| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 85 [0] | [0] 86 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 82 (1.180) | 50/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACAA > NC_000913/738914‑739012 | aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 1:3935146‑M2/50‑50 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 1:1590181‑M2/50‑50 (MQ=255) aaggcaactggtgatttttattgattgctgagttttgaatacattgaaCg > 1:3297801‑M2/49‑50 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc < 1:794045‑M2/4‑1 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc < 1:1805867‑M2/4‑1 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 1:3558234‑M2/46‑49 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTCt < 1:2981670‑M2/5‑1 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:3243129‑M2/45‑50 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:3225904‑M2/44‑49 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca > 1:854314‑M2/43‑50 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca < 1:254076‑M2/8‑1 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca > 1:169501‑M2/43‑50 (MQ=255) tggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:5142691‑M2/41‑50 (MQ=255) tggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:672708‑M2/41‑50 (MQ=255) ggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:4946723‑M2/40‑49 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt < 1:3429164‑M2/10‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTa > 1:468579‑M2/39‑50 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt < 1:1727660‑M2/14‑1 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTc < 1:1605975‑M2/15‑1 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc < 1:5129308‑M2/16‑1 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc < 1:3897867‑M2/16‑1 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt < 1:4209250‑M2/17‑1 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:1607332‑M2/33‑50 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:1285429‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg < 1:1850161‑M2/18‑1 (MQ=255) tattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGt > 1:2894173‑M2/31‑49 (MQ=255) attgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTa > 1:2941996‑M2/30‑49 (MQ=255) attgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTa > 1:4048979‑M2/30‑49 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaaa > 1:360831‑M2/29‑50 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaaa > 1:3716729‑M2/29‑50 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaaa > 1:3741419‑M2/29‑50 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc > 1:4304500‑M2/27‑50 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc > 1:130491‑M2/27‑50 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc < 1:1819889‑M2/23‑1 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc < 1:1716979‑M2/24‑1 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCg > 1:443914‑M2/26‑50 (MQ=255) ttgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGc > 1:2503294‑M2/25‑50 (MQ=255) tgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:3762562‑M2/24‑50 (MQ=255) tgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:529641‑M2/24‑50 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:4527380‑M2/23‑49 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:1773779‑M2/23‑49 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:1309690‑M2/23‑49 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:3564708‑M2/23‑49 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCa < 1:4655960‑M2/29‑1 (MQ=255) gagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:4327367‑M2/20‑49 (MQ=255) gagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:2186934‑M2/20‑49 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:5354318‑M2/19‑48 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:976070‑M2/19‑48 (MQ=255) gttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:1550639‑M2/18‑50 (MQ=255) gttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGAAg > 1:3176433‑M2/18‑50 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:1041069‑M2/17‑49 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGc < 1:734753‑M2/34‑1 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGc < 1:1113953‑M2/34‑1 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGc < 1:5542156‑M2/34‑1 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGc < 1:4256031‑M2/34‑1 (MQ=255) tttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:4775656‑M2/16‑48 (MQ=255) ttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:1832265‑M2/15‑50 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:3207806‑M2/14‑49 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:1052549‑M2/14‑49 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt < 1:3958538‑M2/37‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa < 1:1917584‑M2/39‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 1:3520671‑M2/12‑50 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 1:4795400‑M2/12‑50 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTa < 1:149900‑M2/38‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTa < 1:2473429‑M2/38‑1 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTTAGGAGCAGTAAt > 1:1793025‑M2/11‑50 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:2210619‑M2/11‑50 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:673476‑M2/11‑50 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:3022900‑M2/11‑50 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:5390637‑M2/11‑50 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:2880112‑M2/10‑49 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:5075532‑M2/10‑49 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg < 1:4661899‑M2/41‑1 (MQ=255) attgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAt > 1:1705209‑M2/7‑50 (MQ=255) attgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAt > 1:1235592‑M2/7‑50 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc < 1:4698215‑M2/45‑1 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc < 1:3096536‑M2/45‑1 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCt < 1:1277347‑M2/46‑1 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCt < 1:4545103‑M2/46‑1 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCt < 1:10436‑M2/46‑1 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:948167‑M2/4‑50 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:2056909‑M2/4‑50 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa < 1:5166254‑M2/47‑1 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAc < 1:5360350‑M2/48‑1 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACaa < 1:2097613/50‑1 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACaa < 1:382809/50‑1 (MQ=255) | AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACAA > NC_000913/738914‑739012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |