| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 87 [0] | [0] 84 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 84 (1.160) | 53/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
GTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > NC_000913/2614748‑2614844 | ttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc > 1:3127128‑M2/49‑49 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccg > 1:3225372‑M2/48‑49 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc < 1:5166491‑M2/1‑1 (MQ=255) atgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccga < 1:1024039‑M2/3‑1 (MQ=255) atgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccga > 1:4943323‑M2/47‑49 (MQ=255) atgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccga > 1:363429‑M2/47‑49 (MQ=255) gcaatatgaaatgcaatgtttcatatcattttcaaggagccgacCGaaa > 1:5216476‑M2/45‑49 (MQ=255) gcaatatgaaatgcaatgtttcatatcattttcaaggagccgacCGaaa > 1:1958839‑M2/45‑49 (MQ=255) caatatgaaatgcaatgtttcagatcattttcaaagatccgaccgaaaaa < 1:1622015‑M2/7‑3 (MQ=255) atatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGt < 1:4256792‑M2/9‑1 (MQ=255) atatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGt > 1:3894254‑M2/42‑50 (MQ=255) atatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGt > 1:4997065‑M2/42‑50 (MQ=255) atatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGt < 1:3005398‑M2/9‑1 (MQ=255) tatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGtt > 1:316437‑M2/41‑50 (MQ=255) tatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGtt > 1:3166572‑M2/41‑50 (MQ=255) atgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc > 1:2228547‑M2/40‑50 (MQ=255) atgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc > 1:4510458‑M2/40‑50 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcg < 1:3947296‑M2/12‑1 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcg < 1:1503010‑M2/12‑1 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcg > 1:843179‑M2/39‑50 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc < 1:402952‑M2/11‑1 (MQ=255) gaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgt > 1:4165004‑M2/38‑50 (MQ=255) aatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtcg < 1:3294919‑M2/15‑1 (MQ=255) aatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtcg < 1:1832203‑M2/15‑1 (MQ=255) aatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtcg < 1:4973387‑M2/15‑1 (MQ=255) aatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtcg < 1:3035570‑M2/15‑1 (MQ=255) atgcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCgg < 1:4517481‑M2/16‑1 (MQ=255) atgcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCgg < 1:3715220‑M2/16‑1 (MQ=255) tgcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCggg < 1:2304101‑M2/17‑1 (MQ=255) gcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGc > 1:756484‑M2/33‑50 (MQ=255) caatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGc < 1:3800206‑M2/18‑1 (MQ=255) caatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt < 1:5031752‑M2/19‑1 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt > 1:1897229‑M2/31‑49 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt > 1:2381415‑M2/31‑49 (MQ=255) tgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:3229983‑M2/29‑48 (MQ=255) gtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:439671‑M2/28‑47 (MQ=255) gtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:3475238‑M2/28‑47 (MQ=255) gtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:700114‑M2/28‑47 (MQ=255) gtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:2012905‑M2/28‑47 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:1746367‑M2/27‑46 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:4901007‑M2/27‑46 (MQ=255) ttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGat > 1:10125‑M2/26‑50 (MQ=255) ttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGat > 1:3297406‑M2/26‑50 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatta > 1:5064801‑M2/24‑50 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatta > 1:294754‑M2/24‑50 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatt < 1:2491175‑M2/26‑1 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatt < 1:496094‑M2/26‑1 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatt < 1:4046780‑M2/26‑1 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattat < 1:1565648‑M2/28‑1 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatta < 1:2682803‑M2/27‑1 (MQ=255) atcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTc > 1:1588025‑M2/21‑50 (MQ=255) atcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTc > 1:5446205‑M2/21‑50 (MQ=255) tcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGGAGATTATTCt > 1:5576122‑M2/20‑50 (MQ=255) tcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCt > 1:2980664‑M2/20‑50 (MQ=255) tcattttcaaggagccgacCGAAACAGTTCGTCGGGCTAAAGATTATTCt < 1:4314612‑M2/31‑1 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCtt < 1:2752349‑M2/32‑1 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg < 1:2998060‑M2/33‑1 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg > 1:278147‑M2/18‑50 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg < 1:922924‑M2/33‑1 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg > 1:189372‑M2/18‑50 (MQ=255) ttttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgc < 1:1949184‑M2/34‑1 (MQ=255) tttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcg > 1:954587‑M2/16‑50 (MQ=255) tttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcg > 1:1449487‑M2/16‑50 (MQ=255) ttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcg < 1:3835107‑M2/35‑1 (MQ=255) ttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcg < 1:379227‑M2/35‑1 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGa > 1:249672‑M2/13‑50 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGa > 1:3662776‑M2/13‑50 (MQ=255) aaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAt > 1:3499022‑M2/12‑50 (MQ=255) aggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAtt > 1:364252‑M2/11‑50 (MQ=255) ggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAttt < 1:5114971‑M2/41‑1 (MQ=255) gagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTg < 1:2163145‑M2/42‑1 (MQ=255) gagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTg > 1:4317860‑M2/9‑50 (MQ=255) agccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGc < 1:709384‑M2/43‑1 (MQ=255) agccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGc < 1:4071089‑M2/43‑1 (MQ=255) gccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGcc < 1:5160299‑M2/44‑1 (MQ=255) gccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGcc > 1:3786952‑M2/7‑50 (MQ=255) gccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGcc > 1:4106951‑M2/7‑50 (MQ=255) ccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGcc > 1:4234230‑M2/6‑49 (MQ=255) gacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAt > 1:4074929‑M2/4‑50 (MQ=255) gacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAt < 1:4851415‑M2/47‑1 (MQ=255) acCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATc > 1:1733089‑M2/3‑50 (MQ=255) cCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg < 1:3335386‑M2/49‑1 (MQ=255) cCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg > 1:3186813‑M2/2‑50 (MQ=255) cCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg < 1:2408557‑M2/49‑1 (MQ=255) | GTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > NC_000913/2614748‑2614844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |