| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,362,162 | Δ5,481 bp | [yhcA]–[yhcF] | [yhcA], yhcD, yhcE, insH‑10, yhcE, [yhcF] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3362162 | 3367642 | 5481 | 136 [0] | [0] 135 | [yhcA]–[yhcF] | [yhcA],yhcD,yhcE,insH‑10,yhcE,[yhcF] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3362161 | 0 (0.000) | 128 (1.770) | 44/68 | 0.0 | 100% | coding (50/675 nt) | yhcA | putative fimbrial chaperone YhcA |
| ? | NC_000913 | 3367643 = | 0 (0.000) | intergenic (+1/‑184) | yhcF/yhcG | DUF1120 domain‑containing protein YhcF/DUF1016 domain‑containing protein YhcG | |||||
Only 100 of 135 total aligned reads displayed.
TGGGAAAGCTGTGATAAGCGTAGTCTACTTGTGATAACAATGCCGGACAGGAGTACTATCAGGCATTCG > NC_000913/3367609‑3367677 | cattcactgtatttataacaacatcaatgaatact < 1:2265581‑M2/1‑1 (MQ=255)cattcactgtatttataacaacatcaatgaatact < 1:2275862‑M2/1‑1 (MQ=255)cattcactgtatttataacaacatcaatgaatact < 1:5275974‑M2/1‑1 (MQ=255)cattcactgtatttataacaacatcaatgaatact > 1:6665817‑M2/35‑35 (MQ=255)cattcactgtatttataacaacatcaatgaatact < 1:7138491‑M2/1‑1 (MQ=255)cattcactgtatttataacaacatcaatgaatact < 1:1236590‑M2/1‑1 (MQ=255)cattcactgtatttataacaacatcaatgaatact < 1:3294598‑M2/1‑1 (MQ=255)cattcactgtatttataacaacatcaatgaatact < 1:3055063‑M2/1‑1 (MQ=255) attcactgtatttataacgacatcaatgaatacTa < 1:550990‑M2/2‑1 (MQ=255) ttcactgtatttataacaacatcaatgaatacTaa < 1:4881069‑M2/3‑1 (MQ=255) ttcactgtatttataacaacatcaatgaatacTaa < 1:235111‑M2/3‑1 (MQ=255) ttcactgtatttataacaacatcaatgaatacTaa < 1:1572909‑M2/3‑1 (MQ=255) ttcactgtatttataacaacatcaatgaatacTaa < 1:4363353‑M2/3‑1 (MQ=255) ttcactgtatttataacaacatcaatgaatacTaa < 1:4640239‑M2/3‑1 (MQ=255) tcactgtatttataacaacatcaatgaatacTAAc < 1:3408661‑M2/4‑1 (MQ=255) tcactgtatttataacaacatcaatgaatacTAAc < 1:5487222‑M2/4‑1 (MQ=255) tcactgtatttataacaacatcaatgaatacTAAc < 1:1061415‑M2/4‑1 (MQ=255) tcactgtatttataacaacatcaatgaatacTAAc < 1:1061449‑M2/4‑1 (MQ=255) tcactgtatttataacaacatcaatgaatacTAAc < 1:1518667‑M2/4‑1 (MQ=255) cactgtatttataacaacatcaatgaatacTAACa > 1:920750‑M2/31‑35 (MQ=255) actgtatttataacaacatcaatgaatacTAACaa < 1:331728‑M2/6‑1 (MQ=255) ctgtatttataacaacatcaatgaatacTAACAAt < 1:5258977‑M2/7‑1 (MQ=255) tgtatttataacaacatcaatgaatacTAACAATg < 1:1456688‑M2/8‑1 (MQ=255) tgtatttataacaacatcaatgaatacTAACAATg < 1:3376512‑M2/8‑1 (MQ=255) gtatttataacaacatcaatgaatacTAACAATGc > 1:3713631‑M2/27‑35 (MQ=255) gtatttataacaacatcaatgaatacTAACAATGc > 1:273869‑M2/27‑35 (MQ=255) tatttataacaacatcaatgaatacTAACAATGcc > 1:6217374‑M2/26‑35 (MQ=255) atttataacaacatcaatgaatacTAACAATGCCg > 1:2672706‑M2/25‑35 (MQ=255) atttataacaacatcaatgaatacTAACAATGCCg < 1:1069717‑M2/11‑1 (MQ=255) atttataacaacatcaatgaatacTAACAATGCCg < 1:3352867‑M2/11‑1 (MQ=255) atttataacaacatcaatgaatacTAACAATGCCg < 1:1844489‑M2/11‑1 (MQ=255) atttataacaacatcaatgaatacTAACAATGCCg < 1:1164587‑M2/11‑1 (MQ=255) tttataacaacatcaatgaatacTAACAATGCCgg > 1:6212861‑M2/24‑35 (MQ=255) ttataacaacatcaatgaatacTAACAATGCCGGa > 1:7098729‑M2/23‑35 (MQ=255) ttataacaacatcaatgaatacTAACAATGCCGGa > 1:4745326‑M2/23‑35 (MQ=255) tataacaacatcaatgaatacTAACAATGCCGGAc > 1:4524612‑M2/22‑35 (MQ=255) ataacaacatcaatgaatacTAACAATGCCGGACa > 1:428875‑M2/21‑35 (MQ=255) ataacaacatcaatgaatacTAACAATGCCGGACa > 1:219431‑M2/21‑35 (MQ=255) taacaacatcaatgaatacTAACAATGCCGGACAg > 1:786918‑M2/20‑35 (MQ=255) taacaacatcaatgaatacTAACAATGCCGGACAg > 1:4989520‑M2/20‑35 (MQ=255) taacaacatcaatgaatacTAACAATGCCGGACAg < 1:4290817‑M2/16‑1 (MQ=255) taacaacatcaatgaatacTAACAATGCCGGACAg < 1:4188187‑M2/16‑1 (MQ=255) taacaacatcaatgaatacTAACAATGCCGGACAg > 1:3569304‑M2/20‑35 (MQ=255) taacaacatcaatgaatacTAACAATGCCGGACAg > 1:2497562‑M2/20‑35 (MQ=255) taacaacatcaatgaatacTAACAATGCCGGACAg > 1:7252770‑M2/20‑35 (MQ=255) taacaacatcaatgaatacTAACAATGCCGGACAg > 1:5988263‑M2/20‑35 (MQ=255) taacaacatcaatgaatacTAACAATGCCGGACAg > 1:5711895‑M2/20‑35 (MQ=255) aacaacatcaatgaatacTAACAATGCCGGACAgg < 1:4178339‑M2/17‑1 (MQ=255) acaacatcaatgaatacTAACAATGCCGGACAGGa > 1:5889698‑M2/18‑35 (MQ=255) acaacatcaatgaatacTAACAATGCCGGACAGGa > 1:7698166‑M2/18‑35 (MQ=255) acaacatcaatgaatacTAACAATGCCGGACAGGa > 1:931697‑M2/18‑35 (MQ=255) acaacatcaatgaatacTAACAATGCCGGACAGGa < 1:1840489‑M2/18‑1 (MQ=255) acaacatcaatgaatacTAACAATGCCGGACAGGa > 1:670329‑M2/18‑35 (MQ=255) acaacatcaatgaatacTAACAATGCCGGACAGGa > 1:4966907‑M2/18‑35 (MQ=255) caacatcaatgaatacTAACAATGCCGGACAGGAg < 1:6625417‑M2/19‑1 (MQ=255) caacatcaatgaatacTAACAATGCCGGACAGGAg < 1:6995245‑M2/19‑1 (MQ=255) caacatcaatgaatacTAACAATGCCGGACAGGAg < 1:5248683‑M2/19‑1 (MQ=255) caacatcaatgaatacTAACAATGCCGGACAGGAg < 1:6918350‑M2/19‑1 (MQ=255) acatcaatgaatacTAACAATGCCGGACAGGAGTa > 1:4618787‑M2/15‑35 (MQ=255) acatcaatgaatacTAACAATGCCGGACAGGAGTa < 1:462807‑M2/21‑1 (MQ=255) acatcaatgaatacTAACAATGCCGGACAGGAGTa > 1:3865736‑M2/15‑35 (MQ=255) catcaatgaatacTAACAATGCCGGACAGGAGTAc < 1:2248306‑M2/22‑1 (MQ=255) catcaatgaatacTAACAATGCCGGACAGGAGTAc < 1:1105923‑M2/22‑1 (MQ=255) atcaatgaatacTAACAATGCCGGACAGGAGTACt < 1:829425‑M2/23‑1 (MQ=255) atcaatgaatacTAACAATGCCGGACAGGAGTACt < 1:817467‑M2/23‑1 (MQ=255) atcaatgaatacTAACAATGCCGGACAGGAGTACt > 1:2799693‑M2/13‑35 (MQ=255) tcaatgaatacTAACAATGCCGGACAGGAGTACTa < 1:2784580‑M2/24‑1 (MQ=255) caatgaatacTAACAATGCCGGACAGGAGTACTAt < 1:5674642‑M2/25‑1 (MQ=255) caatgaatacTAACAATGCCGGACAGGAGTACTAt < 1:3059104‑M2/25‑1 (MQ=255) aatgaatacTAACAATGCCGGACAGGAGTACTATc < 1:4948273‑M2/26‑1 (MQ=255) aatgaatacTAACAATGCCGGACAGGAGTACTATc > 1:6198398‑M2/10‑35 (MQ=255) aatgaatacTAACAATGCCGGACAGGAGTACTATc < 1:348354‑M2/26‑1 (MQ=255) atgaatacTAACAATGCCGGACAGGAGTACTATCa > 1:628929‑M2/9‑35 (MQ=255) atgaatacTAACAATGCCGGACAGGAGTACTATCa > 1:7320520‑M2/9‑35 (MQ=255) atgaatacTAACAATGCCGGACAGGAGTACTATCa < 1:2033834‑M2/27‑1 (MQ=255) atgaatacTAACAATGCCGGACAGGAGTACTATCa > 1:383034‑M2/9‑35 (MQ=255) tgaatacTAACAATGCCGGACAGGAGTACTATCAg > 1:3113254‑M2/8‑35 (MQ=255) aatacTAACAATGCCGGACAGGAGTACTATCAGGc > 1:152287‑M2/6‑35 (MQ=255) aatacTAACAATGCCGGACAGGAGTACTATCAGGc > 1:161610‑M2/6‑35 (MQ=255) aatacTAACAATGCCGGACAGGAGTACTATCAGGc > 1:7106117‑M2/6‑35 (MQ=255) aatacTAACAATGCCGGACAGGAGTACTATCAGGc > 1:1478982‑M2/6‑35 (MQ=255) aatacTAACAATGCCGGACAGGAGTACTATCAGGc > 1:6418710‑M2/6‑35 (MQ=255) aatacTAACAATGCCGGACAGGAGTACTATCAGGc > 1:112048‑M2/6‑35 (MQ=255) aatacTAACAATGCCGGACAGGAGTACTATCAGGc > 1:3486680‑M2/6‑35 (MQ=255) aatacTAACAATGCCGGACAGGAGTACTATCAGGc > 1:5939131‑M2/6‑35 (MQ=255) atacTAACAATGCCGGACAGGAGTACTATCAGGCa < 1:3932792‑M2/31‑1 (MQ=255) atacTAACAATGCCGGACAGGAGTACTATCAGGCa < 1:1717624‑M2/31‑1 (MQ=255) tacTAACAATGCCGGACAGGAGTACTATCAGGCAt > 1:5124021‑M2/4‑35 (MQ=255) acTAACAATGCCGGACAGGAGTACTATCAGGCAtt < 1:6511478‑M2/33‑1 (MQ=255) acTAACAATGCCGGACAGGAGTACTATCAGGCAtt < 1:7724625‑M2/33‑1 (MQ=255) acTAACAATGCCGGACAGGAGTACTATCAGGCAtt > 1:6273445‑M2/3‑35 (MQ=255) acTAACAATGCCGGACAGGAGTACTATCAGGCAtt < 1:5429497‑M2/33‑1 (MQ=255) cTAACAATGCCGGACAGGAGTACTATCAGGCATTc > 1:4734694‑M2/2‑35 (MQ=255) cTAACAATGCCGGACAGGAGTACTATCAGGCATTc > 1:954115‑M2/2‑35 (MQ=255) tAACAATGCCGGACAGGAGTACTATCAGGCATTCg > 1:1818337/1‑35 (MQ=255) tAACAATGCCGGACAGGAGTACTATCAGGCATTCg < 1:7544835/35‑1 (MQ=255) tAACAATGCCGGACAGGAGTACTATCAGGCATTCg > 1:693496/1‑35 (MQ=255) tAACAATGCCGGACAGGAGTACTATCAGGCATTCg > 1:6342905/1‑35 (MQ=255) tAACAATGCCGGACAGGAGTACTATCAGGCATTCg < 1:5674519/35‑1 (MQ=255) tAACAATGCCGGACAGGAGTACTATCAGGCATTCg < 1:1100766/35‑1 (MQ=255) | TGGGAAAGCTGTGATAAGCGTAGTCTACTTGTGATAACAATGCCGGACAGGAGTACTATCAGGCATTCG > NC_000913/3367609‑3367677 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |