| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 45 (0.620) +CGAGAT |
29/86 | 0.6 | 64.3% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 4070444 = | 57 (0.690) | intergenic (‑43/+71) | yihR/yihS | putative aldose 1‑epimerase YihR/sulfoquinovose isomerase | |||||
Only 100 of 103 total aligned reads displayed.
ACGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACC > NC_000913/4070395‑4070493 | aCGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCg < 1:4132184/50‑1 (MQ=255) cagaatttccaggtcagacgggctgcaagttgcagaccgttacgagatg > 1:4367023‑M2/49‑49 (MQ=255) cGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCg > 1:6427041/1‑49 (MQ=255) gACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGa < 1:3676552/50‑1 (MQ=255) gACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGa > 1:5127461/1‑50 (MQ=255) gACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGa < 1:2643843/50‑1 (MQ=255) agaatttccaggtcagacgggctgcaagttgcagaccgttacgagatgg < 1:774423‑M2/2‑1 (MQ=255) agaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGa < 1:3765605‑M2/3‑1 (MQ=255) agaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGa > 1:3998225‑M2/48‑50 (MQ=255) gaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGAc < 1:5768051‑M2/4‑1 (MQ=255) gaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGAc > 1:5738850‑M2/47‑50 (MQ=255) gaatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGAc > 1:4932085‑M2/47‑50 (MQ=255) cATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACg < 1:1594726/50‑1 (MQ=255) cATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACg < 1:5267957/50‑1 (MQ=255) aatttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACg < 1:3861617‑M2/5‑1 (MQ=255) atttccaggtcagacgggctgcaagttgcagaccgttacgagatGGACgg > 1:2917291‑M2/45‑50 (MQ=255) aTACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACgg < 1:361794/50‑1 (MQ=255) aTACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACgg > 1:2164002/1‑50 (MQ=255) aTACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACgg < 1:5304201/50‑1 (MQ=255) aCAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTc > 1:5259937/1‑50 (MQ=255) cAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTcc < 1:3443213/50‑1 (MQ=255) cAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTcc < 1:4967809/50‑1 (MQ=255) cAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTcc < 1:2511403/50‑1 (MQ=255) ccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTcc < 1:6277405‑M2/9‑1 (MQ=255) ccaggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTcc < 1:5612757‑M2/9‑1 (MQ=255) aGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTccc > 1:2347695/1‑50 (MQ=255) aGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTccc < 1:4143497/50‑1 (MQ=255) aGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTccc > 1:593817/1‑50 (MQ=255) aGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTccc > 1:1385872/1‑50 (MQ=255) gCCTCCCGTGAGGCTGATGTCAAACCCAAAAAATGCACCGGACGGTcccc > 1:2393504/1‑50 (MQ=255) ccTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCt < 1:5386037/50‑1 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCt > 1:4585820‑M2/39‑50 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTc < 1:1097521‑M2/13‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTc < 1:2007716‑M2/13‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTc < 1:5138333‑M2/13‑1 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc < 1:5800757/50‑1 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc > 1:5529111/1‑50 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc < 1:3274301/50‑1 (MQ=255) cTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTc < 1:3390776/50‑1 (MQ=255) tcagacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGc < 1:1995932‑M2/15‑1 (MQ=255) cccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGc > 1:4536608/1‑50 (MQ=255) cccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGc > 1:2648784/1‑50 (MQ=255) ccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCg < 1:856477/48‑1 (MQ=255) ccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcc < 1:6321548/50‑1 (MQ=255) ccGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGc < 1:4389451/49‑1 (MQ=255) agacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGccc > 1:2343323‑M2/34‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGcc < 1:4519845‑M2/16‑1 (MQ=255) gacgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGcccc > 1:1784070‑M2/33‑50 (MQ=255) gTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcccc < 1:3080404/50‑1 (MQ=255) gTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGcccc < 1:1815607/50‑1 (MQ=255) acgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCgccccc > 1:6107493‑M2/32‑49 (MQ=255) cgggctgcaagttgcagaccgttacgagatGGGCGGTCCCCTcgccccct < 1:1147286‑M2/20‑3 (MQ=255) cgggctgcaagttgcagaccgttacgagatGGACGGTCCCCTcgccccct < 1:274034‑M2/20‑3 (MQ=255) gggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCctt > 1:5876866‑M2/30‑50 (MQ=255) gggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCctt > 1:5576657‑M2/30‑50 (MQ=255) gggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCctt < 1:698193‑M2/21‑1 (MQ=255) gggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCctt > 1:2715576‑M2/30‑50 (MQ=255) aGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCtt < 1:3694890/49‑1 (MQ=255) ggctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTg < 1:3354056‑M2/22‑1 (MQ=255) ggCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTg < 1:3883324/50‑1 (MQ=255) ggCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTg < 1:1111636/50‑1 (MQ=255) ggCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTg > 1:1438418/1‑50 (MQ=255) gCTGATGTCAAACCCAAAAACTGCACCGGTCGGTCCCCTCGCCCCTTTgg > 1:2033142/1‑50 (MQ=255) gCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTgg < 1:6245767/50‑1 (MQ=255) gCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTgg < 1:352181/50‑1 (MQ=255) gCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTgg < 1:5363048/50‑1 (MQ=255) ctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg < 1:3715667‑M2/24‑1 (MQ=255) ctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg > 1:2452859‑M2/27‑50 (MQ=255) ctgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg > 1:4264022‑M2/27‑50 (MQ=255) cTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTggg < 1:1816286/50‑1 (MQ=255) tgcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg > 1:5732200‑M2/26‑49 (MQ=255) gcaagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTggg > 1:3279642‑M2/25‑48 (MQ=255) caagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGgag < 1:1781445‑M2/27‑1 (MQ=255) aagttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGga > 1:5700694‑M2/23‑48 (MQ=255) agttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGagag > 1:5430344‑M2/22‑50 (MQ=255) tCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAgg < 1:362460/50‑1 (MQ=255) tCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAgg < 1:1491609/50‑1 (MQ=255) gttgcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAgg > 1:5539594‑M2/21‑50 (MQ=255) aaaCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:1927794/1‑50 (MQ=255) gcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGt < 1:3681612‑M2/32‑1 (MQ=255) gcagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGt < 1:3462134‑M2/32‑1 (MQ=255) cagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGt > 1:2355192‑M2/17‑48 (MQ=255) cagaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTa < 1:761618‑M2/34‑1 (MQ=255) aCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:4764182/1‑48 (MQ=255) aCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:5135492/1‑48 (MQ=255) aCCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTa < 1:4854252/50‑1 (MQ=255) agaccgttacgagatGGACGGTCCCCTCGCGCCCTTGGGGAGAGGGTTAg < 1:5888949‑M2/35‑1 (MQ=255) gaccgttacgaggtGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAgg < 1:1807771‑M2/36‑1 (MQ=255) gaccgttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAgg < 1:3714012‑M2/36‑1 (MQ=255) ccAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 1:1579856/1‑50 (MQ=255) cAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 1:9150/50‑1 (MQ=255) aaaaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGga < 1:5900379/50‑1 (MQ=255) aaaaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGgag < 1:5372621/50‑1 (MQ=255) gttacgagatGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggt > 1:5894794‑M2/11‑47 (MQ=255) aaCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGagag < 1:6105538/50‑1 (MQ=255) aCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAgg > 1:2233781/1‑50 (MQ=255) aCTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAgg > 1:1113372/1‑50 (MQ=255) gCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAgggg > 1:1100985/1‑49 (MQ=255) cGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAAc > 1:5472958/1‑50 (MQ=255) ggACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAAcc > 1:1208474/1‑50 (MQ=255) | ACGACATACAGCCTCCCGTGAGGCTGATGTCAAACCCAAAAACTGCACCGGACGGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGAGAGGGGAAAACC > NC_000913/4070395‑4070493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |