| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 87 [0] | [0] 84 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 84 (1.160) | 53/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601153‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > NC_000913/2614796‑2614844 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:3127128/1‑49 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCG > 1:3225372/1‑49 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC < 1:5166491/48‑1 ATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGA < 1:1024039/49‑1 ATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGA > 1:4943323/1‑49 ATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGA > 1:363429/1‑49 GCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:5216476/1‑49 GCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:1958839/1‑49 CAATATGAAATGCAATGTTTCAGATCATTTTCAAAGATCCGACCGAAAaa < 1:1622015/50‑3 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGT < 1:4256792/50‑1 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGT > 1:3894254/1‑50 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGT > 1:4997065/1‑50 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGT < 1:3005398/50‑1 TATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTT > 1:316437/1‑50 TATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTT > 1:3166572/1‑50 ATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC > 1:2228547/1‑50 ATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC > 1:4510458/1‑50 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCG < 1:3947296/50‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCG < 1:1503010/50‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCG > 1:843179/1‑50 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:402952/49‑1 GAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGT > 1:4165004/1‑50 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG < 1:3294919/50‑1 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG < 1:1832203/50‑1 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG < 1:4973387/50‑1 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG < 1:3035570/50‑1 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG < 1:4517481/50‑1 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG < 1:3715220/50‑1 TGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGG < 1:2304101/50‑1 GCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGC > 1:756484/1‑50 CAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT < 1:5031752/50‑1 CAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGC < 1:3800206/49‑1 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT > 1:1897229/1‑49 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT > 1:2381415/1‑49 TGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:3229983/1‑48 GTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:439671/1‑47 GTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:3475238/1‑47 GTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:700114/1‑47 GTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:2012905/1‑47 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:1746367/1‑46 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:4901007/1‑46 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:10125/1‑50 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:3297406/1‑50 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:5064801/1‑50 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:294754/1‑50 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATT < 1:2491175/49‑1 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATT < 1:496094/49‑1 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATT < 1:4046780/49‑1 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT < 1:1565648/50‑1 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA < 1:2682803/49‑1 ATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTC > 1:1588025/1‑50 ATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTC > 1:5446205/1‑50 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGGAGATTATTCT > 1:5576122/1‑50 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT > 1:2980664/1‑50 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTAAAGATTATTCT < 1:4314612/50‑1 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG < 1:2998060/50‑1 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG > 1:278147/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG < 1:922924/50‑1 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG > 1:189372/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT < 1:2752349/49‑1 TTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGC < 1:1949184/50‑1 TTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCG > 1:954587/1‑50 TTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCG > 1:1449487/1‑50 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCG < 1:3835107/49‑1 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCG < 1:379227/49‑1 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGA > 1:249672/1‑50 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGA > 1:3662776/1‑50 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAT > 1:3499022/1‑50 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATT > 1:364252/1‑50 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTT < 1:5114971/50‑1 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTG < 1:2163145/50‑1 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTG > 1:4317860/1‑50 AGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGC < 1:709384/50‑1 AGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGC < 1:4071089/50‑1 GCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCC < 1:5160299/50‑1 GCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCC > 1:3786952/1‑50 GCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCC > 1:4106951/1‑50 CCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCC > 1:4234230/1‑49 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT > 1:4074929/1‑50 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT < 1:4851415/50‑1 ACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC > 1:1733089/1‑50 CCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG < 1:3335386/50‑1 CCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > 1:3186813/1‑50 CCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG < 1:2408557/50‑1 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601153‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > NC_000913/2614796‑2614844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |