598717‑M2/21‑1 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:813048‑M2/15‑35 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:5352409‑M2/15‑35 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:576438‑M2/15‑35 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTa > 1:840490‑M2/13‑35 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTa > 1:769985‑M2/13‑35 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTa > 1:6570115‑M2/13‑35 (MQ=255) ggaatagaacaCAGGCGGCACTAACCCGGACGTAg > 1:1145819‑M2/12‑35 (MQ=255) ggaatagaacaCAGGCGGCACTAACCCGGACGTAg > 1:5705972‑M2/12‑35 (MQ=255) ggaatagaacaCAGGCGGCACTAACCCGGACGTAg > 1:488503‑M2/12‑35 (MQ=255) gaatagaacaCAGGCGGCACTAACCCGGACGTAGa < 1:5956015‑M2/25‑1 (MQ=255) aatagaacaCAGGCGGCACTAACCCGGACGTAGAc < 1:6327931‑M2/26‑1 (MQ=255) aatagaacaCAGGCGGCACTAACCCGGACGTAGAc > 1:6021996‑M2/10‑35 (MQ=255) atagaacaCAGGCGGCACTAACCCGGACGTAGACt > 1:4096594‑M2/9‑35 (MQ=255) atagaacaCAGGCGGCACTAACCCGGACGTAGACt > 1:3353873‑M2/9‑35 (MQ=255) tagaacaCAGGCGGCACTAACCCGGACGTAGACTg > 1:6463985‑M2/8‑35 (MQ=255) tagaacaCAGGCGGCACTAACCCGGACGTAGACTg < 1:3407677‑M2/28‑1 (MQ=255) tagaacaCAGGCGGCACTAACCCGGACGTAGACTg > 1:3436114‑M2/8‑35 (MQ=255) tagaacaCAGGCGGCACTAACCCGGACGTAGACTg > 1:1008186‑M2/8‑35 (MQ=255) gaacaCAGGCGGCACTAACCCGGACGTAGACTGTa > 1:2103016‑M2/6‑35 (MQ=255) gaacaCAGGCGGCACTAACCCGGACGTAGACTGTa > 1:3131102‑M2/6‑35 (MQ=255) gaacaCAGGCGGCACTAACCCGGACGTAGACTGTa > 1:4828482‑M2/6‑35 (MQ=255) gaacaCAGGCGGCACTAACCCGGACGTAGACTGTa > 1:3092049‑M2/6‑35 (MQ=255) gaacaCAGGCGGCACTAACCCGGACGTAGACTGTa < 1:2852103‑M2/30‑1 (MQ=255) gaacaCAGGCGGCACTAACCCGGACGTAGACTGTa < 1:1965367‑M2/30‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:3098837‑M2/31‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 1:2405559‑M2/5‑35 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:802071‑M2/31‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:784550‑M2/31‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:676132‑M2/31‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:6084758‑M2/31‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 1:5672884‑M2/5‑35 (MQ=255) acaCAGGCGGCACTAACCCGGACGTAGACTGTAtt > 1:4934082‑M2/4‑35 (MQ=255) acaCAGGCGGCACTAACCCGGACGTAGACTGTAtt > 1:5387252‑M2/4‑35 (MQ=255) acaCAGGCGGCACTAACCCGGACGTAGACTGTAtt > 1:2045890‑M2/4‑35 (MQ=255) acaCAGGCGGCACTAACCCGGACGTAGACTGTAtt < 1:2429911‑M2/32‑1 (MQ=255) acaCAGGCGGCACTAACCCGGACGTAGACTGTAtt < 1:344874‑M2/32‑1 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTa > 1:5215818‑M2/3‑35 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTa < 1:710428‑M2/33‑1 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTa > 1:2553500‑M2/3‑35 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTa < 1:4040510‑M2/33‑1 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTa < 1:5251470‑M2/33‑1 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTa < 1:7719232‑M2/33‑1 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTa < 1:7776464‑M2/33‑1 (MQ=255) aCAGGCGGCACTAACCCGGACGTAGACTGTATTAc < 1:5153878‑M2/34‑1 (MQ=255) aCAGGCGGCACTAACCCGGACGTAGACTGTATTAc < 1:2809089‑M2/34‑1 (MQ=255) aCAGGCGGCACTAACCCGGACGTAGACTGTATTAc < 1:4673714‑M2/34‑1 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACa < 1:1282742/35‑1 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACa > 1:2372701/1‑35 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACa < 1:6948699/35‑1 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACa < 1:655337/35‑1 (MQ=255) | CTGTTGCCGATTTTTCATCCAATGATGCTTTCACCAGGCGGCACTAACCCGGACGTAGACTGTATTACA > NC_000913/2517916‑2517984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |