| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 508,873 | Δ40,744 bp | copA–[ylbE] | 37 genes copA, copA, copA, glsA, ybaT, cueR, ybbJ, qmcA, fetA, fetB, cnoX, ybbO, tesA, ybbA, ybbP, rhsD, ybbC, ylbH, ybbD, ylbI, ylbG, selU, allS, allA, allR, gcl, hyi, glxR, ybbW, allB, ybbY, glxK, allE, allC, allD, fdrA, [ylbE] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 508873 | 549616 | 40744 | 95 [0] | [0] 96 | copA–[ylbE] | copA,copA,copA,glsA,ybaT,cueR,ybbJ,qmcA,fetA,fetB,cnoX,ybbO,tesA,ybbA,ybbP,rhsD,ybbC,ylbH,ybbD,ylbI,ylbG,selU,allS,allA,allR,gcl,hyi,glxR,ybbW,allB,ybbY,glxK,allE,allC,allD,fdrA,[ylbE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 508872 | 0 (0.000) | 93 (1.120) | 56/98 | 0.0 | 100% | intergenic (+313/+3) | ybaQ/copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| ? | NC_000913 | 549617 = | 0 (0.000) | intergenic (+1/‑10) | ylbE/ylbF | DUF1116 domain‑containing protein YlbE/DUF2877 domain‑containing protein YlbF | |||||
TGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACTCACTA > NC_000913/508823‑508921 | tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 1:5360134/50‑1 (MQ=255)tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt > 1:5584799/1‑50 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg < 1:2531785‑M1/50‑3 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg < 1:1262603‑M1/49‑2 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg > 1:3236446‑M1/1‑48 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg > 1:4516799‑M1/1‑47 (MQ=255) tCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaa > 1:5299503‑M1/1‑46 (MQ=255) tCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaa < 1:6128400‑M1/50‑5 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg < 1:4985339‑M1/50‑7 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg > 1:6173275‑M1/1‑44 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg < 1:2086834‑M1/50‑7 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:1033518‑M1/49‑6 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:4882807‑M1/49‑6 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:2753950‑M1/49‑6 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 1:1400839‑M1/49‑6 (MQ=255) gCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcg > 1:404910‑M1/1‑41 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgc < 1:1464953‑M1/49‑10 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgc < 1:2245537‑M1/49‑10 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa < 1:5365712‑M1/50‑12 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa > 1:5375961‑M1/1‑39 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa > 1:3629303‑M1/1‑39 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat < 1:3247713‑M1/50‑13 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat < 1:5314816‑M1/50‑13 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:6323607‑M1/1‑38 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:564899‑M1/1‑38 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:5663541‑M1/1‑38 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:2286271‑M1/1‑38 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:4173915‑M1/1‑38 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:1813419‑M1/1‑37 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 1:3226260‑M1/1‑37 (MQ=255) aTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatga < 1:5189305‑M1/50‑15 (MQ=255) aTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatga > 1:2234620‑M1/1‑36 (MQ=255) tGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac < 1:3972431‑M1/50‑16 (MQ=255) tGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac < 1:2199142‑M1/50‑16 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacga > 1:3822276‑M1/1‑33 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacg < 1:2075621‑M1/49‑17 (MQ=255) gcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat > 1:2633117‑M1/1‑32 (MQ=255) gcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat < 1:3204562‑M1/50‑19 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatc < 1:5804069‑M1/50‑20 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatc < 1:203061‑M1/50‑20 (MQ=255) aCCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcat > 1:4399438‑M1/1‑29 (MQ=255) aCCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcat > 1:5015256‑M1/1‑29 (MQ=255) ccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 1:5290090‑M1/1‑27 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca < 1:816022‑M1/50‑25 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca < 1:5783717‑M1/50‑25 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcc < 1:2482070‑M1/50‑28 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatc < 1:4259121‑M1/49‑27 (MQ=255) agcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcct > 1:1924508‑M1/1‑22 (MQ=255) gcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctc < 1:1987043‑M1/50‑30 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct > 1:5715948‑M1/1‑20 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct > 1:406575‑M1/1‑20 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcatct < 1:1594667‑M1/50‑31 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct > 1:6160131‑M1/1‑17 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct > 1:2226593‑M1/1‑17 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct > 1:5098548‑M1/1‑17 (MQ=255) gcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgctt < 1:1199490‑M1/50‑35 (MQ=255) gcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgctt > 1:2020821‑M1/1‑16 (MQ=255) cATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttg < 1:571634‑M1/50‑36 (MQ=255) cATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttg < 1:915437‑M1/50‑36 (MQ=255) cATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttg < 1:1433716‑M1/50‑36 (MQ=255) tCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcc < 1:1820882‑M1/50‑38 (MQ=255) tCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcc < 1:622047‑M1/50‑38 (MQ=255) ccGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:5626778‑M1/1‑12 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag < 1:3112511‑M1/50‑40 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:2762102‑M1/1‑11 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:2354203‑M1/1‑11 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:6344083‑M1/1‑11 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag < 1:3217993‑M1/50‑40 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcca < 1:5396304‑M1/49‑39 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcca < 1:756220‑M1/49‑39 (MQ=255) cAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagta < 1:5485632‑M1/50‑42 (MQ=255) aaTGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:3062015‑M1/1‑8 (MQ=255) aaTGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagtag < 1:75265‑M1/50‑43 (MQ=255) aaTGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:4005872‑M1/1‑8 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagt < 1:466797‑M1/50‑44 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagt < 1:1844806‑M1/50‑44 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:160701‑M1/1‑7 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:6075350‑M1/1‑7 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagta < 1:2537197‑M1/50‑45 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagta < 1:3360900‑M1/50‑45 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagta < 1:3886395‑M1/50‑45 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:6157487‑M1/1‑6 (MQ=255) gatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag > 1:2819970‑M1/1‑5 (MQ=255) gatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag > 1:1694583‑M1/1‑5 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc > 1:4540895‑M1/1‑4 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc < 1:581534‑M1/50‑47 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc < 1:2674988‑M1/50‑47 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc < 1:2901419‑M1/50‑47 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag < 1:3648875‑M1/49‑46 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag < 1:761411‑M1/49‑46 (MQ=255) atgTggaacgcgcaatgacgatcagccatcctctgcttgccagtagtagc < 1:5814835‑M1/50‑47 (MQ=255) gtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg > 1:4515582‑M1/1‑2 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgca > 1:5437901‑M1/1‑1 (MQ=255) tggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcgca > 1:1080513‑M1/1‑1 (MQ=255) tggaacgcgcaaggacgatcatccatcctctgcttgccagtagtagcgca < 1:2274308‑M1/50‑50 (MQ=255) | TGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACTCACTA > NC_000913/508823‑508921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |