| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 85 [0] | [0] 86 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 82 (1.180) | 50/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGATGTTCA > NC_000913/729315‑729412 | aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:670626‑M1/50‑1 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc > 1:3935146‑M1/1‑49 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc > 1:1590181‑M1/1‑49 (MQ=255) aaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcg > 1:3297801‑M1/1‑48 (MQ=255) ggCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc < 1:794045‑M1/50‑5 (MQ=255) ggCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc < 1:1805867‑M1/50‑5 (MQ=255) gCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtct < 1:2981670‑M1/50‑6 (MQ=255) gCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc > 1:3558234‑M1/1‑45 (MQ=255) cAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta > 1:3243129‑M1/1‑44 (MQ=255) aaCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta > 1:3225904‑M1/1‑43 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca > 1:854314‑M1/1‑42 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca < 1:254076‑M1/50‑9 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca > 1:169501‑M1/1‑42 (MQ=255) tGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:672708‑M1/1‑40 (MQ=255) tGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:5142691‑M1/1‑40 (MQ=255) ggTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:4946723‑M1/1‑39 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactta > 1:468579‑M1/1‑38 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact < 1:3429164‑M1/48‑11 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactc < 1:1605975‑M1/50‑16 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttact < 1:1727660‑M1/49‑15 (MQ=255) tttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcc < 1:5129308‑M1/50‑17 (MQ=255) tttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcc < 1:3897867‑M1/50‑17 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 1:1607332‑M1/1‑32 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcct < 1:4209250‑M1/49‑18 (MQ=255) ttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 1:1285429‑M1/1‑31 (MQ=255) ttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg < 1:1850161‑M1/49‑19 (MQ=255) tATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctgt > 1:2894173‑M1/1‑30 (MQ=255) attgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgta > 1:4048979‑M1/1‑29 (MQ=255) attgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgta > 1:2941996‑M1/1‑29 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaa > 1:360831‑M1/1‑28 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaa > 1:3716729‑M1/1‑28 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaa > 1:3741419‑M1/1‑28 (MQ=255) gattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc > 1:130491‑M1/1‑26 (MQ=255) gattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc > 1:4304500‑M1/1‑26 (MQ=255) gattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaac < 1:1819889‑M1/49‑24 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccg > 1:443914‑M1/1‑25 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc < 1:1716979‑M1/49‑25 (MQ=255) ttgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgc > 1:2503294‑M1/1‑24 (MQ=255) tgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:3762562‑M1/1‑23 (MQ=255) tgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:529641‑M1/1‑23 (MQ=255) gCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:1773779‑M1/1‑22 (MQ=255) gCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:3564708‑M1/1‑22 (MQ=255) gCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:1309690‑M1/1‑22 (MQ=255) gCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:4527380‑M1/1‑22 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctca < 1:4655960‑M1/50‑30 (MQ=255) gAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:2186934‑M1/1‑19 (MQ=255) gAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:4327367‑M1/1‑19 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:5354318‑M1/1‑18 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:976070‑M1/1‑18 (MQ=255) gTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 1:1550639‑M1/1‑17 (MQ=255) gTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagaag > 1:3176433‑M1/1‑17 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagc < 1:734753‑M1/50‑35 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagc < 1:1113953‑M1/50‑35 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagc < 1:4256031‑M1/50‑35 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagc < 1:5542156‑M1/50‑35 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 1:1041069‑M1/1‑16 (MQ=255) tttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 1:4775656‑M1/1‑15 (MQ=255) ttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcag > 1:1832265‑M1/1‑14 (MQ=255) tGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcag > 1:3207806‑M1/1‑13 (MQ=255) tGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcag > 1:1052549‑M1/1‑13 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt < 1:3958538‑M1/49‑38 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaa < 1:1917584‑M1/50‑40 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaa > 1:3520671‑M1/1‑11 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaa > 1:4795400‑M1/1‑11 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagta < 1:2473429‑M1/49‑39 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagta < 1:149900‑M1/49‑39 (MQ=255) aTACATTGAAcgtctacacttactcctgtaaaccgcttaggagcagtaat > 1:1793025‑M1/1‑10 (MQ=255) aTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat > 1:2210619‑M1/1‑10 (MQ=255) aTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat > 1:673476‑M1/1‑10 (MQ=255) aTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat > 1:3022900‑M1/1‑10 (MQ=255) aTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat > 1:5390637‑M1/1‑10 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg < 1:4661899‑M1/50‑42 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat > 1:2880112‑M1/1‑9 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat > 1:5075532‑M1/1‑9 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat > 1:1705209‑M1/1‑6 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat > 1:1235592‑M1/1‑6 (MQ=255) ttGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatc < 1:4698215‑M1/50‑46 (MQ=255) ttGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatc < 1:3096536‑M1/50‑46 (MQ=255) gAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatcta > 1:948167‑M1/1‑3 (MQ=255) gAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatcta > 1:2056909‑M1/1‑3 (MQ=255) gAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatct < 1:10436‑M1/49‑47 (MQ=255) gAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatct < 1:4545103‑M1/49‑47 (MQ=255) gAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatct < 1:1277347‑M1/49‑47 (MQ=255) aacgtctacacttactcctgtaaaccgctcaggagcagtaatgaatctac < 1:5360350‑M1/50‑49 (MQ=255) aacgtctacacttactcctgtaaaccgctcaggagcagtaatgaatcta < 1:5166254‑M1/49‑48 (MQ=255) | AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGATGTTCA > NC_000913/729315‑729412 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |