Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 111 [0] | [0] 113 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 389897 | 0 (0.000) | 108 (1.490) | 64/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A |
Only 100 of 111 total aligned reads displayed.
TAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTGGAGTTTGGTTGCGCTGCTA > NC_000913/389849‑389945 | tAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCtt > 1:1585432/1‑49 (MQ=255) tAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCtt < 1:5414882/49‑1 (MQ=255) aaTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTg < 1:4998153‑M1/49‑2 (MQ=255) aaTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTg > 1:3118814‑M1/1‑48 (MQ=255) aTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaa > 1:942104‑M1/1‑47 (MQ=255) aTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaa > 1:1260878‑M1/1‑47 (MQ=255) tAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaat < 1:1479506‑M1/50‑5 (MQ=255) tAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaat < 1:5353897‑M1/50‑5 (MQ=255) tAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaa > 1:3546049‑M1/1‑46 (MQ=255) aGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaata > 1:3449351‑M1/1‑45 (MQ=255) aGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaata > 1:2654470‑M1/1‑45 (MQ=255) gAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatat < 1:5021876‑M1/50‑7 (MQ=255) gAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaata < 1:5314344‑M1/49‑6 (MQ=255) aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatat > 1:47666‑M1/1‑43 (MQ=255) aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatat > 1:4765316‑M1/1‑43 (MQ=255) aaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatatta > 1:4883747‑M1/1‑42 (MQ=255) aCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattat < 1:5176267‑M1/50‑10 (MQ=255) aCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattat < 1:2046839‑M1/50‑10 (MQ=255) aCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattat < 1:4796059‑M1/50‑10 (MQ=255) aCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattat > 1:4858392‑M1/1‑41 (MQ=255) cAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatc > 1:4790911‑M1/1‑40 (MQ=255) cAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatc < 1:3938180‑M1/50‑11 (MQ=255) aGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcg > 1:4308279‑M1/1‑39 (MQ=255) gCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgg < 1:4638623‑M1/50‑13 (MQ=255) gCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgg < 1:2946281‑M1/50‑13 (MQ=255) cAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcggg < 1:817684‑M1/50‑14 (MQ=255) cAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcggg > 1:3443492‑M1/1‑37 (MQ=255) aataatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggc < 1:3732024‑M1/50‑15 (MQ=255) aataatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggc > 1:1490178‑M1/1‑36 (MQ=255) taatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgt > 1:4090454‑M1/1‑34 (MQ=255) taatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgt < 1:44145‑M1/50‑17 (MQ=255) taatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgt > 1:5475813‑M1/1‑34 (MQ=255) taatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgt > 1:328639‑M1/1‑34 (MQ=255) aatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgt > 1:386130‑M1/1‑33 (MQ=255) aatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgt > 1:1014121‑M1/1‑33 (MQ=255) aatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgt > 1:3739571‑M1/1‑33 (MQ=255) atTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgtta < 1:1735515‑M1/50‑19 (MQ=255) atTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgtt < 1:1780271‑M1/49‑18 (MQ=255) atTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgtt < 1:1232788‑M1/49‑18 (MQ=255) ttttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaa < 1:4690850‑M1/50‑20 (MQ=255) ttttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaa < 1:412912‑M1/50‑20 (MQ=255) ttttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaa < 1:2613884‑M1/50‑20 (MQ=255) ttttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgtta > 1:5092931‑M1/1‑31 (MQ=255) tttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaa > 1:671667‑M1/1‑30 (MQ=255) ttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaa > 1:5276084‑M1/1‑29 (MQ=255) ttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaa < 1:579761‑M1/49‑21 (MQ=255) tataTTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaa > 1:220269‑M1/1‑28 (MQ=255) tataTTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaa > 1:1995974‑M1/1‑28 (MQ=255) tataTTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaa < 1:2920963‑M1/49‑22 (MQ=255) atatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaata > 1:1748614‑M1/1‑27 (MQ=255) atatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaata > 1:1789242‑M1/1‑27 (MQ=255) atatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaata > 1:5178700‑M1/1‑27 (MQ=255) atatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaat < 1:2711323‑M1/49‑23 (MQ=255) atatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaat < 1:3250360‑M1/49‑23 (MQ=255) atatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaat < 1:320152‑M1/49‑23 (MQ=255) atatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaat < 1:4320115‑M1/49‑23 (MQ=255) tatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatat < 1:4608703‑M1/50‑25 (MQ=255) ttCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatatta > 1:3403210‑M1/1‑24 (MQ=255) ttCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatatt < 1:780961‑M1/49‑26 (MQ=255) ttCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatatt < 1:2025590‑M1/49‑26 (MQ=255) tCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatatta > 1:2593870‑M1/1‑23 (MQ=255) cACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattaca > 1:536458‑M1/1‑22 (MQ=255) cACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattac < 1:599138‑M1/49‑28 (MQ=255) cTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattacatt < 1:3439960‑M1/50‑31 (MQ=255) cTGAAAATATTTTTAATCTTgaatattatcaggcgttaaaatattacatt < 1:5522085‑M1/50‑31 (MQ=255) tGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattacattg > 1:4845420‑M1/1‑19 (MQ=255) tGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattacattg > 1:4666547‑M1/1‑19 (MQ=255) gAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattacattgt > 1:2346194‑M1/1‑18 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtg > 1:1018675‑M1/1‑17 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtg < 1:5145968‑M1/50‑34 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtg < 1:798374‑M1/50‑34 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtg > 1:4320919‑M1/1‑17 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattg < 1:3628422‑M1/48‑32 (MQ=255) aaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtgg < 1:79388‑M1/50‑35 (MQ=255) aaaTATTTTTAATCTTgaatattatcgggcgttaaaacattacattgtgg > 1:4104124‑M1/1‑16 (MQ=255) aaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggt > 1:840540‑M1/1‑15 (MQ=255) aaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggt < 1:3943678‑M1/50‑36 (MQ=255) aaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggt > 1:2273244‑M1/1‑15 (MQ=255) atTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggtttt > 1:3179475‑M1/1‑12 (MQ=255) tttttAATCTTgaatattatcgggcgttaaaatattacattgtggtttt < 1:1077577‑M1/49‑39 (MQ=255) tttttAATCTTgaatattatcgggcgttaaaatattacattgtggtttt < 1:2449623‑M1/49‑39 (MQ=255) tttttAATCTTgaatattatcgggcgttaaaatattacattgtggtttt < 1:3139832‑M1/49‑39 (MQ=255) tttttAATCTTgaatattatcgggcgttaaaatattacattgtggtttt < 1:3312554‑M1/49‑39 (MQ=255) tttAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaa > 1:5414853‑M1/1‑9 (MQ=255) ttAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaat > 1:401297‑M1/1‑8 (MQ=255) tAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaat < 1:2972998‑M1/49‑43 (MQ=255) aaTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc > 1:4766153‑M1/1‑6 (MQ=255) aaTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc > 1:3778207‑M1/1‑6 (MQ=255) aaTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc > 1:3907420‑M1/1‑6 (MQ=255) aaTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatg < 1:3245692‑M1/49‑44 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgcg < 1:5234833‑M1/50‑46 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgcg > 1:1202655‑M1/1‑5 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc < 1:3650212‑M1/49‑45 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc < 1:2026699‑M1/49‑45 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc < 1:2816852‑M1/49‑45 (MQ=255) cTTgaatattatcgggcgttaaaatattacattgtggttttcaatgcgt > 1:3791671‑M1/1‑3 (MQ=255) cTTgaatattatcgggcgttaaaatattacattgtggttttcaatgcgt > 1:3754975‑M1/1‑3 (MQ=255) ttgaatattatcgggcgttaaaatattacattgtggttttcaatgcgtta > 1:1882733‑M1/1‑2 (MQ=255) ttgaatattatcgggcgttaaaatattacattgtggttttcaatgcgtta > 1:141395‑M1/1‑2 (MQ=255) ttgaatattatcgggcgttaaaatattacattgtggttttcaatgcgtta > 1:4220741‑M1/1‑2 (MQ=255) | TAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTGGAGTTTGGTTGCGCTGCTA > NC_000913/389849‑389945 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |