| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,466,545 | Δ9,634 bp | [intS]–[ypdJ] | 15 genes [intS], yfdG, yfdH, yfdI, yfdK, yfdL, yfdM, yfdN, yfdO, yfdP, yfdQ, yfdR, yfdS, [yfdT], [ypdJ] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2466545 | 2476178 | 9634 | 92 [0] | [0] 90 | [intS]–[ypdJ] | [intS],yfdG,yfdH,yfdI,yfdK,yfdL,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2466544 | 0 (0.000) | 90 (1.240) | 51/98 | 0.0 | 100% | intergenic (+161/‑1) | argW/intS | tRNA‑Arg/CPS‑53 (KpLE1) prophage; prophage CPS‑53 integrase |
| ? | NC_000913 | 2476179 = | 0 (0.000) | coding (86/141 nt) | ypdJ | CPS‑53 (KpLE1) prophage; putative uncharacterized protein YpdJ | |||||
TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCATGCTCACCGTTAAGCAGATTGAAGCAGCAAAGCCGAAAGAAAAACCAT > NC_000913/2466496‑2466593 | tGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTAccc > 1:1403416/1‑49 (MQ=255)tGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCt < 1:3808542‑M1/50‑2 (MQ=255) aCGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTAccc > 1:132125/1‑47 (MQ=255) cGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCta > 1:1932372‑M1/1‑46 (MQ=255) gggTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagag > 1:2558676‑M1/1‑45 (MQ=255) gggTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagag < 1:2876747‑M1/50‑6 (MQ=255) ggTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagc < 1:633306‑M1/50‑7 (MQ=255) ggTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagc < 1:469059‑M1/50‑7 (MQ=255) ggTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagc < 1:4604429‑M1/50‑7 (MQ=255) gTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagc > 1:4445633‑M1/1‑43 (MQ=255) gTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagc > 1:3089500‑M1/1‑43 (MQ=255) tAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagcca > 1:991808‑M1/1‑42 (MQ=255) tAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagcca < 1:1558622‑M1/50‑9 (MQ=255) tAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagcca > 1:5027067‑M1/1‑42 (MQ=255) aaaaGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccata > 1:4708523‑M1/1‑40 (MQ=255) aaaaGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccat < 1:2218891‑M1/49‑10 (MQ=255) aaaaGTGGATAAAATAATTTTACCCACCGGATTTTTACACtagagccat < 1:2381780‑M1/49‑10 (MQ=255) aaaGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccata > 1:3984667‑M1/1‑39 (MQ=255) aGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacag > 1:3382742‑M1/1‑37 (MQ=255) aGTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacag > 1:3820209‑M1/1‑37 (MQ=255) gTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagc > 1:3492229‑M1/1‑36 (MQ=255) gTGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagc > 1:1558240‑M1/1‑36 (MQ=255) tGGATAAAATAATTTTGCCCACCGGATTTTTACCCtagagccatacagcc < 1:1201924‑M1/50‑16 (MQ=255) tGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcc < 1:2007416‑M1/50‑16 (MQ=255) tGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcc > 1:3165369‑M1/1‑35 (MQ=255) tGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcc > 1:1417322‑M1/1‑35 (MQ=255) tGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcc > 1:5237135‑M1/1‑35 (MQ=255) tGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcc > 1:1080716‑M1/1‑35 (MQ=255) tGGATAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcc > 1:806728‑M1/1‑35 (MQ=255) ggATAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcct > 1:4117379‑M1/1‑34 (MQ=255) ggATAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcct > 1:73500‑M1/1‑34 (MQ=255) aTAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcctca > 1:2343898‑M1/1‑32 (MQ=255) aTAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcctca > 1:5166473‑M1/1‑32 (MQ=255) aTAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcctca < 1:5119945‑M1/50‑19 (MQ=255) aTAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcctca > 1:508133‑M1/1‑32 (MQ=255) aTAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcctca > 1:3932721‑M1/1‑32 (MQ=255) tAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcctcac < 1:3296860‑M1/50‑20 (MQ=255) tAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcctcac < 1:1058728‑M1/50‑20 (MQ=255) tAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcctca > 1:2597899‑M1/1‑31 (MQ=255) tAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcctca > 1:3814707‑M1/1‑31 (MQ=255) tAAAATAATTTTACCCACCGGATTTTTACCCtagagccatacagcctca > 1:2183906‑M1/1‑31 (MQ=255) aaaaTAATTTTACCCACCGGATTTTTACCCtagagccatacagcctcaca > 1:3915389‑M1/1‑30 (MQ=255) aaaaTAATTTTACCCACCGGATTTTTACCCtagagccatacagcctcaca > 1:373787‑M1/1‑30 (MQ=255) aaaTAATTTTACCCACCGGATTTTTACCCtagagccatacagcctcacac < 1:1909834‑M1/50‑22 (MQ=255) aataatTTTACCCACCGGATTTTTACCCtagagccatacagcctcacact < 1:2549999‑M1/50‑23 (MQ=255) aataatTTTACCCACCGGATTTTTACCCtagagccatacagcctcacact > 1:5136903‑M1/1‑28 (MQ=255) aataatTTTACCCACCGGATTTTTACCCtagagccatacagcctcacact < 1:2059229‑M1/50‑23 (MQ=255) ataatTTTACCCACCGGATTTTTACCCtagagccatacagcctcacactc > 1:105597‑M1/1‑27 (MQ=255) ataatTTTACCCACCGGATTTTTACCCtagagccatacagcctcacactc < 1:4596095‑M1/50‑24 (MQ=255) taatTTTACCCACCGGATTTTTACCCtagagccatacagcctcacactc > 1:2100334‑M1/1‑26 (MQ=255) taatTTTACCCACCGGATTTTTACCCtagagccatacagcctcacactc > 1:2999131‑M1/1‑26 (MQ=255) atTTTACCCACCGGATTTTTACCCtagagccatacagcctcacactcgat > 1:3680600‑M1/1‑24 (MQ=255) atTTTACCCACCGGATTTTTACCCtagagccatacagcctcacactcgat > 1:1512389‑M1/1‑24 (MQ=255) ttttACCCACCGGATTTTTACCCtagagccatacagcctcacactcgatg < 1:4361345‑M1/50‑28 (MQ=255) tttACCCACCGGATTTTTACCCtagagccatacagcctcacactcgat > 1:3550079‑M1/1‑22 (MQ=255) ttACCCACCGGATTTTTACCCtagagccatacagcctcacactcgatgag > 1:1269521‑M1/1‑21 (MQ=255) ttACCCACCGGATTTTTACCCtagagccatacagcctcacactcgatgag > 1:1131992‑M1/1‑21 (MQ=255) ttACCCACCGGATTTTTACCCtagagccatacagcctcacactcgatgag > 1:3259850‑M1/1‑21 (MQ=255) ttACCCACCGGATTTTTACCCtagagccatacagcctcacactcgatga < 1:1474938‑M1/49‑29 (MQ=255) aCCCACCGGATTTTTACCCtagagccatacagcctcacactcgatgaggc > 1:2450400‑M1/1‑19 (MQ=255) aCCCACCGGATTTTTACCCtagagccatacagcctcacactcgatgaggc > 1:350708‑M1/1‑19 (MQ=255) cccACCGGATTTTTACCCtagagccatacagcctcacactcgatgaggcc < 1:2748165‑M1/50‑33 (MQ=255) cccACCGGATTTTTACCCtagagccatacagcctcacactcgatgaggcc > 1:464711‑M1/1‑18 (MQ=255) cccACCGGATTTTTACCCtagagccatacagcctcacactcgatgaggcc > 1:4241335‑M1/1‑18 (MQ=255) cccACCGGATTTTTACCCtagagccatacagcctcacactcgatgaggcc > 1:3832278‑M1/1‑18 (MQ=255) ccACCGGATTTTTACCCtagagccatacagcctcacactcgatgaggcct > 1:4541663‑M1/1‑17 (MQ=255) ccACCGGATTTTTACCCtagagccatacagcctcacactcgatgaggcct > 1:3343273‑M1/1‑17 (MQ=255) ccACCGGATTTTTACCCtagagccatacagcctcacactcgatgaggcct > 1:5062839‑M1/1‑17 (MQ=255) aCCGGATTTTTACCCtagagccatacagcctcacactcgatgaggcctgt < 1:589810‑M1/50‑36 (MQ=255) aCCGGATTTTTACCCtagagccatacagcctcacactcgatgaggcctgt > 1:2989159‑M1/1‑15 (MQ=255) aCCGGATTTTTACCCtagagccatacagcctcacactcgatgaggcctgt < 1:1808194‑M1/50‑36 (MQ=255) ccGGATTTTTACCCtagagccatacagcctcacactcgatgaggcctgtc < 1:1333535‑M1/50‑37 (MQ=255) ccGGATTTTTACCCtagagccatacagcctcacactcgatgaggcctgt > 1:1754885‑M1/1‑14 (MQ=255) ggATTTTTACCCtagagccatacagcctcacactcgatgaggcctgtcag > 1:2767915‑M1/1‑12 (MQ=255) ggATTTTTACCCtagagccatacagcctcacactcgatgaggcctgtcag > 1:5523469‑M1/1‑12 (MQ=255) ggATTTTTACCCtagagccatacagcctcacactcgatgaggcctgtcag > 1:5202932‑M1/1‑12 (MQ=255) aTTTTTACCCtagagccatacagcctcacactcgatgaggcctgtcagtt > 1:4226926‑M1/1‑10 (MQ=255) aTTTTTACCCtagagccatacagcctcacactcgatgaggcctgtcagtt < 1:1130995‑M1/50‑41 (MQ=255) aTTTTTACCCtagagccatacagcctcacactcgatgaggcctgtcagtt < 1:4945664‑M1/50‑41 (MQ=255) tttttACCCtagagccatacagcctcacactcgatgaggcctgtcagttt > 1:86844‑M1/1‑9 (MQ=255) tttttACCCtagagccatacagcctcacactcgatgaggcctgtcagttt < 1:5543754‑M1/50‑42 (MQ=255) tttttACCCtagagccatacagcctcacactcgatgaggcatgtcagttt < 1:827300‑M1/50‑42 (MQ=255) ttACCCtagagccatacagcctcacactcgatgaggcctgtcagtttct > 1:2323685‑M1/1‑6 (MQ=255) ttACCCtagagccatacagcctcacactcgatgaggcctgtcagtttct < 1:4986080‑M1/49‑44 (MQ=255) tACCCtagagccatacagcctcacactcgatgaggcctgtcagtttctt > 1:1394472‑M1/1‑5 (MQ=255) tACCCtagagccatacagcctcacactcgatgaggcctgtcagtttctt > 1:4611751‑M1/1‑5 (MQ=255) ccctagagccatacagcctcacactcgatgaggcctgtcagtttcttaaa < 1:1376694‑M1/50‑48 (MQ=255) ccctagagccatacagcctcacactcgatgaggcctgtcagtttcttaaa < 1:3021485‑M1/50‑48 (MQ=255) ctagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaat < 1:946229‑M1/50‑50 (MQ=255) ctagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaa > 1:5557210‑M1/1‑1 (MQ=255) ctagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaa > 1:5339909‑M1/1‑1 (MQ=255) ctagagccatacagcctcacactcgatgaggcctgtcagtttcttaaaa > 1:3026339‑M1/1‑1 (MQ=255) | TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCATGCTCACCGTTAAGCAGATTGAAGCAGCAAAGCCGAAAGAAAAACCAT > NC_000913/2466496‑2466593 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |