| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 61 [0] | [0] 61 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 61 (0.840) | 46/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCG > NC_000913/2204303‑2204398 | aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga < 1:1452903‑M1/50‑4 (MQ=255)aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga > 1:2899946‑M1/1‑47 (MQ=255)aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtg < 1:3652901‑M1/49‑3 (MQ=255) ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgac > 1:3430334‑M1/1‑46 (MQ=255) tCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc > 1:57161‑M1/1‑45 (MQ=255) cAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc > 1:4203474‑M1/1‑44 (MQ=255) cAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc > 1:1141587‑M1/1‑44 (MQ=255) aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccga < 1:5212453‑M1/50‑8 (MQ=255) aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa > 1:2149504‑M1/1‑42 (MQ=255) aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat > 1:1555645‑M1/1‑41 (MQ=255) aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat < 1:4273812‑M1/50‑10 (MQ=255) ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg < 1:4854374‑M1/50‑11 (MQ=255) tGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc > 1:1504288‑M1/1‑39 (MQ=255) ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc < 1:1524663‑M1/49‑12 (MQ=255) gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg > 1:2621230‑M1/1‑37 (MQ=255) tCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcgga > 1:4022647‑M1/1‑36 (MQ=255) ccGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac > 1:5558335‑M1/1‑35 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacc < 1:5135137‑M1/50‑17 (MQ=255) cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac > 1:4391268‑M1/1‑34 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccac < 1:4005575‑M1/50‑19 (MQ=255) aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccac < 1:1710872‑M1/50‑19 (MQ=255) tCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccaca < 1:3379177‑M1/50‑20 (MQ=255) ccGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacat > 1:5116169‑M1/1‑30 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt < 1:3277855‑M1/50‑22 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt < 1:1081190‑M1/50‑22 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt > 1:2544059‑M1/1‑29 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt < 1:2065380‑M1/50‑22 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt < 1:2004376‑M1/50‑22 (MQ=255) cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt < 1:762651‑M1/50‑22 (MQ=255) ggCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattc < 1:3017439‑M1/50‑23 (MQ=255) gcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcaca > 1:2022030‑M1/1‑25 (MQ=255) gcAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcaca > 1:1950265‑M1/1‑25 (MQ=255) aaCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatc < 1:2818046‑M1/50‑28 (MQ=255) aaCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat > 1:208851‑M1/1‑23 (MQ=255) aCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatca < 1:1722081‑M1/50‑29 (MQ=255) tCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcattt < 1:3990313‑M1/50‑32 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct < 1:3078859‑M1/50‑34 (MQ=255) ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct < 1:1817954‑M1/50‑34 (MQ=255) aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta > 1:951917‑M1/1‑15 (MQ=255) aTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttac < 1:2862327‑M1/50‑37 (MQ=255) tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg < 1:118398‑M1/50‑38 (MQ=255) tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg > 1:2904239‑M1/1‑13 (MQ=255) gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcg < 1:3690610‑M1/50‑40 (MQ=255) gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgc < 1:2804526‑M1/49‑39 (MQ=255) gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgc < 1:2675807‑M1/49‑39 (MQ=255) ccTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgc < 1:1801078‑M1/50‑41 (MQ=255) ggATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgta > 1:397393‑M1/1‑7 (MQ=255) ggATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgta > 1:2559491‑M1/1‑7 (MQ=255) ggATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgta > 1:4819366‑M1/1‑7 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgtat < 1:1052000‑M1/50‑45 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgtat > 1:2555630‑M1/1‑6 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgtat < 1:4474904‑M1/50‑45 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgta < 1:4519759‑M1/49‑44 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgta < 1:3696576‑M1/49‑44 (MQ=255) gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgt < 1:4098365‑M1/48‑43 (MQ=255) attattgaccgaatgcggaccacattcacatcatttcttacgcgcgtatt > 1:475909‑M1/1‑5 (MQ=255) attattgaccgaatgcggaccacattcacatcatttcttacgcgcgtatt > 1:2863909‑M1/1‑5 (MQ=255) attattgaccgaatgcggaccacattcacatcatttcttacgcgcgtatt > 1:2179275‑M1/1‑5 (MQ=255) attgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttc < 1:4825411‑M1/49‑48 (MQ=255) attgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt > 1:119595‑M1/1‑2 (MQ=255) ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttcag < 1:3945359‑M1/50‑50 (MQ=255) | ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCG > NC_000913/2204303‑2204398 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |