| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,466,545 | Δ9,634 bp | [intS]–[ypdJ] | 15 genes [intS], yfdG, yfdH, yfdI, yfdK, yfdL, yfdM, yfdN, yfdO, yfdP, yfdQ, yfdR, yfdS, [yfdT], [ypdJ] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2466545 | 2476178 | 9634 | 92 [0] | [0] 90 | [intS]–[ypdJ] | [intS],yfdG,yfdH,yfdI,yfdK,yfdL,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2466544 | 0 (0.000) | 90 (1.240) | 51/98 | 0.0 | 100% | intergenic (+161/‑1) | argW/intS | tRNA‑Arg/CPS‑53 (KpLE1) prophage; prophage CPS‑53 integrase |
| ? | NC_000913 | 2476179 = | 0 (0.000) | coding (86/141 nt) | ypdJ | CPS‑53 (KpLE1) prophage; putative uncharacterized protein YpdJ | |||||
TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466496‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT > NC_000913/2476179‑2476227 TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCT < 1:3808542/50‑1 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA > 1:1932372/1‑48 GGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAG < 1:2876747/50‑1 GGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAG > 1:2558676/1‑50 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC < 1:633306/50‑1 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC < 1:4604429/50‑1 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC < 1:469059/50‑1 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:3089500/1‑49 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:4445633/1‑49 TAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 1:991808/1‑50 TAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 1:5027067/1‑50 TAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA < 1:1558622/50‑1 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:4708523/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCAT < 1:2218891/49‑1 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACACTAGAGCCAT < 1:2381780/49‑1 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:3984667/1‑49 AGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAG > 1:3382742/1‑50 AGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAG > 1:3820209/1‑50 GTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGC > 1:1558240/1‑50 GTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGC > 1:3492229/1‑50 TGGATAAAATAATTTTGCCCACCGGATTTTTACCCTAGAGCCATACAGCC < 1:1201924/50‑1 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:1417322/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:3165369/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:1080716/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:806728/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC < 1:2007416/50‑1 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:5237135/1‑50 GGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 1:4117379/1‑50 GGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 1:73500/1‑50 ATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:2343898/1‑50 ATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:3932721/1‑50 ATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:5166473/1‑50 ATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:508133/1‑50 ATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA < 1:5119945/50‑1 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCAC < 1:3296860/50‑1 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCAC < 1:1058728/50‑1 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:2183906/1‑49 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:3814707/1‑49 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:2597899/1‑49 AAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA > 1:3915389/1‑50 AAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA > 1:373787/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC < 1:1909834/50‑1 AATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACT > 1:5136903/1‑50 AATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACT < 1:2059229/50‑1 AATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACT < 1:2549999/50‑1 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:105597/1‑50 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC < 1:4596095/50‑1 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:2999131/1‑49 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:2100334/1‑49 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:3680600/1‑50 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:1512389/1‑50 TTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATG < 1:4361345/50‑1 TTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:3550079/1‑48 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG > 1:1131992/1‑50 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG > 1:3259850/1‑50 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG > 1:1269521/1‑50 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGA < 1:1474938/49‑1 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:2450400/1‑50 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:350708/1‑50 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC > 1:3832278/1‑50 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC > 1:4241335/1‑50 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC < 1:2748165/50‑1 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC > 1:464711/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 1:5062839/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 1:4541663/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 1:3343273/1‑50 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:2989159/1‑50 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT < 1:1808194/50‑1 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT < 1:589810/50‑1 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTC < 1:1333535/50‑1 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:1754885/1‑49 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:2767915/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:5523469/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:5202932/1‑50 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT < 1:4945664/50‑1 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT < 1:1130995/50‑1 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT > 1:4226926/1‑50 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT < 1:5543754/50‑1 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT > 1:86844/1‑50 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCATGTCAGTTT < 1:827300/50‑1 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT < 1:4986080/49‑1 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 1:2323685/1‑49 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT > 1:1394472/1‑49 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT > 1:4611751/1‑49 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAA < 1:1376694/50‑1 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAA < 1:3021485/50‑1 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT < 1:946229/50‑1 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:3026339/1‑49 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:5339909/1‑49 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:5557210/1‑49 TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466496‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT > NC_000913/2476179‑2476227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |