| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,184,782 | Δ6,916 bp | ubiK–yqiI | ubiK, ygiL, yqiG, insC‑5, insD‑5, yqiG, yqiH, yqiI | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3184782 | 3191697 | 6916 | 84 [0] | [0] 84 | ubiK–yqiI | ubiK,ygiL,yqiG,insC‑5,insD‑5,yqiG,yqiH,yqiI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3184781 | 0 (0.000) | 80 (1.120) | 57/96 | 0.0 | 100% | intergenic (‑315/‑59) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| ? | NC_000913 | 3191698 = | 0 (0.000) | intergenic (+2/+41) | yqiI/glgS | putative fimbrial protein YqiI/surface composition regulator | |||||
CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGG > NC_000913/3184732‑3184830 | cGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT < 1:3023686‑M1/50‑1 (MQ=255)cGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT < 1:4437585‑M1/50‑1 (MQ=255)cGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT < 1:5108808‑M1/50‑1 (MQ=255) gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa < 1:234369‑M1/50‑2 (MQ=255) gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa > 1:3781545‑M1/1‑49 (MQ=255) gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa < 1:4849226‑M1/50‑2 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat > 1:815537‑M1/1‑48 (MQ=255) tAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc > 1:585892‑M1/1‑47 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatcta < 1:887906‑M1/50‑6 (MQ=255) tGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa > 1:2394753‑M1/1‑44 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata < 1:5055950‑M1/50‑9 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata < 1:2425001‑M1/50‑9 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata > 1:4639740‑M1/1‑42 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata > 1:532643‑M1/1‑42 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaat < 1:1503425‑M1/49‑8 (MQ=255) ttAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac < 1:3889469‑M1/50‑10 (MQ=255) aGCGGCAGCAACTCATAGCTTCACATAATTCTGGTTTATatctaataca < 1:4999636‑M1/49‑11 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca < 1:4896296‑M1/49‑11 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca < 1:314674‑M1/49‑11 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca > 1:4360956‑M1/1‑39 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca > 1:2171003‑M1/1‑39 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca < 1:1271543‑M1/49‑11 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa > 1:2766760‑M1/1‑38 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaa < 1:3748066‑M1/49‑12 (MQ=255) cGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaac < 1:4640361‑M1/50‑14 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:5318319‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:5435482‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:1180995‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:1534991‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca < 1:2019646‑M1/50‑15 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca < 1:2442261‑M1/50‑15 (MQ=255) gcagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac > 1:1665318‑M1/1‑35 (MQ=255) gcagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac < 1:3456076‑M1/50‑16 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac > 1:1659467‑M1/1‑34 (MQ=255) agcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact > 1:245730‑M1/1‑33 (MQ=255) gcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaa < 1:1870609‑M1/50‑19 (MQ=255) gcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacacta > 1:4311721‑M1/1‑32 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaa > 1:5267227‑M1/1‑31 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaa > 1:2384702‑M1/1‑31 (MQ=255) aaCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaa > 1:4496098‑M1/1‑30 (MQ=255) aaCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaa > 1:329484‑M1/1‑30 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac > 1:3140870‑M1/1‑29 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac < 1:1216265‑M1/50‑22 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac < 1:4845614‑M1/50‑22 (MQ=255) cGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacg > 1:3581183‑M1/1‑28 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg < 1:474782‑M1/50‑24 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg > 1:158402‑M1/1‑27 (MQ=255) cATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacggg < 1:518996‑M1/50‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc < 1:2755861‑M1/50‑26 (MQ=255) tAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:3196194‑M1/1‑24 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:3029467‑M1/1‑22 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:5509114‑M1/1‑22 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcca < 1:3764485‑M1/49‑28 (MQ=255) ttCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:797279‑M1/1‑20 (MQ=255) ttCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:4167266‑M1/1‑20 (MQ=255) tCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccatcag > 1:2466773‑M1/1‑19 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcagg > 1:1557621‑M1/1‑18 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:3948791‑M1/48‑31 (MQ=255) caTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcc < 1:4305851‑M1/50‑35 (MQ=255) caTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcc > 1:2673657‑M1/1‑16 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc > 1:2430509‑M1/1‑15 (MQ=255) tAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccg < 1:1388050‑M1/50‑37 (MQ=255) tAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccg > 1:3171000‑M1/1‑14 (MQ=255) tAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccg > 1:4885580‑M1/1‑14 (MQ=255) aaTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:2612250‑M1/1‑13 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtt < 1:1757378‑M1/50‑39 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:408004‑M1/1‑12 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:2228867‑M1/1‑12 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:2704614‑M1/1‑12 (MQ=255) ttCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta > 1:1164911‑M1/1‑11 (MQ=255) ttCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta < 1:1999214‑M1/50‑40 (MQ=255) ttCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta < 1:211811‑M1/50‑40 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttata > 1:501615‑M1/1‑9 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttat < 1:5224680‑M1/49‑41 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttat < 1:2144557‑M1/49‑41 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttat < 1:3286621‑M1/49‑41 (MQ=255) tGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:2760871‑M1/1‑8 (MQ=255) ggTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:3391084‑M1/1‑7 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatatc < 1:1787231‑M1/49‑44 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:5335636‑M1/1‑6 (MQ=255) tatatctaatacaaacactaaaacgggccatcaggcccgttatatcagtg > 1:5477762‑M1/1‑3 (MQ=255) tatatctaatacaaacactaaaacgggccatcaggcccgttatatcagtg > 1:2415758‑M1/1‑3 (MQ=255) atatctaatacaaacactaaaacgggccatcaggcccgttatatcagtg < 1:1415053‑M1/49‑48 (MQ=255) tatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgct < 1:4527839‑M1/50‑50 (MQ=255) | CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGG > NC_000913/3184732‑3184830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |