| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 93 [0] | [0] 94 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 90 (1.080) | 53/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389851‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:3137653/1‑50ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:2273099/1‑50ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:3168101/49‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:6105532/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:3526956/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:734209/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:5600749/1‑49 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:1126595/1‑49 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:6243279/1‑49 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAAACTTGAAT < 1:1982171/50‑1 AGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:1050458/1‑50 AGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:5674019/1‑50 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT < 1:613999/50‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT < 1:1821417/50‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:2053626/1‑50 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:5081910/49‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:3970752/49‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:1099741/49‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:3643556/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:953599/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:3045809/50‑1 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT < 1:293657/50‑1 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT > 1:4361860/1‑50 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:5418101/1‑50 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC < 1:1211283/50‑1 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 1:2297437/1‑50 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC < 1:548629/50‑1 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 1:4655209/1‑50 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC < 1:4170342/50‑1 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 1:2857219/1‑50 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:4640167/1‑50 AATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:1073183/1‑49 AATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:5778342/1‑49 AATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:2944435/1‑49 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA < 1:3368658/50‑1 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA > 1:4923415/1‑49 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:2834712/1‑50 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:1440187/1‑50 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA < 1:2216152/49‑1 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA < 1:3131749/49‑1 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA > 1:5259861/1‑50 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA > 1:1834134/1‑50 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAAT < 1:3545618/49‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT < 1:2584635/50‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:2506216/1‑50 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT < 1:3198387/50‑1 ATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:3431322/1‑49 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 1:4147953/49‑1 TCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:2049918/1‑49 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACA > 1:4127922/1‑50 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:849843/1‑50 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:542396/1‑50 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT < 1:2357076/50‑1 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT < 1:818791/50‑1 GAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT > 1:1099036/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:746790/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:972793/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:4226848/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 1:2010810/50‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG < 1:1912653/48‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG < 1:562375/50‑1 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 1:316835/50‑1 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT > 1:5614465/1‑50 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT < 1:199150/50‑1 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT > 1:3088097/1‑50 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT < 1:4452849/50‑1 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT > 1:3274940/1‑50 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT > 1:5243524/1‑50 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 1:4115242/49‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 1:6315360/49‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 1:5880115/1‑49 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCA < 1:3928289/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG > 1:3726457/1‑50 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG > 1:5587060/1‑50 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG > 1:1997090/1‑50 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:2828039/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 1:393050/1‑50 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:2602285/49‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG > 1:4760812/1‑50 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG < 1:3990901/50‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG > 1:2189498/1‑50 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC < 1:1396608/49‑1 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:5839971/1‑49 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:486632/1‑49 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:3673518/1‑49 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:3844149/1‑49 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > 1:4953660/1‑50 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > 1:5202773/1‑50 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > 1:901378/1‑50 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > 1:1466529/1‑50 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389851‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |